Os05g0141400

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Revision as of 10:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0141400| Description = contains InterPro domain(s): IPR001537| Version = NM_001061139.1 GI:115462008 GeneID:4337763| Length = 3044 bp| Def...")
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Gene Name

Os05g0141400

Description

contains InterPro domain(s): IPR001537

Version

NM_001061139.1 GI:115462008 GeneID:4337763

Length

3044 bp

Definition

Oryza sativa Japonica Group Os05g0141400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2356836..2359879

Sequence Coding Region

2357087..2357304,2358281..2358407,2359377..2359481,2359605..2359829

Expression

GEO Profiles:Os05g0141400

Genome Context

<gbrowseImage1> name=NC_008398:2356836..2359879 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2356836..2359879 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggcggcggtggagagcgtggtggtggtgcacaacgtggcgaagcggcacaacgtggggacgctggcgcggagcgcgacggcgttcggggtggcggaggtggtggtcgtcggccgccgcgacgtcagcgccttcggcagccacggcgccacctcccacctccgcttccgccacttcgcctccctccccctcgcccgcgcctacctcaaggacgagagggggtgtgacatttgcggcgtggagatcacccacaacgcgctgccggtgacggcccatccgttccgccggagcaccgccttcctcttcggcaatgagggtacaggactctcgcagaaggagtgcgagatctgcgacttttttgtctacatccctcagtatggtggtggaaccgcatcattgaatgttacagttgcagcgtcgattgttcttcatcactttggagtctgggctggctttccagaacgagggcgagaaggtaataaattcgttgtagctgataaaccaaagggccaatctaggggactctactgtacagactcaattgaagaagtgattgaagaacggaagatgcgaagagaaaatgcctgtgacatatttgaggaaaatggaagtagcgagcatcaggaatcaaatgttttaggcacgatgctgtcagactag</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAVESVVVVHNVAKRHNVGTLARSATAFGVAEVVVVGR RDVSAFGSHGATSHLRFRHFASLPLARAYLKDERGCDICGVEITHNALPVTAHPFRRS TAFLFGNEGTGLSQKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFPER GREGNKFVVADKPKGQSRGLYCTDSIEEVIEERKMRRENACDIFEENGSSEHQESNVL GTMLSD</aaseq>

Gene Sequence

<dnaseqindica>2576..2793#1473..1599#399..503#51..275#gaattaaaagcaaaaaaaaaaggaaaataaaggagaaaagagtggcggccatggcggcggcggcggcggcggcggtggagagcgtggtggtggtgcacaacgtggcgaagcggcacaacgtggggacgctggcgcggagcgcgacggcgttcggggtggcggaggtggtggtcgtcggccgccgcgacgtcagcgccttcggcagccacggcgccacctcccacctccgcttccgccacttcgcctccctccccctcgcccgcgcctacctcaaggtccaccaaccccgatatccgagctaccaacccagccctccctctctctctaaaccctaaaccctaaaccctaatcctctcccttccattcctgctgcctgacatacgcgcgtgtgtgtgcaggacgagagggggtgtgacatttgcggcgtggagatcacccacaacgcgctgccggtgacggcccatccgttccgccggagcaccgccttcctcttcggcaatgaggtgggtgggtcggattttctcatgattcctcattaattttgagtacttctgcttgtatgacacaaattcaattgactctgtggaattagtactagtttgcaggcagatatgtgtatcagttgccaatttacttacacgtccaaattctgttggaattttgacccttttttgtgatcccttggaatcctgagtggatgttagctccacttgagttttatgagcgtcgtaatgtttactaaaacacaataaaaaccgctagtgaaaaagaggagagaagtatattggtgccgtcacaatgacaaaattatggaaataccataacaaatgtgattgactacctgataccgcagaaaataccgttgctgtcacggttccacccttttcggggcatttgggtgaggaaatttcaataatgtcaaattgacggcagtgccttgagctattcagctgttgctcaatggatgtggattattgttcacccctgatgagtaatgaatgcagatctaatgtcatcaatgtcttccataatttttaggcttttctgtctgtatgggggactgttccagtgtccccaatgtattttttctaaacatcagtttgtgatagctattctagttttctcaaaagaaaaaaaaggccagtgccagtacaggaggggtgaggaaagattggcatgagttgctagcactagcataatagtgaaagtgtgagaccttttagacttgatacacgtgtgaactgcaggctttgtttcaactcaaggtgaccattacttgctagggcaatacttcattgtactatatttaaatatatggtgttatactgttaaattcattttctccagtttgtagatcatattcaatggatgactaggataaaactgaagtgggatgtaattcctttgaataaacaagagcaatttgcatgccctttatattataatttcctattttttattgcatctagtagggtacaggactctcgcagaaggagtgcgagatctgcgacttttttgtctacatccctcagtatggtggtggaaccgcatcattgaatgttacagttgcagcgtcgattgttcttcatcactttggaggtaaggtgacatccttcaattaatgcaacacaggtcaagttagtcaaacaaaatgtaaacaaatgtaaataacaaatactcacattaaatttcctttgttgtcttttaacctcacctttctgtagaattgtagaatatcaagtttccatgttcctcgtctaaataatctattctctctctgccaaacatgtttttctggaaatacttgggatatagtaacagaaaggcatgccatatgtctagtccaaaatcttcttttggggaatttatttgttgctcaaatcaaatttgatattccccttttattctatttcctaatgtactagaacttctctggagttttgagctactccctccgttttataatgtaagactttctagcattgcccacattcatatagatgttaatgaatctagatatatatgtgtgcctagattcattaacatttatatgaatgtggacaatgctataaagttttacattatgaaactgagggagtattaatctaaaaaatcatccgatgtgtagtttggcctttactatttattattatgtcggagttcttggtttgtaaatatatcttcctgacctagaagcaacctcagtgcaatgaagctttgatgctcaatatttggaatagttttgtaattccggtacttcaaaagttcaaaatactatcttcttgtgcaatgatgcttttctgggtttctctactatttggcctatctttcttgccagttggggccatatcctcaaaattttaagcaagctgaggctttgcatagtcagaatattttgagacaacagctgagtgaaatacttttgacttttattgttagttgaaaagtttactgctttgaacttcattacgattttctagtccatattttgtgcgtgtggagtgattgtacccagttttttgtatttgtcaattgcatctcactgtcatggctgattctttatgattttctgcagtctgggctggctttccagaacgagggcgagaaggtaataaattcgttgtagctgataaaccaaagggccaatctaggggactctactgtacagactcaattgaagaagtgattgaagaacggaagatgcgaagagaaaatgcctgtgacatatttgaggaaaatggaagtagcgagcatcaggaatcaaatgttttaggcacgatgctgtcagactagagtatcccatctcttctttgcttaccaatccagtctctgcattggttgagggatgaaactaatttgcaataccacatacagcacaatatccagcactggtttctcttttccagggtggcacaaatatatgtagagtaaatttcagagaactccatttttatggtcaaagttgcagtttcgcgactcggtaaggagcataatagcaccctttcaaaccaaattcttgtggcaatgattaagagaataccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0141400, RefSeq:Os05g0141400