Os03g0594700

From RiceWiki
Revision as of 19:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0594700

Description

Conserved hypothetical protein

Version

NM_001057128.1 GI:115453984 GeneID:4333367

Length

6053 bp

Definition

Oryza sativa Japonica Group Os03g0594700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22870583..22876635

Sequence Coding Region

22870961..22871113,22871209..22871307,22872475..22872788,22872883..22872958,22873050..22874398
,22874606..22875206

Expression

GEO Profiles:Os03g0594700

Genome Context

<gbrowseImage1> name=NC_008396:22870583..22876635 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22870583..22876635 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctggtgctgcttgcaaaaagactaacctgatttctcctaggcgatctcctaggctcaagaatatccatgttatatatggtgaacattctgaaacgaactatcctaccttggggcctgtcaaaactgaggtcatcgatcttgaagaaattgcatctccttccaacccagaatttaatgatgattctgttggtgacgaagactttcagaatgtgtctctgaaggatttaagagctcagtgtaaagctaagaacaggagggccttgaaagttgattctgaaagacctgactttaagaatcagagacaatgtggaaagagaaaccttgaagatgaagtaccaaaagaggaagttgatcttgatgagcccattattgcattcagacagaagcggcagaagacatcccctaccaaatcaaacagaacaatgggcaaaccaatatctctaaatgctgtaaaactgcaagatacaacattgaggagagaggagactgagcctataaaattacccccacttgaggtaacatcacatgactctatgtcaactgcagagaagatggaaaggagtgctgcagatgtaaaacactccacaattgctgctggtaatactgaagaaatagttggggagaacattttatatgctgaaatggaaaacacaccattatcaactggtgctgtaataagtggtagaagcccagacatattttgcgaaatcaagactgaggatgaggatatttactctgatgagcaagttggagtatctagtccaggaaaggactcctttcaggactcatttgctgagttgcatagggagccaatagagtatgatggatgtcaacaacacagtggtgtcatccctcaaccgattgaactaaaggatgtttctgatgattcctgtgagctagctaacagtatcaaagcatactgtttggatgacattatactgcaaaacaagacaaatgacagtctttcttcattggatatcactgatgaaatgagcaactgccataaaacatcaggcaatataacaaatttagatgaagacaagtcttcagttgtcaatgattatttggtatgttctgttaatatgtcttgtgaagatcatatagacattgatgaatactggtatccacgagatctacatggcagtacactggaaagcacaaagactatagaaagttctactgatcagtgtaacgcagaggtggggtctccatccgtggtcatccaatctgatttatgtggaagtgcagaaagcaacttcacgtcgcttgcagaggttgtgcagatgaaggcagatggtcaatttgattcactagttcagcacagtgttggaacaaaggatgtattacctattgatgttggacatgcaactatcgattgcacttttgcttttaacaagactcttgactcagtgaaagctgccaattttaccacacaagatggacggctagaaagtatagtatatgatgctctgaataatcatgcacagaggaagagtactgaaactgaaactcctgttggtgtctcaggtgctgccatcatttcaagcccattcgtaagtgagggcactgacagagaacccactggatccaaagctccacatggtggtcagctcttacttccttgtgttacagagtggttatcaaaggatacagatcagttaaaggttacagtggatgatgacatctgtaaaactaacagtgatcaaggatcaagagaacaatttggccttcagccgcagttattacaatcttgttctgacttggacaaagtttgtgtaacatcagagagctcgagtcctgaagaaacacaggaaatgcctgctgggtctttggattcaactgcagcctctctcgatactgatggacaaagtgaaaagttacaacctttcattgatgaaggagctcttgaagagcatgctccaaaaaaactgctgtccaagagaaagattatgtccccgacttctcaggagaagctttgcagtgctttgactggtattgatttgtgcggggtccaaaggctcaagagaaagatccttcttgaagattgtggcaagacgaggagacccaatggcaggagttccctctcccctacaagcaaaggaattctgaagggaacagaatccccatccccccaaaagactacttgtacttgcatgaaagctgcttcagttatattggacgccgagaaggctgttgagttttcacaaaggcaaatgcatgatatagaaaacattgcatccaaacttatgagaagcttgaatcacatgagaagtatagtagacggaaatttgttatcagaatcacattctttgctacctactttcaacactgctgagatcagagcagcctctgaggatgcattagaggtggagagaactacaaggaaatggttgacaataatgaacaaagattgcaatcgcttttgtaaaatactgagattagcagggaagaaggctgtttctcattctgaagttccaagaaaacgaaagaagataacatttgccgatgaaactggaggaaagctctgtcatgttaagatgtttactgatggacaaaactctcttctttctgaatgccatagcgagtaa</cdnaseq>

Protein Sequence

<aaseq>MPGAACKKTNLISPRRSPRLKNIHVIYGEHSETNYPTLGPVKTE VIDLEEIASPSNPEFNDDSVGDEDFQNVSLKDLRAQCKAKNRRALKVDSERPDFKNQR QCGKRNLEDEVPKEEVDLDEPIIAFRQKRQKTSPTKSNRTMGKPISLNAVKLQDTTLR REETEPIKLPPLEVTSHDSMSTAEKMERSAADVKHSTIAAGNTEEIVGENILYAEMEN TPLSTGAVISGRSPDIFCEIKTEDEDIYSDEQVGVSSPGKDSFQDSFAELHREPIEYD GCQQHSGVIPQPIELKDVSDDSCELANSIKAYCLDDIILQNKTNDSLSSLDITDEMSN CHKTSGNITNLDEDKSSVVNDYLVCSVNMSCEDHIDIDEYWYPRDLHGSTLESTKTIE SSTDQCNAEVGSPSVVIQSDLCGSAESNFTSLAEVVQMKADGQFDSLVQHSVGTKDVL PIDVGHATIDCTFAFNKTLDSVKAANFTTQDGRLESIVYDALNNHAQRKSTETETPVG VSGAAIISSPFVSEGTDREPTGSKAPHGGQLLLPCVTEWLSKDTDQLKVTVDDDICKT NSDQGSREQFGLQPQLLQSCSDLDKVCVTSESSSPEETQEMPAGSLDSTAASLDTDGQ SEKLQPFIDEGALEEHAPKKLLSKRKIMSPTSQEKLCSALTGIDLCGVQRLKRKILLE DCGKTRRPNGRSSLSPTSKGILKGTESPSPQKTTCTCMKAASVILDAEKAVEFSQRQM HDIENIASKLMRSLNHMRSIVDGNLLSESHSLLPTFNTAEIRAASEDALEVERTTRKW LTIMNKDCNRFCKILRLAGKKAVSHSEVPRKRKKITFADETGGKLCHVKMFTDGQNSL LSECHSE</aaseq>

Gene Sequence

<dnaseqindica>5523..5675#5329..5427#3848..4161#3678..3753#2238..3586#1430..2030#gggaggaaaaaccctagtactcaaaattccattccacaaactccctcccttctctgccgccaagaacgccgcctccgcctcatccgccgccgccgcctcccctccaccagcgccagccaccgcctccattcccccactaccgccgccgccgccgccgcttcccatccctgcaaattacatcgcccctctcgaccgttgtacggcgcgctgtccagatccgccgcccagcctccaggtacgcccttactccctctccatggcgctgccctcctcctccgccaagaagcttacttacgggtttgttgcctcctcccctccgtgcaagatctgccgccacgtgcccctgcccctgccccgctacaagatccggcggcacgcactctctccctgcaagatccggcaaggacatcgagggactcttcatcttagttttgcggtcagcacttttgagaggaaccagatgggactctagttttgttgtagagaggaatcctttactttttgatagagaaggttatatgtaagtgcctgatttcaattcctacagatttagtatattaacattgcttatacctgatactgtatttttttaaaaaagcatgtcagatgtgatggcgcacactcattcaaattttctagggtgttttcagaaatttgctgattttccaaagaaattttgaattgtaccatacaatattttgaattttctgcaatgctatcgttaatccctatagactcatttcaaacctgatttttttattgcaatttgaattttttacaacacaatctttaaagtttgtaacttctatacttaaatgttactccagagtcatcccctaatccccacgttccaaacatgtgaaatgcaaatctcagggtgaaaggggattgggtggtgggaggggattaacccaatcccccccccttgggtgaatctccctggggaaatcccccccctccccccttgttgctgaacgaagccttattgattcactctagcactaagtttcccgtatgtttattagaagcattcctgtgtaatcacaaaattgattattgcaaaaccacttgctactttctatgtctttttttcctgttatttttataatatgtgcaccttatttttctgttctatgatgggaaataggagagctaatgataatgtcccagcatatattatgatttcgtaatgacacgatttgcctattatcctgctctagtgctttaattgaatatgaccctgtttcatctagaaaaagaatatgtttcatcttaaagataatatggcttctgttattcatctattgtgcatacatttggtcataacatctggttttcttcactcctgcaggaaactttttgacatttacaattgccaagttgatttcgatacaagtttgaatctgtagtctgctacttgaaagtgacaatgcctggtgctgcttgcaaaaagactaacctgatttctcctaggcgatctcctaggctcaagaatatccatgttatatatggtgaacattctgaaacgaactatcctaccttggggcctgtcaaaactgaggtcatcgatcttgaagaaattgcatctccttccaacccagaatttaatgatgattctgttggtgacgaagactttcagaatgtgtctctgaaggatttaagagctcagtgtaaagctaagaacaggagggccttgaaagttgattctgaaagacctgactttaagaatcagagacaatgtggaaagagaaaccttgaagatgaagtaccaaaagaggaagttgatcttgatgagcccattattgcattcagacagaagcggcagaagacatcccctaccaaatcaaacagaacaatgggcaaaccaatatctctaaatgctgtaaaactgcaagatacaacattgaggagagaggagactgagcctataaaattacccccacttgaggtaacatcacatgactctatgtcaactgcagagaagatggaaaggagtgctgcagatgtaaaacactccacaattgctgctggtgagtcttttcttatccaaacatactgcagtctttcaatacaaatacccttttttcagtatagatgcaacatatgaatgaactggatgtagcagatgaatctgcaaaacctcttattttcgccagtacatttttcttgaaatagacctacttaggttcctttttttcaaacatattgtaaatgctgtgtatgttctttattttcaggtaatactgaagaaatagttggggagaacattttatatgctgaaatggaaaacacaccattatcaactggtgctgtaataagtggtagaagcccagacatattttgcgaaatcaagactgaggatgaggatatttactctgatgagcaagttggagtatctagtccaggaaaggactcctttcaggactcatttgctgagttgcatagggagccaatagagtatgatggatgtcaacaacacagtggtgtcatccctcaaccgattgaactaaaggatgtttctgatgattcctgtgagctagctaacagtatcaaagcatactgtttggatgacattatactgcaaaacaagacaaatgacagtctttcttcattggatatcactgatgaaatgagcaactgccataaaacatcaggcaatataacaaatttagatgaagacaagtcttcagttgtcaatgattatttggtatgttctgttaatatgtcttgtgaagatcatatagacattgatgaatactggtatccacgagatctacatggcagtacactggaaagcacaaagactatagaaagttctactgatcagtgtaacgcagaggtggggtctccatccgtggtcatccaatctgatttatgtggaagtgcagaaagcaacttcacgtcgcttgcagaggttgtgcagatgaaggcagatggtcaatttgattcactagttcagcacagtgttggaacaaaggatgtattacctattgatgttggacatgcaactatcgattgcacttttgcttttaacaagactcttgactcagtgaaagctgccaattttaccacacaagatggacggctagaaagtatagtatatgatgctctgaataatcatgcacagaggaagagtactgaaactgaaactcctgttggtgtctcaggtgctgccatcatttcaagcccattcgtaagtgagggcactgacagagaacccactggatccaaagctccacatggtggtcagctcttacttccttgtgttacagagtggttatcaaaggatacagatcagttaaaggttacagtggatgatgacatctgtaaaactaacagtgatcaaggatcaagagaacaatttggccttcagccgcagttattacaatcttgttctgacttggacaaagtttgtgtaacatcagagagctcgagtcctgaagaaacacaggaaatgcctgctgggtctttggattcaactgcagcctctctcgatactgatggacaaagtgaaaagttacaacctttcattgatgaaggagctcttgaagagcatgctccaaaaaaactgctgtccaagagaaaggtctgctctcattgttttaacctaaccttgaaacaaaaaatgtatgaataaatctgccatacttattttccctttttttattttttttaagattatgtccccgacttctcaggagaagctttgcagtgctttgactggtattgatttgtgcggggtccaaaggctcagtaagcaatctatgctgtttgtagtgtttctaatattttttataagagtagttaatactatttcccattattgatgcggccattattctttcagagagaaagatccttcttgaagattgtggcaagacgaggagacccaatggcaggagttccctctcccctacaagcaaaggaattctgaagggaacagaatccccatccccccaaaagactacttgtacttgcatgaaagctgcttcagttatattggacgccgagaaggctgttgagttttcacaaaggcaaatgcatgatatagaaaacattgcatccaaacttatgagaagcttgaatcacatgagaagtatagtagacggaaatttgttatcagaatcacattctttgctacctactttcaacactgctgaggtgagtattaataaatggaatttgagcatactattttgagttgcatttaattttgctgctctgtgattaattgatgattctagaatatagctaggctgtagtaatcatgattcatgaagttacaccgtacacactttaataggtagggcagaagtataaagttgagttttcattagctaaagaaatgaagtcacactgttagacactggagcacaaaaatatatttctcagtataataattctagttcaaatattaatactggttgaagaatccttacttggatatccaaagttccgcaggaaatttcagataccccataaacataagagtctgcatttgtgtttgcacttcattagcgccttagttatttttatgtaaatatcacataagtacctatctaagcttgtggaccagctattatattgtaggatcagtacaagagtctcgttgcatagaatcaccgtggactaatctgcagttatactgtcatacaaggaattatgtcccatcttacaaccgcatttcacgaatgtccaaaaaacaactctatttttaatagtagttcaggttcgaacaagtgcacagtatagaagttcaagttgtttttagtctttgaaagttcagggttgtcaaatagactattcctaaaaaggagcatattcctgactggcttatcaacacttaacatatgtacttcatacctttgtcctattaatagtgcaggtgtaacttttcatctgttttcaactagtgattactcctaactttcaaaaaagttccatgtttcacattataagacattttgggttttgaatagattcatgcatggatctatgtatgtgcttcatatatgtgtccaaatttatatggatgttagtgaatctagggatggggaggccaaaacatcttataatgtggaacagagggagtagtactttatttgccataagaaattgtgaactaactctgatatgataagattgttgaaattgatattaaccatgatgagcagtagcttcctggtagtcttgttcataatatgaaaaatgagaagatttgagagttgagcctatagatttgtttgctgccaatctggtcttagctgagagtgaagcaaatctaccttgatatttatttgacagcaatcttataattctcttgcgcagatcagagcagcctctgaggatgcattagaggtggagagaactacaaggaaatggttgacaataatgaacaaagattgcaatcgcttttgtaaaatactggttggtatctgcttttaagtttgtatgctaactttggagtattgagtgttttcctgaactcgactgacattttcaatttaaatgttcaatgccagagattagcagggaagaaggctgtttctcattctgaagttccaagaaaacgaaagaagataacatttgccgatgaaactggaggaaagctctgtcatgttaagatgtttactgatggacaaaactctcttctttctgaatgccatagcgagtaacatcatttctactagttgctatcacggacattgatgataacaatgtaagctttctgataaacaagagatcaaacaagctgctcgcaatcggattgtagtggaaggagaatgcttccgttcattgtaagatgtagatgcaacaaaaaactagtgtttgttagctgtaaagccttggaatttactgggattaggctgacaacattgccagcgcgatattgttttcctgtcctatttgtttggatgcaaaaggtcatgtaattcatgtaaagcagcttgggaattgcttgatttgaaggtcacattgtaatctgtaaacaagaattgacctgctgtaatatgattattgttgtcctcttattccatgacatattttcaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0594700, RefSeq:Os03g0594700