Os03g0728700

From RiceWiki
Revision as of 19:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0728700

Description

Conserved hypothetical protein

Version

NM_001186697.1 GI:297722524 GeneID:9272535

Length

6629 bp

Definition

Oryza sativa Japonica Group Os03g0728700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30515477..30522105

Sequence Coding Region

30515616..30515690,30516260..30516341,30517586..30517676,30518400..30518544,30518699..30519010

Expression

GEO Profiles:Os03g0728700

Genome Context

<gbrowseImage1> name=NC_008396:30515477..30522105 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30515477..30522105 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaacctccttgctttgagcaccccacgcctccacttcgtcgccgccttgaaccacccctcttccttcccatgtggctcatcgccactgccatccctcatccaatgccgtcgccggctcaccaacaggcctgccaccgtgcgccttagcccagcaccgtcaccttgtcccatgtcgccacctcccctcaacacagtgcgctgtggccgctacacatcaactccgctcgacatcgccgcctgcccaccgctgtcggtgctgtcgatctgtcgtcgtcctcgactccgcatcttcgccataaggaacgcaatgcaaaggatggggatagcgatggtttcttgtggacaaaggggagagatggtagcggcaatagtggcggtttcctgcggacaaagggggagagatggtagcaacaacggttggcagcacgagcttgagtcgcctgacagttgttgggctcatccaagtatttgtctcttctatcgattggcatgtagtgatttagtgccttcctctggattgtgcacacaagaactgttggccaggttccccctccactttagcttaagctctattagtgacgatgagcaacccataaccatggagatcatctatttcttctataagatccctccccaatcaatgatggaccaaaataagccgtgcaatgaaagatccctccccaatgatggaccaaaataa</cdnaseq>

Protein Sequence

<aaseq>MDNLLALSTPRLHFVAALNHPSSFPCGSSPLPSLIQCRRRLTNR PATVRLSPAPSPCPMSPPPLNTVRCGRYTSTPLDIAACPPLSVLSICRRPRLRIFAIR NAMQRMGIAMVSCGQRGEMVAAIVAVSCGQRGRDGSNNGWQHELESPDSCWAHPSICL FYRLACSDLVPSSGLCTQELLARFPLHFSLSSISDDEQPITMEIIYFFYKIPPQSMMD QNKPCNERSLPNDGPK</aaseq>

Gene Sequence

<dnaseqindica>6416..6490#5765..5846#4430..4520#3562..3706#3096..3407#ggttttctgtcgattgttgctctatgtggtaagcaacgttcatggtgtttttataggtcatgatgtaatttatgaatgattagtactttctctgctacatattttgtcaaaatatatgtcattagattggtgtccagcgaaataaggttgtgtgatcagtgtagataaatttgaagtgtcgaatcttttctgaagtgaacagtccatgttgcagccttcagtgatccaaacttctgaatcagtgagtttcagctctcttttacttctgagcatgatgaagggctttaactatatcatcctcttattattcagatatagtaatacgatatgtctaaccctatcttcctctttgtatgaagggcatgcagtacattcgtgtgttcttgaaaaagtgtgtaaaacatatgcattctaaattttctggggaaagctccatagatttgattctggtcagtttgtaaacagcggtagatctctggtttagaactggaactatttcctaatcaccaataatgctgaacaccctgcatcaaagtttttattttataaggctcaactactttttctgttttatgggaagacaactggtgagtaattttgcactgaacatctgcgctctactaacctagttaattttttgtaaaattacttccaccttgctgcaaaagtggaggtgaaggctattagaactgtgtggcctgccactagaaggtattataaggtttcctctcttcatattaattatctgaatgacaatttttacttcatagatcacgacaaatggtatgagattaggagcagaagctgactctgttgttccagcagccccctggttcgtgacaggatgcttaacaattgaatgtattatactaaatcatgtaatttttaatgttttacaacaacctctccaacaccttaaaagatgttggttagaaatcagacgatcttcaaagtcaaccttcctaaagtaacttgggagattagggatgggagagctattagcatcttattctattgaatcaatgttcctatttttgtactgagttatctattaatgtgagttggatgcaccaattagtagtgtttttttataaaaaaaatattgtttttaatttatgtatagtagtagctctggtcatgttttttattcatcatgatcaatgaagatttccatttattgaggttagccttttacgaccccattgtttggcttatttgaggaataagccaaatggcttatttgcaaacgaaaaataatttgtgaataaaattttatgtacgtgttcttaacgatctaaaagcaaaggctaaaaaataaactacggtgaaaaaaaacccaaaatcaactccaaatttaaggttgaaaatttaaattctggctaataagcataagcgaaaagatgaggccgttagatttataccgatttttcatgattaaatatcattggccatgtttggtgttgaaattcaccagttttatagttttgcaggaaaatctataggaagctggaaacaacagtgcaagcttggctttctgtcgattgttgctctacgtggtaagcaacgttcatggtgtaatttatgaatgattagtactttctctgctacatattttgtcaaaatatatgtcattagattggtgtctggtgaatctattaggttgtgtgatcagtgtagataaatttgaagtgtcgactcttttctgaagtgaacagtccatgttgcagccttcagtgatccaaacttctgaatctgtgagtttcagctctcttttacttctgagcatgatgaagggtagtttggatgcttaacaagtgattgtcttgtaccaaatcatgtaatttttatgtctttggttttcaaccacctctccaacatcttaaaaaatgttggttagaaatcagatgatcttcaaaatcaacctttctaaagtaacttgggagtttagaaaaagagtaaagtgcacaggcggtccttaaacttgtagaggtgtgtcatctaagtccctaaactctcaaaatgtagatccaactcccagaacttgtcaaagtgtgccatataggtcccaaatcgcaacaactcctccaaaatcctacgtggcgctgatgtggcgtgccacacgaacgtgacgtggcatttaaaaattttccttttccttttttttcttttcttcttctctttttttttcttttattctcttctcttttctctgtgacctgagcaacccgtgtagcggtggcctatagctgcagtgagagcaagaaaaggagaagaaaggaaaaaaaagagaataaaaaagggaaatgaaaattttttaagtgggtctcatttgtcattcaatattatgccatgtcatgtctgtgtgtcattgccacatcagtgccatgtaagatcctggaggagctgtgacgatttgggacctacatgacacactttgacaagttctaggacctggatttgtattttgaggacctagataacacatccctacaagtttaaggaccggccgtgtattttactcttttaaaaacaattgaatcaatgttcctatctttggaggctagaaaaggagaaaacatgattattgaccctgtaaactatggtctcccactactgttgtatgtggttgattttatttttcaaagaatccttacgctttgattgctcaagtgaaactgatcatgcaatgggttttaaatcaatatactttgagcaacaagtataattagttgtttgattctcaacatgattctatttttctgtctatcaccattgttttatgaaatatcaccgtagcgttagcacgttcatattactagtatagtaagtcaattagtaattagtaggcatatactctctgtttcatattataagttgttttgactaatcaaactttatttaatcaagttagcatagcattttaaatacaaaacaaatatgttatcaaaaaacttggttaagtttggctacggaaaaagtcaaaacgaattaacaaaatatacccagatcattcctaaccgttggatcctctcatctaacgacctacattgtgagttggattagcagatggattagtagtaggattagtgaaaccaatggacaacctccttgctttgagcaccccacgcctccacttcgtcgccgccttgaaccacccctcttccttcccatgtggctcatcgccactgccatccctcatccaatgccgtcgccggctcaccaacaggcctgccaccgtgcgccttagcccagcaccgtcaccttgtcccatgtcgccacctcccctcaacacagtgcgctgtggccgctacacatcaactccgctcgacatcgccgcctgcccaccgctgtcggtgctgtcgatctgtcgtcgtcctcgactccgcatcttcgccataaggaacgcagtgagcatgggttgagggccgagtgtgaccctagggcgagcaaagcgggactaggtagcaggccgcaacgtcgtcaccataagaggaggaagagatgaaatcttataaaatgatccattgtcttccgtttatccccatccatgtatcactacagatgcaaaggatggggatagcgatggtttcttgtggacaaaggggagagatggtagcggcaatagtggcggtttcctgcggacaaagggggagagatggtagcaacaacggttggcagcacgagcttgagtcgcctgacagttgttgtaagtaactgatttaccaaggctttgaaattttttcaggtcttcacatcccttgccaactcctatgcggttgctcctaccgtctgctaaaaaaaatgagttcaatgctcttgctttgcttggtagggacgatttgctgttccgctgcagcaccaaaaaccactaatgcgttcctcctcttccttgttctctttgtatccttgttgttgttgttgctgctgctattatgttactgcctccgcattgctctttttgatttgttgttgatttgcttctgctctgtgctgacctcatgatgtatgtgatgccgtgtactgctgccatggctagagaatagaaggatacaaagagaacaaggaagaggaggaacgcattagaggtttttggtgctcaagaactgctcgatgaaatgtttcttgaggtactactaaagtttgaatacatattgaattatctttttagtacttttacatgcggaaaccttcttccttgtttttgttattatattttaatggaaagtaatttatatttaacaaatatttcaatggctcatccatgtcaatcaactaaatcaataagaacatgcttagtttattcccattagggggttgtataaaaaatacaaaacaaaatagatgtttggtgattgtatttacttgatctggcttttggtgtgctcctaagcaagtctgtcaactttttttgcctgtggacatattgtaggggctcatccaagtatttgtctcttctatcgattggcatgtagtgatttagtgccttcctctggattgtgcacacaagaactgttggccaggttagtcaaggttgtttagtgttgttaagattatcatgaatgcatactcatccttattataaacacccctctccccattatctctctctccgcatgagggatgagctgctatatagttacaattgctttttatcacaatctcacatgtttgtttatggttttttttattacaccatgtttcatttattagcttgatcactatttctccttcttatatactttagttcagtgaaagtattttcagggaatacggcaaagaattatgcatcattgtattaagagaaattaagttcaagaaagaaaataaaaggtgttggcctaattctcgttggttcaggtgtgaccaaatcgactaccaaaaaaactacaaataagctagggcagaaaacctgcatccatcggcatcaggccaaaaagaggagcacacaaaaacttcagtccctccactccaaacttctcttggctcatctctatccgaatcttgatatgaatacttcatttgccacctttttttccatttgtattcaccatctcagttcatgttctatccttttagcctttttcctatcatttgcattctccaacgcatttgtcaatactagaacccttttcattataagaattccaaatttattcaactacatgttgtaaatcctctcaagaactagttgatttcaaagttaaacatagaggatttccacttaatgccctttatatcatgttggatctgtgctagcggggtttgttggagttcttagcgttgtcaaggcactagacatgttatggatcctctgatcccgatttcctcgtgacaagtagtaggaggatttatagaactatacatagtactatatatacacacgtatttctcatgttgaggattaggatggtatatgtacacagtcgtactgtaatgtgcacgtctacatctgattgtgttagtacaatgtacacatctacgtctcgtgctgaggattacatttcatactaagtttgatatcttacactgcaaatgataatgcattttttatatttattagtgtaagtttattttcaggtgtgatatctgttaattcttattttggatgattcacttttgtcatcatgttacctattttctttcaagtgatatctgttaactcaaagtgttgtaattaaccaaaataattggtaaattgcttatctcatcctaatattttaaatgtttgatcgatttcttcaaatattgatgtttatttctgtaggttccccctccactttagcttaagctctattagtgacgatgagcaacccataaccatggagatcatctatttcttctataaggtaccctttgttctatgagcttaaggggcatgtgccccccattgccccttgtgggcttcgctccgttgcatcattgcattgacggtgcggagagggcaagatagaaaatgcgctactattcgcggttggttgcgatgtgctcgtctacaaagaatcgtgcgtaggtatgtcttggtggatatgcttaccgaccttacggagatatgtcttggtgaatatgtggtttgcggtgctttggggttgctggagttgctcttacggagatgtctcggtggatatgtggtttgaggtgctttgggttcctgcagttgctcctccaatcagcacaccagttcttttgtgtcgtgagacacatatccactaccctgcacatcatgatggttatgatcaatatgatatgttcactggctcaaataatctccttatactttataatctcatgattaatatgcatagagcatgacgataatcaataaattctactctctcagtttcaaagtacaagtattaatagtttgtttagaaaaaattgagaataaaatgaaatactttcaatgtcttttcctcagatccctccccaatcaatgatggaccaaaataagccgtgcaatgaaagatccctccccaatgatggaccaaaataagctgggcaatgaatggagtagtaaagcactactaacattttttctactttcctcgttatgtagtacgagcaaatatatttttaaacaaacagtggatgatggtacttggctttggaatagtgtcatggaaattatttat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0728700, RefSeq:Os03g0728700