Os03g0688200

From RiceWiki
Revision as of 19:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0688200

Description

Conserved hypothetical protein

Version

NM_001057478.1 GI:115454684 GeneID:4333766

Length

5243 bp

Definition

Oryza sativa Japonica Group Os03g0688200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28218723..28223965

Sequence Coding Region

28218786..28219473,28219729..28219901,28223150..28223224,28223298..28223762

Expression

GEO Profiles:Os03g0688200

Genome Context

<gbrowseImage1> name=NC_008396:28218723..28223965 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28218723..28223965 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcctcccccaccggctcctcctcctcggcccccgccgccgcggcggcggcggcggccgaggccaccgacgggccgaccctcagcgtcgtctcgaagcggctccgcgcgctgcggaagaagcacaaccggatcctccagatggaggagtcgctcgccggcgggaggaagctcaacaaggagcaggagggggtgctccgatccaagcccgccgtcgtcgcgctcatcgacgagctcgagcggatgcgcgcccctctcgccgccgccctcgccgaggagctctcctcccgccccgccccctcctcctccgccgcgccgccgccccccgcatcctcctccgccgcaggcgccgcggattcgtccgtcgtcgaggatctcctcgcgctcatctacttcggcaccctcttcgacctcaagccgcagaccgagttcgtcgccaccatggtcgcgcgcgcgcaggagcgggactgctgcatcacctacgactacgtcacggaggacgccgccgacctgctgcaccagtccgatctcgacaaggtgtctgctctggccgccctcgccgcctcgcgccctgccgcggcggtgggcgtctcgcaccgcgacgcgctccagtcctgcgcgcagcacgcccgcctctggcttcgccgtgccgatgagccaatccaccccgaatccagcatcacttatgcagcggttagggcgaagttggacaagatcatggcttcagactactacacagcgcaaccggagatgccggagatgggggctgcggtcgatttgtcggctgctgtgcaggagagcatggttgtgtcaccagaggcgccggctgtggaagagagccaggctgagggacacaaggatgagaaggaggcttcggaggctacagaaatctacaacgataatcagcctaatgtagctgatgctcagaatgtggaggatgaagccccggtgaatccttctgaagagttctcagcagcagaggtggagcaggagaagtttgaagcagatgtggaggaacaagagaggaatgcagatcaacagttcacttctcgacggccttaccagaaccagcgcggtggtggtggtcgtggtggtggcaggaggggttaccagaatggaggtcgtggtggacgtggggggcgaggaatgggcggtggcgggtaccagaatggtcgtggtggtggcggcggcggtggctaccagaatggccgtggtgggggtgagggtggtgggtactactataatgagcctggttactaccagcagagggggtacagcaacagaggcaggggtggtcgctctggtggtggcaactcttattacaacaatcaaggtggaggttcgcagggaggtggccacgcccatcctgggagggttgagctgggcgcaaacgcttag</cdnaseq>

Protein Sequence

<aaseq>MAASPTGSSSSAPAAAAAAAAEATDGPTLSVVSKRLRALRKKHN RILQMEESLAGGRKLNKEQEGVLRSKPAVVALIDELERMRAPLAAALAEELSSRPAPS SSAAPPPPASSSAAGAADSSVVEDLLALIYFGTLFDLKPQTEFVATMVARAQERDCCI TYDYVTEDAADLLHQSDLDKVSALAALAASRPAAAVGVSHRDALQSCAQHARLWLRRA DEPIHPESSITYAAVRAKLDKIMASDYYTAQPEMPEMGAAVDLSAAVQESMVVSPEAP AVEESQAEGHKDEKEASEATEIYNDNQPNVADAQNVEDEAPVNPSEEFSAAEVEQEKF EADVEEQERNADQQFTSRRPYQNQRGGGGRGGGRRGYQNGGRGGRGGRGMGGGGYQNG RGGGGGGGYQNGRGGGEGGGYYYNEPGYYQQRGYSNRGRGGRSGGGNSYYNNQGGGSQ GGGHAHPGRVELGANA</aaseq>

Gene Sequence

<dnaseqindica>64..751#1007..1179#4428..4502#4576..5040#acccgtctcgccgctccatctccaagcccgaatccccaaaaccctagcccaccccctgccgccatggccgcctcccccaccggctcctcctcctcggcccccgccgccgcggcggcggcggcggccgaggccaccgacgggccgaccctcagcgtcgtctcgaagcggctccgcgcgctgcggaagaagcacaaccggatcctccagatggaggagtcgctcgccggcgggaggaagctcaacaaggagcaggagggggtgctccgatccaagcccgccgtcgtcgcgctcatcgacgagctcgagcggatgcgcgcccctctcgccgccgccctcgccgaggagctctcctcccgccccgccccctcctcctccgccgcgccgccgccccccgcatcctcctccgccgcaggcgccgcggattcgtccgtcgtcgaggatctcctcgcgctcatctacttcggcaccctcttcgacctcaagccgcagaccgagttcgtcgccaccatggtcgcgcgcgcgcaggagcgggactgctgcatcacctacgactacgtcacggaggacgccgccgacctgctgcaccagtccgatctcgacaaggtgtctgctctggccgccctcgccgcctcgcgccctgccgcggcggtgggcgtctcgcaccgcgacgcgctccagtcctgcgcgcagcacgcccgcctctggcttcgccgtgccgatgagccaatccaccccgaatccagcatcacttgtaagtataggggttttgtttataatgttgtttgatttgggggatttgcaattatgacactgcaaacattaacttttgctataatgacactggacccacatttcatagacacagatggatccatttgtcatccacgcggagtgtcaaaacagcgaagccaccatgtttgcagtcctaatattgcaattttctcgtttgattttagctgctgattggatgatttatatatatccgtgatgctttatttggttacagatgcagcggttagggcgaagttggacaagatcatggcttcagactactacacagcgcaaccggagatgccggagatgggggctgcggtcgatttgtcggctgctgtgcaggagagcatggttgtgtcaccagaggcgccggctgtggaagagagccaggctgagggacacaaggtgaaaaaaatatttgttcttttcttgccaattaactttacttggcgtggcccaatgattgttgtcctgctaactttatcatgctgtggattgatgatggatttgatgcagtacaatatgttattattgctgctgcttgtactattatatctggtctgattttgttgtctagtgctattattatgatcaactgtggataattacttcatttgggggtagagattgtaaggcagatccgaattgtgtttatcaaaagcttgaagttagataacttgcatatggtttatttgatgacaaatgacagttagtgcctgtgtgtgagaattatgctggaaaaggttcatgtatcccatttaacttgccactctttgtttgtactacaccatgatatttgtattattctgggtctgatgtcacatatatctgaagtaaaaagcatgagtattccactatataggtgccaatgattttgccgctgttggaaattgatatgtttaacaatagtgtatctctaatcgattattttgtagtagacaaatatactactatgtttctcttgcctgctatcattttgaaagcatgatataagatgctgagggttcaaaattacaacttccatgaactttttatgcttaagatttttttatacggtccttaaaagatctattttttctgtacatgttcttctttttcgaccagttaagcctcatggatggatttgatctgcaaaatattctccttttcaatttgtgtaacttaagttttatatgctttgtctgcaataatatactccttatatattgttatgctgaagtattgcttctctgatgccttaatggcttaatgcatatattttcaagttttagacgtactcagtttttattttactgctttttgactctgaatatattatctattgtacagccatgcattcttgacaagcattttttaccaatttgcttggtgcctgcaatttgcatcttaaactttgagttgcctacttaatcttttataggttcatccaaaaacccaccgataaccactaacaagtactgacaatggtgattatatttattctaaaatcattataaggtgatgtaattcaatatggatatgtttataattgttttcatttgctctcagtcatgtgcaactaggtttacagtctactgatctagttcgcatgaatatcctgttctgatggatattatgaacacaccaaattgcatctgtgtctatatgatgtattcagatcaatttaatttactacataggattgctgattgctttctgtatgacccagttttccatgctgaacatgtgcccattattagctagtgctgctttcccatttacatattgttctgtctagagctcttgtttcgtcatatctgaagtcaccatcaacaaataaagactagaacttatcgcagacaacagtcataccatattagatttatcttattgtgatagttctggagttctgctatgaattttaggtagatttcttatgagcacatgttcaatgttcattgctgaaaaatgcttagataatattgaaccactgtgcaaatttattatagcaactaccattatggagttcattttgtccaaagaaaatactattaactcccttccggcagtatacaggcatgccaactcctttaatgggtgtctgtcatacatgttttcattcttcgagttgataacacctaagtgaagcaattagagaaaaggtagtgcatttataaaatggaaaaaaaatgctttgcacctaaaagttgtgtgtatcattgtcattcctatttgtaggaatagaacacaagctgaaagtaaggactatggttcaggcataaccctcctttttttattctaatgaggtaggttggataaccttgttgcatgtcaaatatcagatgtacccttaatatgcttatttccccattcacgcttgtaggatggttgataaattttgtatgattgagccttgaagtgtgattgagttttaaagatattttattttattatttgacattattcatttgagtaaacacctaatcagctcccttctggctatataagtgctactccctccgtttcatattataagactttctagcattgcccacattcatatatatgttaatatctgtaatcatttgtcactctgtagtatgtaatatcgaacaacttatagaattctattttgagctttaaagtgccaatgttgtccatgtttgtgcatgataattttttttgtgaatgaacatggcaaactgaagctctgttctttatggatgattgaacagattatagacaatcgtccatagggatggattaaccaaaagattagcttagaactagttatctaagcaatgttgatgtagaaagtttttcgagagattgtgttttgagaactgtggtactcataatccatattccataatgcatgacataacttgattgtgtctttttaaattaggaacagcaataacaaatggaggtctagagaaggataaagattagattattttgacgactacagactttgtacatgcgatttgtcgatgttgctagttaatatcagttcgtaggaagcaacaaaatgaaggatatattttcatcattgctaagactttgctttattatttcttacattattaatgcttatgcatcgatatccttttagtatgaccaaagtcgtgcctttaatgggcacttaacccaaaactgtctggctagccatatgtgtggatattttttttactgtgcctgtgtaatatagtactgttgaaattgctggcatattgagctcattatatattattatttgtagtatttgctagaagagtctgataaaagtttgtgatgtttgcaacatcttcggcattctaaagccaaatcttttggtttacgtgtgtatagactgagcaatatttagatagaacacactatattgtgaggttagaattgtgtccattatcgattgtgatggattttgtgtgggcataattgctccaaattgtcattatcttattttgcatctagtgcactgtagaggcatttctacaagagagatttttagtttggatgtgatttgacttaggaaacttgaaggtctattatcctgtgggcaaatgttgtgatcaatttgttttgttggcgtagtttgtttgttgcctagtcagttcttttgaggcacgggttatatcttgtttactgatatcttatattttgtttgttgacaggatgagaaggaggcttcggaggctacagaaatctacaacgataatcagcctaatgtagctgatgctcagaatgtggtatttaccaatgatttgttgatatttctatatgcaatatgtttcctcatactgactaaccacataacttcaggaggatgaagccccggtgaatccttctgaagagttctcagcagcagaggtggagcaggagaagtttgaagcagatgtggaggaacaagagaggaatgcagatcaacagttcacttctcgacggccttaccagaaccagcgcggtggtggtggtcgtggtggtggcaggaggggttaccagaatggaggtcgtggtggacgtggggggcgaggaatgggcggtggcgggtaccagaatggtcgtggtggtggcggcggcggtggctaccagaatggccgtggtgggggtgagggtggtgggtactactataatgagcctggttactaccagcagagggggtacagcaacagaggcaggggtggtcgctctggtggtggcaactcttattacaacaatcaaggtggaggttcgcagggaggtggccacgcccatcctgggagggttgagctgggcgcaaacgcttagcttcctaactattttgcttggaggagtgagtgttacgcgaggagaggacataatatgtgggagccattttgttattatagaactaacttagccctttattatgtcaacatttgcccccctcagagttcttttgtcactccaatgactttcatatggatggttggttgataatgcggaatactttggggaagtagtttaaggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0688200, RefSeq:Os03g0688200