Os05g0148700

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0148700| Description = Armadillo-like helical domain containing protein| Version = NM_001061186.2 GI:297603831 GeneID:4337812| Length = 507...")
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Gene Name

Os05g0148700

Description

Armadillo-like helical domain containing protein

Version

NM_001061186.2 GI:297603831 GeneID:4337812

Length

5070 bp

Definition

Oryza sativa Japonica Group Os05g0148700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2764163..2769232

Sequence Coding Region

2765153..2765469,2765732..2765902,2765998..2766071,2766157..2766233,2766341..2766412
,2766602..2766670,2767216..2767262,2767392..2767515,2767591..2767659
,2767740..2767843,2768269..2768344,2768718..2768891

Expression

GEO Profiles:Os05g0148700

Genome Context

<gbrowseImage1> name=NC_008398:2764163..2769232 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2764163..2769232 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctactcgcattcctggtactgtagcagctagcggggtgtactacaatgatcaatacagaatgccatgtaagctgaaaggaattcattgcatggcattgaattgtataccgcaaaaagcgaaggtaaggaagtgcatgaatggatatcaatcaacattcaggttttgtgtaaatgagaaaaatggacaaaccaccgggcagtcaaatggttccttgatccaacaaggccagaatttccggtgtcattcttatggttctcataacagcagtgaaactaaagagtgcagccttgaagatggcactgattcatacagggattttgaagaacattcaagaggagcctcccaattttcagataatcaagttgcagcaaagaaaaaatcagtcaaatctagtcaagggttggctgaagcttgcaaatttgtttacaacgatgcaaaatttgtgaatgaaagagctcaaaatgatattctcttgctttcacgtggcataacaaggctgaacaaacgtgcgtgccaggatgttgctgttttagggtcaggatttctcaagcttgatgctcgtgcaaggaaggacactaaaaaaattgaccacagtgtgaaggaaagggcagcgcggcttacccattttgcgagaatattaaaggaacaggctcagtcagacttgaagaaagcagcagatcagcattggagcgatggtgctttggaggcagatctgcgacgagctgactcggttgttagacgacgtgccatggaagatgctttcatggctttaaagtttgttcgggatatccatgacatgatggcaaacagattacaagagcaattcgcaaaggatggttcctcttctcctgctaattcaagaagtttcatcacccttgagaaaaatggaaataccttcgagctgtttcctcatgaagtttcaacggaccagattaccgccatagagcaagcatactggagtatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggagcttgagttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtgtttccttacttgctgaatgttcaagctctccagatgttaataccaggaaagctttagctaatgcactggctgcagctccatccatgtggattcttggaaatgctgggatgggtgcattacagagattggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaatgaactcacaaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaaaatatggtttctaaagagacagccgatgacagtgcagcagcagatgacaccaggtga</cdnaseq>

Protein Sequence

<aaseq>MATRIPGTVAASGVYYNDQYRMPCKLKGIHCMALNCIPQKAKVR KCMNGYQSTFRFCVNEKNGQTTGQSNGSLIQQGQNFRCHSYGSHNSSETKECSLEDGT DSYRDFEEHSRGASQFSDNQVAAKKKSVKSSQGLAEACKFVYNDAKFVNERAQNDILL LSRGITRLNKRACQDVAVLGSGFLKLDARARKDTKKIDHSVKERAARLTHFARILKEQ AQSDLKKAADQHWSDGALEADLRRADSVVRRRAMEDAFMALKFVRDIHDMMANRLQEQ FAKDGSSSPANSRSFITLEKNGNTFELFPHEVSTDQITAIEQAYWSMASALSEADGID YTDPEELELLVATLIDLDAMDGKKSVSLLAECSSSPDVNTRKALANALAAAPSMWILG NAGMGALQRLAQDSNYAVARAATRAINELTKQWELEEGDSLRFVLNQNMVSKETADDS AAADDTR</aaseq>

Gene Sequence

<dnaseqindica>991..1307#1570..1740#1836..1909#1995..2071#2179..2250#2440..2508#3054..3100#3230..3353#3429..3497#3578..3681#4107..4182#4556..4729#aacctctacatctctctcctccaatcccctcctctctctctatctctcttcccggcctgtgcagagacggaggcaggataggccggcgagcaaaggttcgagttctttcccctcggattccacaaagtaggtgtcttttttgtttaagaaaaatagaatcaccaagttgttgttctcgttgagttttggttgtattttgtcactcgagagcctctgcatgttccaaaagatggtgttttattggtggtgttttgatcatgctagatgtggaggatggacggatcagatattctgttgtttactcgctttgaaatttatgcttgttttagtattatgcatctttgggcaattatcgcatggatggatcatacatgccatttctttcggttcgaatgtcttcctgtttactactttggaattatcgtttttagagtttcgaattagctgattactgcaagtacagttccccgctgtgtttttgtttgtgattctgaactgcaaactgatctaggatcgagaaatgttggtgtatttagagatttaaggggggcgactgatgtgtcaccatttagaaaatcaattatgcatttcctaattgtcatggctgcatgctgtcaagttaaatttgagataactgctgaagattacagaaggcctagaattctattaccccattcatagagtagctgtgattctgacaatacaatgcacagcaggtatttagaaaggaaactgttactacatggttgttaacagcaagcagctattattgatctgataaggaatgaagttctacagtatttttgacgcgacgtattagcatcagttttgctcaagattcacttactgttgcgtgcaactaatgtccaaatttcacatcaggtactaaagatcatatctcttcaaactggttaggaagcttacttaatgaagacacaattggattgattttagtggccaaacccaagccaacatacagactgtgcgcatatggctactcgcattcctggtactgtagcagctagcggggtgtactacaatgatcaatacagaatgccatgtaagctgaaaggaattcattgcatggcattgaattgtataccgcaaaaagcgaaggtaaggaagtgcatgaatggatatcaatcaacattcaggttttgtgtaaatgagaaaaatggacaaaccaccgggcagtcaaatggttccttgatccaacaaggccagaatttccggtgtcattcttatggttctcataacagcagtgaaactaaagagtgcagccttgaagatggcactgattcatacaggtaatatttgtactacattacaggataatgagcctactttttccccagatgaccaatgtttattgaatttgtgtatctggacatgcaaattcattatcatcctaattcctatctttctactgtctttaaatgacacgtcctatgtacaaagctgaacacagtcatttttaagatggacataacccatccaacattttttattttgtttttatggttgacataacctgtttgtctttttaaatttctaaatctattgttgcagggattttgaagaacattcaagaggagcctcccaattttcagataatcaagttgcagcaaagaaaaaatcagtcaaatctagtcaagggttggctgaagcttgcaaatttgtttacaacgatgcaaaatttgtgaatgaaagagctcaaaatgatattctcttgctttcacggtattcctttcataataatctttaaaaaatatatcccttggtaaaaacaagagatttgtacataacaaaattatgtgtctcatttctaatcctagtggcataacaaggctgaacaaacgtgcgtgccaggatgttgctgttttagggtcaggatttctcaagcttgatggtacatgatttcccttttagctgacaagctcttagtttctttggtatgatttaactatccatctaaagctattatttactgaaagctcgtgcaaggaaggacactaaaaaaattgaccacagtgtgaaggaaagggcagcgcggcttacccattttgcgagagtatgatttttcaatatgtttagataattgaaccatccatgtgctttactttttgttcctttctacctctatgtactttagcctgttacctctgtatgcatattcagatattaaaggaacaggctcagtcagacttgaagaaagcagcagatcagcattggagcgatggtgctttggaggtctgtgctagttctctgtccttcacttcattttgctggaactagttgaaaatactgagcgatatatagctgccaaatgtttctggagtaccgatgttgttttattaccggtgttaaccttctttgtgtgtgttactatcaaattcatgggattatgcttatataatacactatttatttgcaatgcaggcagatctgcgacgagctgactcggttgttagacgacgtgccatggaagatgctttcatggctttaaaggtagcccaacttgttcttttccatctctactgtctttaaatgcagcaagttggtttagttttcattacaatttacaagctaagatatgcaagattttaggatgaaaacataatcagttattttgatttatgaaagcaagatttataactcaaactcgtaacaattcttgattatttatttgcttaacatcatgccccatacatcatatttccaacaaattttgtttgttttatgagcctgctgtcatgaccggtttgctgttatgcattacattaatagctaaggtttagtttgattggcttagcagaaaataaataatcatatatctagacatgaataactagcctcagacttaatcatactctatctacaccttgccatatcgacatttttttggtatttgttgctgcacaaaaggaaaagtttatggatcacatactagatgttttgatcaatttgacccttcccaattcttggtatttctcatacagcatcttgattattaaatattacacttgtatgtaattctgtaatatttagtgcagtttgttcgggatatccatgacatgatggcaaacagattacaagagcagtaagttcatttcaaatgctcatttcttagagaaattcaatgtttaattaaggagggtatgattttacttcgctggttcatattcattgttagaacaatctgatttgtactaaaataaatatactttagattcgcaaaggatggttcctcttctcctgctaattcaagaagtttcatcacccttgagaaaaatggaaataccttcgagctgtttcctcatgaagtttcaacggaccagattaccgccatagaggttatatctagattaacttatttagcagaaaactcccatcatatggctaattttggttaaatttgttatccatagcaagcatactggagtatggcatctgcgttgtctgaggctgatggtatcgactacacagatcctgaggaggtgaaacattttttacccacattataaagatgaaccttcctatgtccatctttctaaccttctcttttctgtttctgaagcttgagttgttagtagcaactctcattgacctggacgccatggatgggaaaaagagtgtttccttacttgctgaatgttcaagctctccagatgttaataccaggtatatcacagcattattgagtacagttacctgcaatgtatgttgcttctgcgttgttagcaagatcgaatccatcttcaagtacagaaaatgagaatatacagaaaatgagagaatgttaatataaagaatgcagatttgatatgtcctgtctctatacatcatggctatgtgccaaaatagctaattagcgacaaaaaataatttatggataaaactattatgtatatgtccttagtgacttaaaagccaattcaaaaaaggaactatgttgaaaataccgtagaattaactcaaaaattaagtcttaaataaattttggcggtggctgattcgttgtagggcaaacgatgaggctctatgttatatttctgaattacatcgcattcgtattgaccattattatgtatgtataccccttgtaggaaagctttagctaatgcactggctgcagctccatccatgtggattcttggaaatgctgggatgggtgcattacaggtgaacataaatctctcctatagctcctcctattgacaatttctgattaccttcatatcagaattttttgtatgagaaatttctaagcctctcagagccaggaatcatgcttgccccacagttcaaatttgatcttcatattcatttgtaaccatgatttccaagctgtacaaactgaagctcatttctcccttgtgatcaattatctaaaaaaggttaaaatccatagtacaacgcagcctgtttctgcataataatcagttattgttgaatgaacttgctagttgctacttgctacatgaactagtttctttgaagttacttgggtaactattgatgtttcatcaatctttgcttgctctttcaattgcagagattggctcaagattccaattatgctgtagccagggctgcaacaagagccatcaatgaactcacaaagcaatgggagcttgaagaaggtgacagcctgaggtttgtactgaatcaaaatatggtttctaaagagacagccgatgacagtgcagcagcagatgacaccaggtgatcatgtgcaaataagaaggaaaaaattacactaggattaacagaaacttatacaaacatcacgtttcagagcatatatatggataaggtgaatgtctatctctgtcacagtttcagagcataatgtgctgcttggtatcaaaccagatcaccagaatcatcagaatgacagaatgcatgtaactgacacatcttttcagtgccaaactgccaaagaaattaggaactggtgtaaagataaatgtattccttcagtaagacatagtcaatagtgttagaataattgggctaggcccaacttatcctattaaatctcaaaggcccataataagtgttaaggat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0148700, RefSeq:Os05g0148700