Os09g0529900

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0529900| Description = HpcH/HpaI aldolase family protein| Version = NM_001070280.1 GI:115480302 GeneID:4347658| Length = 1339 bp| Definiti...")
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Gene Name

Os09g0529900

Description

HpcH/HpaI aldolase family protein

Version

NM_001070280.1 GI:115480302 GeneID:4347658

Length

1339 bp

Definition

Oryza sativa Japonica Group Os09g0529900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21581766..21583104

Sequence Coding Region

21581828..21582874

Expression

GEO Profiles:Os09g0529900

Genome Context

<gbrowseImage1> name=NC_008402:21581766..21583104 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21581766..21583104 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcctccgcctccgcctccgccaccgcctccctctcccacctcctcctcgcgcgcaagccagaccccgcgcctctcccctcccgccgcgcccccgccctgctccccttgccgcggcggcgcgggcagcggcccatctccgccgccgccgccgcctccgacctcctctacgccgcaccctccctcaagtcccggctcgccgccggggagaccctgtacgggctcttcctcctctccttctcccccacgctcgccgagctcgccgccctcgccggctacgactacgtcgtcgtcgacatggagcacggccccggcggcgttcccgaggcgctggcctgcctccgcgccctcgacgccgcccgtaccccagccgtcatccgcctccccgaggccggccccatctgggccaagaaggccctcgacctcggccccgcgggcctcatggtccccgccgtcgagtcccccgccgccgcggccgccgccgtgtcgcactgccgctacccgccccgaggcgttcgcggcgccgcccaccccatcgtccgcgcctccgcgtacggcctcgacgactcctacctctcccgctgcgaggacgagacgctaatcatctgccaggtcgagaccgccgctggcattgcggaggtcgacgccattgccgccgtcgacggcgtcgacgtcgtccagatgggaccgctcgacttgtcagccagcatggggtacctgtgggacccagggaacaggaaggtgcgagccaggctgagggaggccgagaagaaggtgttggatgccaggaagaagaatgtgacagcttcagatggcaatgtcgcatatctaggcggattcgccatgccgaacgacccggcagagcagctcaagctgaggggttaccacatggtgtctggtgcagtggacattgggatgttccggaaggcggcgttggaggatgtcaagcggttcaaggaggcagtgatggaaatcggcgaggaggaaggcgaggaggacgatgaaaagaaggacaaggaagacgacgggtactggagtgagtga</cdnaseq>

Protein Sequence

<aaseq>MAASASASATASLSHLLLARKPDPAPLPSRRAPALLPLPRRRGQ RPISAAAAASDLLYAAPSLKSRLAAGETLYGLFLLSFSPTLAELAALAGYDYVVVDME HGPGGVPEALACLRALDAARTPAVIRLPEAGPIWAKKALDLGPAGLMVPAVESPAAAA AAVSHCRYPPRGVRGAAHPIVRASAYGLDDSYLSRCEDETLIICQVETAAGIAEVDAI AAVDGVDVVQMGPLDLSASMGYLWDPGNRKVRARLREAEKKVLDARKKNVTASDGNVA YLGGFAMPNDPAEQLKLRGYHMVSGAVDIGMFRKAALEDVKRFKEAVMEIGEEEGEED DEKKDKEDDGYWSE</aaseq>

Gene Sequence

<dnaseqindica>63..1109#gggactcactcgccgcagatccccaaacctctccgccgccgcgccggctcgcctcgcgcgccatggccgcctccgcctccgcctccgccaccgcctccctctcccacctcctcctcgcgcgcaagccagaccccgcgcctctcccctcccgccgcgcccccgccctgctccccttgccgcggcggcgcgggcagcggcccatctccgccgccgccgccgcctccgacctcctctacgccgcaccctccctcaagtcccggctcgccgccggggagaccctgtacgggctcttcctcctctccttctcccccacgctcgccgagctcgccgccctcgccggctacgactacgtcgtcgtcgacatggagcacggccccggcggcgttcccgaggcgctggcctgcctccgcgccctcgacgccgcccgtaccccagccgtcatccgcctccccgaggccggccccatctgggccaagaaggccctcgacctcggccccgcgggcctcatggtccccgccgtcgagtcccccgccgccgcggccgccgccgtgtcgcactgccgctacccgccccgaggcgttcgcggcgccgcccaccccatcgtccgcgcctccgcgtacggcctcgacgactcctacctctcccgctgcgaggacgagacgctaatcatctgccaggtcgagaccgccgctggcattgcggaggtcgacgccattgccgccgtcgacggcgtcgacgtcgtccagatgggaccgctcgacttgtcagccagcatggggtacctgtgggacccagggaacaggaaggtgcgagccaggctgagggaggccgagaagaaggtgttggatgccaggaagaagaatgtgacagcttcagatggcaatgtcgcatatctaggcggattcgccatgccgaacgacccggcagagcagctcaagctgaggggttaccacatggtgtctggtgcagtggacattgggatgttccggaaggcggcgttggaggatgtcaagcggttcaaggaggcagtgatggaaatcggcgaggaggaaggcgaggaggacgatgaaaagaaggacaaggaagacgacgggtactggagtgagtgagcactgagcagagttgagctgaagatgatcaaggaactgtggtgatggtgtcttttgtttgtcttctgaattcagattgagaggtctaagtggttccattttccaggggcctctggtgtactcttgtttagttgtcaggtcgattttgagaacatcatgtttgggcatcttaggattcccatttgtaggtggtaacttctgagtaccaataaaagccagatttttatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0529900, RefSeq:Os09g0529900