Os05g0143200

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Revision as of 10:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0143200| Description = Conserved hypothetical protein| Version = NM_001061149.1 GI:115462028 GeneID:4337774| Length = 4550 bp| Definition ...")
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Gene Name

Os05g0143200

Description

Conserved hypothetical protein

Version

NM_001061149.1 GI:115462028 GeneID:4337774

Length

4550 bp

Definition

Oryza sativa Japonica Group Os05g0143200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2473074..2477623

Sequence Coding Region

2476376..2476453,2476710..2476780,2477146..2477488

Expression

GEO Profiles:Os05g0143200

Genome Context

<gbrowseImage1> name=NC_008398:2473074..2477623 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2473074..2477623 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaggcaacatggaaatgaataacttatgcgttgagcaggaaggttctcaacttccggaagagaacaagaataaggtacaatgcaaatatctttcatgggaagaaacatctgaaagcgatctatgggactgcaggccagacttagtccttggtgcagatataatatatgatccggtctgtgtgccgcaccttattagagtgctttctatgctattgagaagggggaataatcgaggaactaataatgtcgcaaacaaagaagaaaccagcaacgaattcagtagcgctgcgacagaagttcctgtcgcctacatagccacagttattcggaatgccgagacattcaactgttttgacaaagcagctgcggatgccaagttgtctgttgtcaacattaccaacagtgaagctcctttgagtcttcttccttatatgctctcatatgatagatcaagtgtacagctacttaaaattacattattatcctaa</cdnaseq>

Protein Sequence

<aaseq>MKGNMEMNNLCVEQEGSQLPEENKNKVQCKYLSWEETSESDLWD CRPDLVLGADIIYDPVCVPHLIRVLSMLLRRGNNRGTNNVANKEETSNEFSSAATEVP VAYIATVIRNAETFNCFDKAAADAKLSVVNITNSEAPLSLLPYMLSYDRSSVQLLKIT LLS</aaseq>

Gene Sequence

<dnaseqindica>3303..3380#3637..3707#4073..4415#atctgaaatccatggcccccgccgccgccgagcaggagctgctcctccacctgaagctcgccttcctcgcccgggagccccccgcctgcgtcctctccctcgccaggtacgcgcgccccccacgcgctcgaattcgtatgctgctctgcatcgatcgatcgagtccccaatctcaggcaagcctatgcggttggttgccttcagaaaaatgttgccgatacagagatttggtttggatttagtagtggaggaggctgtgtttgcgtcagtagtgtgatgagacttggctagtgattgagctccaatgagcagagagatctttagacccaggaaagttcagagaacttgtcagtttccaccttatatgaatgtgtcaggaaatttcatacaaaggtttttcttaaaaaaaataataatcttcctcttctcagttgtatgaatgtgattgtaacttgacaaggcaaagcgctattttgttttctcttcttttttttgataagtttatggtggtgtttatttaaatttgtgtgtatttgattgtgcagaaaagctgggggaggttctgtcacgccacacgttcaaaattttattttggagagttgtactggcaataatgtaaatgtcttttgttatctcacgcaaaactatcaacagaaaaaaaaacgaccatgatgtgtgcgttgtagaaagatgcataatacaaaagagtcacaatttggtttacttgacatttttataattttctggttgttgcacaatattttcctgtaactcctaatctaaaatgttgagttttcattacaggcagggggagatcaaaactgtagttatgttacaactattcttaaaaggattatagcagaagctgagttatcgtcagatattgtgattgatggactttatgaggaatttggccagttcatgtcgtcaaaatcagtacgtcttttaaacatcgtaatatagccaagtagtagttaataactgttgaaatgctgtactaaaagtaacttattttataacatgtgcagaataattcatccttaaataggactgagaagatctataaagaaatatcttttatttctcctacaagtgagtttttaattttgaattcttccaaattataatagtttgtaacatgcaccttttatgtagatgacaataaacgagtaagcttggttgctcgattatcatgttctatcaatatgctcgaaggtgatacagggtatgatggcattgaatatataatctactattatctatatattaagctacttgcataaattcttaattcatgtcagtgcatacttttcttttacaggtgctctctttggccatcaggtttattcctatctgagtttattctttcatacccaaaaattttctctaggaagtgttgctttgaggtaaataccgattattttttgtgttttagtttagatacatggaaaatgttatctttatctagcatatatatatttataggaatatgttcagctcaactactctatcttctgctgtaaaatattattactgtaaccagggacagatccaaagtgagccaacctgatcatcccccagcaaatactggttatatcttgcttaggcatgcgttttgcaacacaaatatatagaagtccattgtacatttctctaatctactactacttaaaaagtataagatgtttccttcgtccgttaataaataaaagcgataaaaaagttcgattgtaacgaaaaaagtccagcgcggaaaaaaaaaggcgtggcaaaaaaaaaacctgaccgattcttatctgtactaaaaaagcggacaaaaaagaagctcggcacggcaaaattttcgtccgtttcttttttttttcccctttttcggttttattttctttttgccattttttcaccatttttcgcggttttttcgtccattttccttttattttctttgcgttgtttttctcttctttttttttctttcaccatttttccggtttcaacgaaatccaacgcgctatttttggcggtttttttttttcggcctgaatcctagcgccgccgccatggcgatttgcctctccatgcgtttcctcatccaattgattgcaaaaaccgattccccactactctctcatcattttccccttaatttcccattagttcgtcattttttattccgagttttgcggattgcttcgattttgataaaaattcgaaaaatgagatcgagtggatcaaaatttctcaacaattttggagatcgagaaagattcggccgcatttgacggagaggatcgactccgtcatcgtacgggcacggtactatgcgagctcgaccaaattaccggatttggtgggaggatcggctccgtcatggtacgggcacgaaactgttcgacatgggcctacagctccacttgtgggctgagccaaagagaggtaggccaggcaaaggactgttcaagctaggtctacagctccacttgtgggctgagccgaagagagataggtcgagcagatagaggcaacggactgctctaggactagagctgaaaaggaaggaaagaatgaacgttcggtccaaaaaacaagaaagcatttggttcaaaatcaagggagtataatgtatagtataaaaaacgtttttacccgttgcaacgcacgggcattttttctagtgattatacaatgtgtaaaattgagcttgaactctgtcgctagctctctgcaaagcccttctactatatgtgtcgctttaccttgatgtttttcttgagcaaatagatatgcagttactgttgctatgactttagtatgatcatctgtctcatcagcatcatactttttccttgcctgttatatcaacagaaaatctcatgaccgaaacttttaaaagttatatgtgagtgtgtcttacccttctaaatgtttccatgataaacagctaggttctggtgttggtttggttggtgtatgtctgaactatgtcagcgcctccaaggtatgaaagtttataatgccactctccattcaagtaaatggatatctgtgaaaaagtaagccttgtatagtttgtcaagacgacttaactgagaaatgaaaatgcagacatatagtcaactctttaagtttgactgactgtagcgactagtgatggttatgctatgagctatatttactcctaactaagctcataaacttcttcaaaggttagagattagttcaacaggaaagacaggtgacacagtgtttatacgatgatgcaggttattcttactgatggtgatgcatctacactagaaaacatgaaaggcaacatggaaatgaataacttatgcgttgagcaggaaggttctcaacttccggaagagaacaagaataaggtatgctatcttcttatataaagaatatactttcaagattatacattgtgtatatttttcagtatgatttcatttgagaaaaaatagttgtgtgctttccagtaaatgttgtagcttaattagtctctcttgtagtcttgtactcttgttgcactttaaccaccagacaccaccttgaatcagatacctgtccttttgaggttagatcaaatgcactactggataaaatatgattgtactatattctggcatgcaggtacaatgcaaatatctttcatgggaagaaacatctgaaagcgatctatgggactgcaggccagacttagtgtgagtacagtatttccttgggcaataattttttgtattattgtagcagtttacacttagtttttccattaccattatccatctgacactggacatgtgactgtgggagccatgaaacacttgtttgaatcaattatcaatttatcgagctattgcgacttggaaaatagagagtaaaaccttttgagcatagtgtcgttgagttcatgcccattaaactgaactgatctggttgaacaaatacaaatagcctttgcaagctgatgacaggatacacccctgctgacacatgatccagattacatcagtcccttcatatgtttctttttcgtttcgataaacactaatttgatatcttttgacagccttggtgcagatataatatatgatccggtctgtgtgccgcaccttattagagtgctttctatgctattgagaagggggaataatcgaggaactaataatgtcgcaaacaaagaagaaaccagcaacgaattcagtagcgctgcgacagaagttcctgtcgcctacatagccacagttattcggaatgccgagacattcaactgttttgacaaagcagctgcggatgccaagttgtctgttgtcaacattaccaacagtgaagctcctttgagtcttcttccttatatgctctcatatgatagatcaagtgtacagctacttaaaattacattattatcctaagacactgattggaactccagcagatcattttttttatagtagttgactgatcataaattcgtttttgaagtaatcagttgactatgatcataaattcgaaatggtatcaatgacaattatcaacgtcggatgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0143200, RefSeq:Os05g0143200