Os05g0143400

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Revision as of 10:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0143400| Description = GINS complex, Sld5 component family protein| Version = NM_001061151.2 GI:297603810 GeneID:4337776| Length = 3019 bp|...")
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Gene Name

Os05g0143400

Description

GINS complex, Sld5 component family protein

Version

NM_001061151.2 GI:297603810 GeneID:4337776

Length

3019 bp

Definition

Oryza sativa Japonica Group Os05g0143400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2484317..2487335

Sequence Coding Region

2484497..2484769

Expression

GEO Profiles:Os05g0143400

Genome Context

<gbrowseImage1> name=NC_008398:2484317..2487335 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2484317..2487335 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctcctgggaagacgacgactcggccgcggccgccgcggcggcggcggcggcgagcactgacgtggagcttctcaagcgagcgtggcgcaacgagaaggcgtctccggagatccttcgcttcgactctcccctcgtctcccgcgtccgcgagcagatccagctcctcgtcggtttccctctcctccccttcccttcgattcttgattcgtgcccaattcgtcgtgttctagctcaaattgttccggaattcttatcgactgtcatgtga</cdnaseq>

Protein Sequence

<aaseq>MSSWEDDDSAAAAAAAAAASTDVELLKRAWRNEKASPEILRFDS PLVSRVREQIQLLVGFPLLPFPSILDSCPIRRVLAQIVPEFLSTVM</aaseq>

Gene Sequence

<dnaseqindica>181..453#acccccccaccaccacgccgtcgcgctccgcttcctcccctcccgccggcgacctcgccgccgacgccgccgccaccgccgcgtcgacctgaccgaccgacacaaacggcgtagccgccccttgctggccggcgaggccaccatccgggagagtgccagttactggtttagcgaaagcagatgtcctcctgggaagacgacgactcggccgcggccgccgcggcggcggcggcggcgagcactgacgtggagcttctcaagcgagcgtggcgcaacgagaaggcgtctccggagatccttcgcttcgactctcccctcgtctcccgcgtccgcgagcagatccagctcctcgtcggtttccctctcctccccttcccttcgattcttgattcgtgcccaattcgtcgtgttctagctcaaattgttccggaattcttatcgactgtcatgtgatgtgattttggtcaggaggagacgctggatgacttcggcgagagcggcgtcgacgacctggtggtgtcgctctaccagatggatctcgatcgcacgctcttcctcctccgatcctacctccgcctccgcctacaaaaggttaaattcaattttccattctctgtaactccacccgcattggatcgatcactgaactgaactggtggcattggcattgcctgttactttgacggatggatgtagattgagaagtacatgatgcacatctccaagtctgaagatctcttgagccggctgtcgcagcaggagcagcgatttgcgaagaggtatttttcaggcgactagaccgtctactcgttgtgattacgctggttagttgattgactggattcaggtggttttgatgatcatttgttgggtttgatttgttgcaagttgtacggagatgatggagaagcatctcgagcagtcagtgctgtcgaagcttccatacgggtatgactccgtcacgaggcaatcattgtcgagcacggaggatgacatgggtattccttttgatcctataattagtgcgtttatttgggatgcaatactattttggtggttgtagttttgagcgatacataatctgcttaatgcaaatgatgagtacaaaattcaccatttcaaagcagaaaacacgacatttctcatgctatctgatcaatctctgccaaatagatgttggttggagttttggtcactatttggcagagatttgatcagatagcatgatcaaatttggagtatgatcaaattttaagtatcaaatttggtgcacccaaaatttgagttcatatcatactcataaataacattatttaaccacaggatgcaataaagacctctttgtatactcattcatcttgtagtctcggatatgctcaatttaaacagttctagaactgaatcagcttcgcatatatcaatccttttattataatttttagggagtactaatgactgctaatttttactaacaaagtggtatattctttgatacagttaactgacgagaaaatggtgtcttactggtttgccctgaaaatatttaagtcctcctagagttagtactatttatccgcatgcatagatgaatagaaagtaaaatgctgttatagttagttctttgaaacggaaatgcatgacacaacagtatgcaggaatgtcaaccatacacagtttcagggagtacagagtgagaaatgtcaaccgtacacagcgcgataatgttccttgtctaacataatcaccagtttttactgatcatcagttgtgccaaagatccatgcagatatattttaccttgtatagtggttgcaatcttcaatccaccaaagagccgtgttgcatacagttaggaattaatcagtgtgtagtaactaacaatccggtgcataactttttttaatgaaatagtgtgatcaggatggtccaactggttaatatatggtatgtatcttggagctgaaatacattccatgtgctttttactagaacaggaacctgagctgcacttttagttaaaagagtaaagaaagttccagcaaaaggttcttttctattttaagaagatttgggaattatttatagactgtttatttacatgccttttattgctcaaaattccttcctatttctgaagatacgctgatgtgggacatatgtatttttgagtgatgtaatactgtaattgacctctagaaactatatgattcgatttttttttttttgccttgttcagttccagagcctcagcttgacacctttgtcttctgcaaaaccaagagtgacgtaggagcattccagctagatgatatgtaagtgccgaagttctcttgttttttgctgttgcgccttttcaagctctacttaacactgtggtgctctaatttcacgtagaggggaggaggttgtggacttagttgctgatgatttgtatgtcctccggtacaagtccatcaagggccttgttgagagtgggcaaatcgaccttatttgatgcgaatcacaaggtaaatgctagcaagtgaccactgaagatgcaaactctgtgacagacgtatcagaaacaagtcttctttggttttgtcgtgatctctaagtgggtcaactatggaggtgagggtgacccgatgtgctgattcctgtgaaagaggaaattatgtggcatcctattatatgtagtcaacagtaatcagttaggagaatgaaccatcggtacatgttctaaaattgttaattttctagattgtcatcattttagttgtcttgttaacccagggtccttcaagaaccaagattattaacgtcctcggcaagagaaatctagttcactggtgatcgttataaattggacgactcttttgccttagttggcagcacatggctggcaatggcatctgtagccatttttataattagtgagcaatcaggatcatatgcaatcccactcaactttgtccaagtctcttaaaagtggagtgtttgctttgatgaaagagtatcttcaaagtaccatttctac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0143400, RefSeq:Os05g0143400