Os05g0148500

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0148500| Description = Electron transport accessory protein domain containing protein| Version = NM_001061184.1 GI:115462098 GeneID:4337810|...")
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Gene Name

Os05g0148500

Description

Electron transport accessory protein domain containing protein

Version

NM_001061184.1 GI:115462098 GeneID:4337810

Length

9185 bp

Definition

Oryza sativa Japonica Group Os05g0148500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2744436..2753620

Sequence Coding Region

2744436..2745139,2745873..2745999,2746112..2746152,2746245..2746283,2746867..2746936
,2747634..2747761,2749013..2749126,2749548..2749590,2749837..2749944
,2750038..2750115,2750304..2750331,2750416..2750465,2750555..2750608
,2750683..2750724,2751026..2751089,2752753..2752898,2753189..2753620

Expression

GEO Profiles:Os05g0148500

Genome Context

<gbrowseImage1> name=NC_008398:2744436..2753620 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2744436..2753620 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgcttgtcgcggccggcgagccccgcgggcgggtacgctcgccggggcagcggcggcgggtacgggcaccactactacgggggcggtggcggtggatcggcgcagacgtcgccgccgggtggatctccgacggcgtcgcccgtgcaccgccacgcgcggacggggtcgctgggtggcgcgggggcggcgtccaccgtggggcgacgtggccgcgcgcataataccgcggcgagggccgcggcgcagcggctcgcgcgggtcatggcgtccaccgacggcgcgggggtaggaggaggaggcggcggcgtgggtggtggtggggatgggggcagcggcagcgacgacgacgagtacgagctctcggggccacccatcgagctctcctccaccccgcggcgcaccggcacccgctccccttccccatcggctccggtgagccgaccaccgtcgttgacgaaccgatacacgcccgggaagtcagttccgatgataccttcgatcaagcaacagaaccggccagcgacgagcggtccagggtcagagtcgcccgcaataaatcgacgggagcaaaggagatcagttgatcttggaagctctctaagagcgcggcgcacatcttcttctcttcatgatgagattaactcactccaagtggaaaccgagggcatgtacgaaaaatttaaccttgcagaagaaaggagtgaggaaggagatgctaagtccatgcacatggctgctgttattgctgatgctatagagccagaggccaatctgattagcagaaaggatgcagcgctacaacaaagaaaggcttcattgagaagtgcttcaagaaggtctaacagcgctagctgtgatgaaattgcagcccttcggtcagaagcaaaggttgccaattctgtatcatccgtatctcagcgtctaaaaagtacgggatcaatcgtgagatctcttcacggagcaaccaatagaatggtcctgtctcaagaagagatgagattctacaagtacgatgcaaaagtaaaaaaaggaagtaaaagtatacattgtgatattgctgaagaaaaacaagaatactggtcatcatttgcaccactttcacttgaagttgtcctgtcaattgggcaaaaagctagagatggagcattgtcagatcatgctgacatggagaccaaaagcaaaatgtctgacgcaagtcacgtgaatgatatgagtggagatggaaatattgagagcatgcttttagttgagagaggactacgtgaattatcttcactcaagaggacgcagtcatgcttgctttatcagaacatcgacgcgtcagacctctctcaggtggcttctccaaaatgtccatcttctgaaggccagaaccctccagagtcattagaattaagcgaggaagagcaagacgacgtacgcttcaagcagtcatggttaacctacttctggagacgggccaaaagtcatgacatagaagaagatatagctgatgagcggctacagttttggatagaacaaggcaatcatccagtttctacgatcgatatcatagaagctttgcaaattgcaaattgcaaatttgcaatccactccccttgggtgtacgccatgtccaccgatcagccacccgcgccgccggcgagcgcacggcgacggcagtgcgtggcggcggccgcggccgccaccgcggcgtgcctcgcgccgctggccgtgctcctggcggtactcgtcctcgcgccgtcgctgctgccgcggctgctcctccggccgcaccacgtcgtccccgtcgtcgcctccgccgagctccgcctcctcgccttcgacgccgcggcgcccgccgtggcgtacaacctctcggcgacgctccggttcgacaacccgggcgggctctacacgtggcggtgcacggcgctccgggcggcgccgtcgtacgccgggcagcggctcggcgacgccgcggcgctccccgggatcacggcgcgcggcgccggcgccggcgacgcccgtgcggcggcgtgggcggggacgcagcgcgtgccgcccggccgccgcgcgcgcgccgtggcggcggcgctcgcgcgggacagggcggccgggtggtacgtcatcaaggtggacgtcgccaccgtgcagaacggcgccgagagcgacttcgcgtgcgtgctcagcttcccggccgccgcgctggcgcgcaacgggagcggcgccgcggtgttcgacggcggccggtgcgtcgacgccgtgcacggcgagatttag</cdnaseq>

Protein Sequence

<aaseq>MDRLSRPASPAGGYARRGSGGGYGHHYYGGGGGGSAQTSPPGGS PTASPVHRHARTGSLGGAGAASTVGRRGRAHNTAARAAAQRLARVMASTDGAGVGGGG GGVGGGGDGGSGSDDDEYELSGPPIELSSTPRRTGTRSPSPSAPVSRPPSLTNRYTPG KSVPMIPSIKQQNRPATSGPGSESPAINRREQRRSVDLGSSLRARRTSSSLHDEINSL QVETEGMYEKFNLAEERSEEGDAKSMHMAAVIADAIEPEANLISRKDAALQQRKASLR SASRRSNSASCDEIAALRSEAKVANSVSSVSQRLKSTGSIVRSLHGATNRMVLSQEEM RFYKYDAKVKKGSKSIHCDIAEEKQEYWSSFAPLSLEVVLSIGQKARDGALSDHADME TKSKMSDASHVNDMSGDGNIESMLLVERGLRELSSLKRTQSCLLYQNIDASDLSQVAS PKCPSSEGQNPPESLELSEEEQDDVRFKQSWLTYFWRRAKSHDIEEDIADERLQFWIE QGNHPVSTIDIIEALQIANCKFAIHSPWVYAMSTDQPPAPPASARRRQCVAAAAAATA ACLAPLAVLLAVLVLAPSLLPRLLLRPHHVVPVVASAELRLLAFDAAAPAVAYNLSAT LRFDNPGGLYTWRCTALRAAPSYAGQRLGDAAALPGITARGAGAGDARAAAWAGTQRV PPGRRARAVAAALARDRAAGWYVIKVDVATVQNGAESDFACVLSFPAAALARNGSGAA VFDGGRCVDAVHGEI</aaseq>

Gene Sequence

<dnaseqindica>8482..9185#7622..7748#7469..7509#7338..7376#6685..6754#5860..5987#4495..4608#4031..4073#3677..3784#3506..3583#3290..3317#3156..3205#3013..3066#2897..2938#2532..2595#723..868#1..432#atggatcgcttgtcgcggccggcgagccccgcgggcgggtacgctcgccggggcagcggcggcgggtacgggcaccactactacgggggcggtggcggtggatcggcgcagacgtcgccgccgggtggatctccgacggcgtcgcccgtgcaccgccacgcgcggacggggtcgctgggtggcgcgggggcggcgtccaccgtggggcgacgtggccgcgcgcataataccgcggcgagggccgcggcgcagcggctcgcgcgggtcatggcgtccaccgacggcgcgggggtaggaggaggaggcggcggcgtgggtggtggtggggatgggggcagcggcagcgacgacgacgagtacgagctctcggggccacccatcgagctctcctccaccccgcggcgcaccggcacccgctccccttccccatcggtaacctcaatccatccccattttcacttccatcactcggcagcggcattcaatcgtcaatcccgtcttcctaataatctaatactcattcacgatctcctaattaatggaatatgccggctgatttatgattttacatcacgcatttcgcattgtttatgcgggtgatgtgtttgatgtgattatttgttacttgtgttcaccaaccaatagtgggcatggtgctcggcgcgctaagtggtggcgtgtaattctgtgcattttagataggtcgttacctttcggatcaggctccggtgagccgaccaccgtcgttgacgaaccgatacacgcccgggaagtcagttccgatgataccttcgatcaagcaacagaaccggccagcgacgagcggtccagggtcagagtcgcccgcaataaatcgacgggagcaaaggtatgctcacatgtttcaggtcttgcacgtggcagatttcatactgcattgttgaaattgttcccatatacatatagcttctccttgctcaattcagcatggctatgcattcgagaggatgttatttatcatgtcccatgtgatttataagtggcgaagccaggatttggggttggggggtgtggggtagggataagccataaggccgaataaccaatatcgatagcaaaggaggccaaatagtcactgtcaataacaataaatgtgtaaactagttctttacaaaaaaaacttgaattttagctctttaataatataattggaagtttggaactagttcttaatgctaaatcctttcaatgtaaataggcatcttctattttactttgaaaaaaaagggaaatcactaactaattttgtagatattgtttcttgctaatgggctaatgtttttttagacttgctaactgcctgaccttgtaagtacaatcatacaacaacagggaggaggggttcagataggggtgtgttggcaccctccggcacccccaacagctccgccactgattaataataatggcatgcatgctaatactggctagtttagtttgaggctgtagcttatataccacatatcagtgagatgtgttagtttactcggcagagaaattgagctgcagatcaaagcaatgggctttgtgccatcattttgttgttggatggaaattttatgaatttgttctgttgctaattttctgatgtaggcaccatattatcatgagcttcggaatggataacacatccacgagtgttgctttatatgtattgcatttgggatttaccctaagcgctacctatcatctatgtaaatttatgcatttcttcacaaatggtggatccaagtgcaccaatgtgttgctttggagaaaattaaacagaacaagtcgcgaatagaaataagtcaaatagctaatctaaaaacacaaaaagcttgttacaaaattcatgcatgcactaacctaggttgatgtggcatttgaaacagattattgccttagattatctacttgatgatagggataagttaaatactttgagaaataaacttaacagatagcttagaacaattggtctaagcaacgcggtagatgttttttttttgttgagaagccgtatttttagagccgtggagcaataatccatgacagcaatccggcaaataagctactactacctccgtcccaaaatatagcgacttttggagctagaaatgcttatttttccacatttcctgggatcaacttcagttggttccacctaggtagtagggtacacacacgcttgcgcattcagtggtactgcatgtttcccgtgcattgaggacttagtacctcaaatctctttcctaccgtgtgttagggacgtgcacgcgtgtgttgtggtgtgagtgtggtatgtgttcgtgtgtgtcctgagttgtaccctctcaaaaaaaatgcttatattttgggatggtgtaacaaataatgccttttgtcgtatctccttccggaagtctctttgtgttgttaattgacagcaagcacctaattgagtttttgttctcttttgaatattattttttatgatcactaataagtaatataggctaaatcatccttaggagatcagttgatcttggaagctctctaagagcgcggcgcacatcttcttctcttcatgatgaggtgattcctgtcataaacagcattttctaagaatttttttcttcgaaaacacaggaggataagaaaattaatgataggaaatgcagaatatcctatatactacttgagtttgtcctaaaatatgagtttgctctcatctatgtttagtccttgattcttgttccagcgaaatgtggtatgactgtttgtatggacttttggatccatctgccaaaagtccaaaacagctatctttctccactttaagattaacctttcttatatgcaacactagtgtgattctttgatgcctcctttgcagattaactcactccaagtggaaaccgagggcatgtacgaaaaagtgagatgaaatcacgattttggatttaatttctgctttaatttgttagaaacactcaaacatgcatcttccagtttaaccttgcagaagaaaggagtgaggaaggagatgctaagtccatgcacatggtatgtccatacacagatacccctcagctatgcatcttcaatgcattgtttgatgtattgtgtcaacatctctgatgtccacatttcaggctgctgttattgctgatgctatagagccagaggccaatctgattagcaggtgtataatttaacaaaacacgcatcttcttgttatacatgcattgcttcttatcttaaactatgttcccatcttgactcccagaaaggatgcagcgctacaacaaagaaaggtaggtttctgcaccaaaatccatatgttcaaatttgatggaacaatttaaattgaaagattttttttattagagcttcatttttatgaatatttctgcacaataatgttgagtttatgactttatgtgcttttgggtgaacaaatttctgtttactaactctttccgaagatctgttgtgctcttaggcttcattgagaagtgcttcaagaaggtctaacagcgctagctgtgatgaaattgcagcccttcggtcagaagcaaaggtagagctttcaccaaatatggttacttattgctgaacgattttcccagagttgtattttgcaaacctaacttttatttatgctgtcgggtaggttgccaattctgtatcatccgtatctcagcgtctaaaaagtacgggatcaatcgtgagatctcttcacggagcaaccaatagaatggtcctgtctcaagaagagatggtgaatatgtttgcctcactatttatactttgacatttcgtagcaaatggatatatcattaaatctgtttatgaaaatcctttttaggaggaggtggtgctaaagagatgttggcttgctcgctactggaaactgtgtgttagacttggtattgagatacttcacactattaatacttatttacagagtggtggtattccttctgttgtaaattctaactaggtctcaaatgtatgtactatgtagagattctacaagtacgatgcaaaagtaaaaaaaggaagtaaaagtaaattcgtaaaattttaaacagatgtaaactttaagactgaaagaatcaagatatgcattattgcccttgcctgttctgtcctttaaatacacatgcaaaagattggataatgctttgcatattttacctttaaaatattgtgattgctgccttgctacttctatatgctttttcaaataactaaattgagtaagtatatttgtgtagcagtgtgttcattacttggatactatgattttctatgaagcttcatatctttttctgttttattattttttttgctacagattaatgtcagggtgttgaggaattagtgtctttcagactgttttccttttcaggcagtcaattgtttcaaaaataaatttgttgtttacatgttttctatggctagctaaattgagtttttttttatcaggtatacattgtgatattgctgaagaaaaacaagaatactggtcatcatttgcaccactttcacttgaagttgtcctgtcaattgggcaaaaagctagagatggagcattgtcaggtcaggttccttatcaaaaactcttttgtgaagatgttgattcaagtatctcatgttcagttactctacaagtgctttgattataaccattggctatcttatggacatggaatcgagacccaaattatcaccgatcaggatacctcatagcttagatcgagaaaaaaacttatgtttgattttctcagataaaatgccaagacttagtgccaaaggccttaatagaatgaagcaattctttaacttcagtaggtccaccttaattggtagatgaattcaatgatcaatgcttgcatggcggatgggtgggatccgatgttatttgaagcagctattgataccgcctccgtgggagccaacggtcgtggttgtgaggccttttctggtgggatctgaatctcatctctggttatggctggtcggagttgtttgtttgtttctaggcattgtgttggtcggttaaaggtcatgtttggcattgtctagttgttgttttgcttgtgtgaggcgtcttttagttgtttctttggttgtgcttggttgatgttctggtcatgtaaggtcgcatgaggccgcaggggcagatctactgcctggtgaccccaggcagctgcccgggctcgtcggtggttaatccactaaaattccatgtaattaagaaaaaaatgaaatagaatttctgtagtaaatactagctatagtgaagtttgctcgtgctctaaaataattctagatacgctactgtgaggccgttgttttggttgtgcatggtcatgtaaggtcactgtacctggctattttagcttttcttctctcgtaatgaaatgacgtgcagatctctgccatgttccaggaaaaaaaaacttaagtaggtcaaatagctagtaagagtttaaattaatctacagaatgtacttgagttgttcaaagttcgctgtccattttctgatatttaatttgtggttaatattggatgattgccacttttaattctgcaccatgcaactactgaatgattccaaggacttttgtcccctgaacatgcagagtaacttgctccatcttttgctttaggcactaaagttctcatcaagagggttgatcttttatttatctccttcatttttcatgaccatgttaccagatgaagcatcattcttttgaagtgtacatagctcatataaattcatcatttcaatcactacatatctgtacatatctgctctacagaattgtttgtatataacgcagatcatgctgacatggagaccaaaagcaaaatgtctgacgcaagtcacgtgaatgatatgagtggagatggaaatattgagagcatgcttttagttgagagaggactacgtgaattatcttcactcaaggtttttcttgctacttattattttgatattcatctagtttatacctttctttcaaagtccatgtgataccacatgacaagtttggtgagatacatggtccagaaataaaaccgtgtacttgaatattttgttcatctttcattttctttctgttcataaatttgcaatgaatttttcctagaatgtgaaagttatcttctgtcaattctctcattttttttaaagtcagttttagtgttgatgaagttagttcaaaatattttgatttggtttcagtctcatcagttgatacaaagactgctaattcactattcatgcatcacttttttgtgtaattagtgaaatgcaaagtgatgtatgaaacttaagagtgctactagactattactactactccctccgtttcataatgtaagactttctagtattgcccatgttcatataaatgttagtgaatctagacacacatatatgtctagattcattaatatctatatgaatgtgggcaatgttagaaagtcttacattatgaaacagaggaagtattagattgactagctttatcattgtgttgtatatattagatgcaatatatgtgtcaacgaattttcatttacatattcccacggaatggtagagaactattatttttatttgggtttcggtctcaataatttaatatcccctttgaaggtagaggacgcagtcatgcttgctttatcagaacatcgacgcgtcagacctctctcaggtggcttctccaaaatgtactcatttcttattcttttcttataatatttttgttttatgagattcccaggtctcttatctcgaaatatttctctctatcaagataaactcataaaatatttttttttcttaatattcagtacatggggaatgtatgcgagcctcactgtgagggtaccgacaatttgatgtttaacacatagcatagcttgggattttgagagctggttataccaattccctcgttcctgatgagaagtgatacactgactgattgtgataccatgaacaaaaccgtatttacaagatagctcatttattcagatgttgcatatgaaataacttcacaacaaaatattagataatatttaatgtgctgaagaattgcagtttattgtgattagaactgctttctagaatcatccctgcacaattcactgagacttcaaaaaaattactatgtcgctatgttgacctgattctattagatgaatacaacttccagtctgaatattgcaactttattacgcacatcaatggcctgcagcaatgcgtgacgtgtagttttactactatgacttaagtttccaattactgcaggtccatcttctgaaggccagaaccctccagagtcattaggttagttctactttactaatattcctttttacatccatagctcgggaataacaatttcactttctaattacatatgctgtcattggtcctagaattaagcgaggaagagcaagacgacgtacgcttcaagcaggtgaaaaaccactctggcattttgttttctcctggaatcgatgtgatgttgcacaaaaattcgttttcggtcagaactggtatgtacaagaactcatgaatacatatggcagtcatggttaacctacttctggagacgggccaaaagtcatgacatagaagaagatatagctgatgagcggctacagttttggatagaacaaggcaatcatccagtttctacgatcgatatcatagaaggtaatctcctctctgaacaatgatgaaactcttgtctcaaagtctgccatcctttgcactattcgttcaaagtttgaaatcatatacttctcgttttgactgtcttgtacaaaatttaccggctaaattgcttactttatctgatgcttttcttgtttgcaaaattatgtaaacaagttgagagaggacttactgagctgaggaagctgggaatcgagtctcagctgtgggaatcgacgaggagatctctcgacgatgactttagcaatcacgggagcccaaccggatcagaaatttagcagaaacataataatggaacgaggcctagtgccaattttgtttttgttcgctggtcctagagtctcattgtttttgcgcacttgtcatatatattcattcatgtaaaagttttgatcggaaccaaaactaaattctctctcctggaatctctcctttttaattttctggtatgttaatttattattctgttaaagcaaaagtgctggattaatcatggaatcatcagtatgctgcgttgtcaaattacatggtctgctgcaacaagatgtgtgcagtgcactggttggttcctctccttttgcttttgcaatggtgcttctattctttcaaggagaagaaaaaaaaaaagttcgactctttcaaggagaagaggagagcacagcaaagcaaagccccactattctgcattgcttgctcattagcacatttgcagctttgcaaattgcaaattgcaaatttgcaatccactccccttgggtgtacgccatgtccaccgatcagccacccgcgccgccggcgagcgcacggcgacggcagtgcgtggcggcggccgcggccgccaccgcggcgtgcctcgcgccgctggccgtgctcctggcggtactcgtcctcgcgccgtcgctgctgccgcggctgctcctccggccgcaccacgtcgtccccgtcgtcgcctccgccgagctccgcctcctcgccttcgacgccgcggcgcccgccgtggcgtacaacctctcggcgacgctccggttcgacaacccgggcgggctctacacgtggcggtgcacggcgctccgggcggcgccgtcgtacgccgggcagcggctcggcgacgccgcggcgctccccgggatcacggcgcgcggcgccggcgccggcgacgcccgtgcggcggcgtgggcggggacgcagcgcgtgccgcccggccgccgcgcgcgcgccgtggcggcggcgctcgcgcgggacagggcggccgggtggtacgtcatcaaggtggacgtcgccaccgtgcagaacggcgccgagagcgacttcgcgtgcgtgctcagcttcccggccgccgcgctggcgcgcaacgggagcggcgccgcggtgttcgacggcggccggtgcgtcgacgccgtgcacggcgagatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0148500, RefSeq:Os05g0148500