Os03g0704100

From RiceWiki
Revision as of 19:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0704100

Description

PAP fibrillin family protein

Version

NM_001057556.1 GI:115454840 GeneID:4333849

Length

2946 bp

Definition

Oryza sativa Japonica Group Os03g0704100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29065415..29068360

Sequence Coding Region

29065452..29065811,29065910..29066023,29066163..29066261,29066832..29066906,29067343..29067410
,29068047..29068119

Expression

GEO Profiles:Os03g0704100

Genome Context

<gbrowseImage1> name=NC_008396:29065415..29068360 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29065415..29068360 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgctcgtgtcgctctcgctccccctcccgtgcgcggtgcccgcctcgtcgctccctccgcgcgcggagccagacgcctcgtcgtccttccacccgcccgcgtcgtcttcgtcgtcgccgcgcggcggccggcttgcgctggccgcggcgcaaccgggctccgggcgccgttgggtagggaggtggagggcgggcgtgtcgtccttctccttcctggcgccgttcttcgcggggaacaaggagaaggagaaccgcgagaaggcggagaggctcaaggaagagctcctcgccaccatcaggccgctcgaccgcggcgtcgacgccacggcggaggacaaggagcgcgtcgagaagattgttcagcaactggaggaggtgaaccaagtgaaggagccactcaagtctgatctcctcaacggcaaatgggagcttctctacaccacctcagaatccatactgcaaccacagaggccaaagtttctgaggccgtttgggacgatttaccaagcaatcaatactgacactttaagagcccaaaatatggagacgtggccctattttaatcaggttactgccaacttggtacctctcaattctagaagagtggcagttcggtttgattacttcaaaatatttaatttgatttcaatcaaagcacctggcagtggtaaaggtgaactagaaattacatatcttgatgaagagctcagggcctcaagaggcgataaggggaatttgttcatactgaaaatggttgacccaacatacagagttccattgtaa</cdnaseq>

Protein Sequence

<aaseq>MAPLVSLSLPLPCAVPASSLPPRAEPDASSSFHPPASSSSSPRG GRLALAAAQPGSGRRWVGRWRAGVSSFSFLAPFFAGNKEKENREKAERLKEELLATIR PLDRGVDATAEDKERVEKIVQQLEEVNQVKEPLKSDLLNGKWELLYTTSESILQPQRP KFLRPFGTIYQAINTDTLRAQNMETWPYFNQVTANLVPLNSRRVAVRFDYFKIFNLIS IKAPGSGKGELEITYLDEELRASRGDKGNLFILKMVDPTYRVPL</aaseq>

Gene Sequence

<dnaseqindica>38..397#496..609#749..847#1418..1492#1929..1996#2633..2705#gctttgcattgctacgcttccgctcccgtgccgtgccatggcgccgctcgtgtcgctctcgctccccctcccgtgcgcggtgcccgcctcgtcgctccctccgcgcgcggagccagacgcctcgtcgtccttccacccgcccgcgtcgtcttcgtcgtcgccgcgcggcggccggcttgcgctggccgcggcgcaaccgggctccgggcgccgttgggtagggaggtggagggcgggcgtgtcgtccttctccttcctggcgccgttcttcgcggggaacaaggagaaggagaaccgcgagaaggcggagaggctcaaggaagagctcctcgccaccatcaggccgctcgaccgcggcgtcgacgccacggcggaggacaaggagcgcgtcgagaaggtgagcgggcggtcgcctcgcctcatccttttctcctcaatttttcgtgaattgggacgtacgagtagtagattagtttgttgctttgcttgcctcagattgttcagcaactggaggaggtgaaccaagtgaaggagccactcaagtctgatctcctcaacggcaaatgggagcttctctacaccacctcagaatccatactgcaaccacaggtcccttctcatctcaaaaagaaaaaaaaaatatgttctgttcaagcatgcaatacattgcggataaaaaccaaaaatgatagttgtgtagtcaggctaacctttcagattgtcaaattctgttcgcttactgatgcagaggccaaagtttctgaggccgtttgggacgatttaccaagcaatcaatactgacactttaagagcccaaaatatggagacgtggccctattttaatcaggtgatttcctcctaaactgattcctatgtgcctgtaacatgaagagatgatcattttgtaatacctttctttgttttgaagaaaagaattctttcataggaatgatatgcattattgcttttttttttgaaaattttatgcattattgctttttatctggaatgttaacttaaattttgagatcagccatatgtgttatggtcttagtcttatggataagcaactcctgttcttttgctcttctagacaaaggaacgtgctagctgaaacactggtgaagtcttacttgattcgagaagtgttcatttccttcttgacttcttcccacctttctgcttctcaacttcttgctcttcttgtacctgcatagacacacatttgtatgtactaacttgggcaaatgtgttccaattatttgcttgatcacttggcataatatatatgtaatgttgtctcgctacaaatttgtttctgaatagcataccccatgctgttggtaaattttcttactattagctagagatattatttctctggagcatggtaatgtacaaatatttacctctgcaggttactgccaacttggtacctctcaattctagaagagtggcagttcggtttgattacttcaaaatatttaatttggtgagacatctatctcttatcaattgtacttcattctatcaatagttcattcttaaaatgttcactctcattctatctcaacggttcattcttaaaatgtttgcactcgttctatctcaatggttcattctgaaaatgttcgctcttttgttataccttgccaaattgccaattaactggcaggtagtgactagtgagcatataggcatgctagcctgctacttctaagtaaccatgtggttttgacacgcagtgatgttatattgttatgatatagccctttcatttccttgctagtgatgtactacgtagtattgttgtttgtccttcagttatgataaagtttccatgcatgttaaagttggtgcgtatataacatagtcaaatttcatgctgcagtcatgagttactaattatatacttctgttatgattagatttcaatcaaagcacctggcagtggtaaaggtgaactagaaattacatatcttgatgaagagctcaggtcagcttctttcaccctatgaatagctttttaagtagtggagtttgatcatgtacctacccactaaaatcggttagttttctcttgtttctacatttaattttagatcgtttcttgtcaaactaatttcccaaaaccagaaatcctttaccctgcaaattaagtatgacaaaaatgccaatagccatacacttgatataggcatcagaatatatgtaatttttgtctaaaaaaagaatatatgtgatttgtagcttttgagtttcaagatagaatggtttgccaaaaacaagaaatatgaccataccaagaaaatgcagccggggttctatcctgtaaaggaagagataggaccctgatgagaagggtggtgctgaccttgtcatcggctaatctaggttctttagcaacatttttctgttatgttttgtggtttttatttttatttcctgttatcgccactacactttagtttccatgtcggcttaaccattttgttttcggttcttttgttctcctcgcagctgtaattttttcccctcatgatgatgtccagttgatagacatggttactagtcgctaatgcagtaatcaatgattaagttcactaatattgcaacaaattgctggtttcagggcctcaagaggcgataaggggaatttgttcatactgaaaatggttgacccaacatacagagttccattgtaataatttctaaatgctgatgtgcactacagctactatggcaattaggtcccagctgtcccaagtattctttttcagtcctgatgtattctaagacatgtaaatatgaatatttgagcatagttcttataggatacaatacatcaaaaactgaatcaactcgatatgtatagagcaatgggatggtcagttcattcatccaaattctataatgaatatctgcataactaggcatagcagaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0704100, RefSeq:Os03g0704100