Os05g0144100

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Revision as of 10:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0144100| Description = The start codon is not identified.| Version = NM_001061157.1 GI:115462044 GeneID:4337782| Length = 2980 bp| Definit...")
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Gene Name

Os05g0144100

Description

The start codon is not identified.

Version

NM_001061157.1 GI:115462044 GeneID:4337782

Length

2980 bp

Definition

Oryza sativa Japonica Group Os05g0144100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2515678..2518657

Sequence Coding Region

2515679..2515726,2516185..2516262,2516399..2516575,2516760..2516837,2517137..2517309
,2517437..2517592,2518016..2518076,2518274..2518492

Expression

GEO Profiles:Os05g0144100

Genome Context

<gbrowseImage1> name=NC_008398:2515678..2518657 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2515678..2518657 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cagtggacggtttcagatattgctctatcacctgatcagcaattacttgcatattccagtttgtcgcctactgttcacatagtgaatgtgcagagttctgcaaaggaatcacaagctaatgttactgaaattcatgatggtttggagttttctaatgatgacgatgatgaatattcttttggaatattttctgtgaagttttcaaaggatggtcaagaaattgttgttggcaatagtgatagatctataaatgtttatgatcttagagcaaataaagtgtctgttcgcatccgtgctcatgcggctgatgtcaatgcagtcaccttcgctgatgaaagtggtaatctattgtactctggaagtgatgataatctctgtaaggtgtgggataggcggtgccttgctagagaaaaaccagcaggtgttttgacaggacatttagatgggattacatttattgatagccgtggtgatggacgttatttcatatccaactgcaaggaccaaacgatcaaactttgggatgtgaggaaaatgtccgcttctattaaaggccgtcaaccgagattttttgactgggattacagatggatgtcattcccgttggaagctcgacactgtaagcatccaaacgatcagtctctggccacatacagaggccattcagttctgcggacacttatccgttgctacttctccccagtgtacagcacgggtcagagatacatatacacaggatccagcgacgagtatgtctacatctatgacgtggtaactggggatatcgtcgagaagctttcgtggcatggatcgatcatcagggactgtacctggcatccttacaacctgacaatcgtcagctcttcctgggacggctacctggcaaggtgggaggcatcaggggacgaggacgacctttctgtgctcacggaaaacgaacagaggacgagtccttaccgtcagtcgtacacacggcaccttctgctgtag</cdnaseq>

Protein Sequence

<aaseq>QWTVSDIALSPDQQLLAYSSLSPTVHIVNVQSSAKESQANVTEI HDGLEFSNDDDDEYSFGIFSVKFSKDGQEIVVGNSDRSINVYDLRANKVSVRIRAHAA DVNAVTFADESGNLLYSGSDDNLCKVWDRRCLAREKPAGVLTGHLDGITFIDSRGDGR YFISNCKDQTIKLWDVRKMSASIKGRQPRFFDWDYRWMSFPLEARHCKHPNDQSLATY RGHSVLRTLIRCYFSPVYSTGQRYIYTGSSDEYVYIYDVVTGDIVEKLSWHGSIIRDC TWHPYNLTIVSSSWDGYLARWEASGDEDDLSVLTENEQRTSPYRQSYTRHLLL</aaseq>

Gene Sequence

<dnaseqindica>2..49#508..585#722..898#1083..1160#1460..1632#1760..1915#2339..2399#2597..2815#gcagtggacggtttcagatattgctctatcacctgatcagcaattacttgtaagtctgtctatgatgcatctaataaacaggactcgatctaagaccttagccctgttgtttggatgaaggaaaatatataggaactgatttgtaattgttacggggaatgataaccatagtggtaacatttatccaatctgaaaaactacttgctatctccatgtagatgctatatagaaaatagaagacatgttgaaaaactattttttctcttttgcatgctgatattggtgaagttcactttttttatgatttgttatttagtttaccattttaaaattcaatgatatatcaattgacaaacaatagccgttgttttatgaataaaattatctccgtggtgaacggtctgttttgcatcgaactgggtgctgacattaatcatttagcactctggatgtttcattttcatgtgtgtgcttgttttccctcaagtctatttgatcctttcacaggcatattccagtttgtcgcctactgttcacatagtgaatgtgcagagttctgcaaaggaatcacaagctaatgttactgtatgttctatactccgaagctttccctatattagtactagcttttgaaagcatgagctgcctagctttgttgaattcataaaatgctagtaatgttcttgtaaccagccatgtttcaattgttcgttttctgcaggaaattcatgatggtttggagttttctaatgatgacgatgatgaatattcttttggaatattttctgtgaagttttcaaaggatggtcaagaaattgttgttggcaatagtgatagatctataaatgtttatgatcttagagcaaataaagtgtctgttcgcatccgtgctcatgcggtataaattagctgatttgccatatgctttttggttcaatcagttgtatgactggtttttgccttgttcattccatttcatgacctagctatctcatttataccaatcttctagttttttattttacgcaattgtataacacatttatttgctatcttattttcttctcaattggttctgtaaggctgatgtcaatgcagtcaccttcgctgatgaaagtggtaatctattgtactctggaagtgatgataatctctgtaaggttagtgttcttgttaattgttggaataatgccttcttaatcttgcttcaatatgaaaacgtactctatcaattggaaagaagaactatcacaaactatgtgtataatgagcataacaagagttgaataggtgatggtgaagggtagggtttacggtttggaaatggaataatacagctcctagcatctagatgctagaatgcatttgtgaaggaacagtagtaaatccaataaatagactcttaaaacatccaatcttgtagtcagtgcttgtcctaacaatattttatgatccttaggtgtgggataggcggtgccttgctagagaaaaaccagcaggtgttttgacaggacatttagatgggattacatttattgatagccgtggtgatggacgttatttcatatccaactgcaaggaccaaacgatcaaactttgggatgtgaggaaaatgtccgcttctattaaagggtatagtttttgctctacggccattcattactttcacttctttttcttgcgaggaattacatttacaatgttgatccccatatttattatatatatttctaagactctctatcgcctgttcttgcagccgtcaaccgagattttttgactgggattacagatggatgtcattcccgttggaagctcgacactgtaagcatccaaacgatcagtctctggccacatacagaggccattcagttctgcggacacttatccgttgctacttctccccagtgtacaggttagagcccaagatggattattttagtcacacgcattcaagtttatttttaaccattttagcaaagctatatttcactctttcagcaccatcatgtacatactgttaaagaaacaatcagtgttgctgctgctttttactccttgatgtccatcaaagttggtagagcatcatactctaactaatcgctataaaagcttaggtttatgtcattagaggtttatgtcagtcttggtttctggagtgggtagatctaagtttaaggtagttgatcccttctaaagaaaaaaaaagtttaaggtagtcgatttgcttgtgaccatttgagtgaaaaactgtaaagacagctattataatgaatttaaactagcatggatcttgttcagttactagtcttattaataacaatttccttcattgcagcacgggtcagagatacatatacacaggatccagcgacgagtatgtctacatctatgacgtggtatgtgattcaacaatttcctctggatactctattgatttatttgtttattcttcatattttgtaaactatagcctgttgagttggtacatttttcagatacttgggtcatttgttatgttacaccaatagtgtgtcaactatcattgggcataaaatccatctcgttccaaaatctaaaactgatgttctttcaggtaactggggatatcgtcgagaagctttcgtggcatggatcgatcatcagggactgtacctggcatccttacaacctgacaatcgtcagctcttcctgggacggctacctggcaaggtgggaggcatcaggggacgaggacgacctttctgtgctcacggaaaacgaacagaggacgagtccttaccgtcagtcgtacacacggcaccttctgctgtagggaagagaagtcattttggtttcctgtaaggagttgtgatgttgctacatctgtaatcgcctgattgcaatgctcattgcaacagtgtataggactgggtgctgccaaactgcattttctgttgtagagaggccattggtcgcctgcaaagagttatatttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0144100, RefSeq:Os05g0144100