Os03g0739700

From RiceWiki
Revision as of 19:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0739700

Description

Uncharacterized protein UPF0114 family protein

Version

NM_001057751.1 GI:115455230 GeneID:4334054

Length

1758 bp

Definition

Oryza sativa Japonica Group Os03g0739700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31112349..31114106

Sequence Coding Region

31112406..31112879,31113005..31113082,31113202..31113301,31113417..31113547,31113650..31113901

Expression

GEO Profiles:Os03g0739700

Genome Context

<gbrowseImage1> name=NC_008396:31112349..31114106 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31112349..31114106 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcagcagcagctggtggtggtggtggtggtggtggtagcggcaggttgctgagaggagcaaccgcgaaggcttttcatggagacggcagcagccatcatcgtatgatgccatcgtcgtcgtcttcggtggcggcaggcggcggcggcggcgtggctgggccgtgccgcatcccgtccctgaagttcccgtcgctgtgggagtcgaagaggcagggcggcggtgtcggcagccgcgcggcggagcggaaggcggcgttgatcgcgctgggagccgccggcgtgacggcgctggagagggagcgcggcggcggggtggtgttgttgccggaggaggcgaggaggggcgccgacctgctgctgccgctggcgtacgaggtcgcgaggaggctggtgctgaggcagctcgggggcgcgacgcggccgacgcagcagtgctggtccaagatcgccgaggccaccatccaccagggtgttgtcagatgccagtcgttcacgctcatcggtgtggccggatcactcgtcggatcagtgccatgctttctcgagggatgtggtgcagttgtgagatcattcttcgtacagtttcgtgccctgacacagacaattgatcaagcagagatcataaagctgctgatcgaggcaatagacatgttcctgatcggcacagctcttctcacgtttggcatgggaatgtacatcatgttctacggctcccggagcattcagaacccaggaatgcaaggcgataattctcacctgggatccttcaacctaaagaagctgaaagaaggggccaggatccagtcgatcacgcaggcgaagacgaggatcgggcacgccatactcctgctgctccaggcgggcgtcctcgagaagttcaagagcgtgccgctggtcaccgggattgacatggcttgcttcgccggcgccgtgctcgcctcctccgccggcgtcttcctcctgtcgaagctgtcgacgacggctgcacaggcacagcgacaaccacgcaagcgtacagctttcgcatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAGGGGGGGGSGRLLRGATAKAFHGDGSSHHRMMPSSSSS VAAGGGGGVAGPCRIPSLKFPSLWESKRQGGGVGSRAAERKAALIALGAAGVTALERE RGGGVVLLPEEARRGADLLLPLAYEVARRLVLRQLGGATRPTQQCWSKIAEATIHQGV VRCQSFTLIGVAGSLVGSVPCFLEGCGAVVRSFFVQFRALTQTIDQAEIIKLLIEAID MFLIGTALLTFGMGMYIMFYGSRSIQNPGMQGDNSHLGSFNLKKLKEGARIQSITQAK TRIGHAILLLLQAGVLEKFKSVPLVTGIDMACFAGAVLASSAGVFLLSKLSTTAAQAQ RQPRKRTAFA</aaseq>

Gene Sequence

<dnaseqindica>58..531#657..734#854..953#1069..1199#1302..1553#cttcctgctgttcagagcaacggtagctgacagtgacggagttcagcagcttcagcaatggcagcagcagcagctggtggtggtggtggtggtggtggtagcggcaggttgctgagaggagcaaccgcgaaggcttttcatggagacggcagcagccatcatcgtatgatgccatcgtcgtcgtcttcggtggcggcaggcggcggcggcggcgtggctgggccgtgccgcatcccgtccctgaagttcccgtcgctgtgggagtcgaagaggcagggcggcggtgtcggcagccgcgcggcggagcggaaggcggcgttgatcgcgctgggagccgccggcgtgacggcgctggagagggagcgcggcggcggggtggtgttgttgccggaggaggcgaggaggggcgccgacctgctgctgccgctggcgtacgaggtcgcgaggaggctggtgctgaggcagctcgggggcgcgacgcggccgacgcagcagtgctggtccaagatcgccgaggccaccatccaccaggtaattaactgaaactaatcacctcaaaatgcagcaaattttgcgagttctttggaatccgaattagccgaagttttgcggatttaaattactgatggagttcatatgaactgtaaaattttcagggtgttgtcagatgccagtcgttcacgctcatcggtgtggccggatcactcgtcggatcagtgccatgctttctcgaggtaaagcttctacgatcatttcctgctgcaagtgaaaccatgatggactaatcaagattcgagatcgtattaagtgaaagaacattcgaggctgaaagatttcgtgctgaattatgcagggatgtggtgcagttgtgagatcattcttcgtacagtttcgtgccctgacacagacaattgatcaagcagagatcataaagctgctgatcgaggcaataggtacgccccttataatcacttttaaactgcatacaagtaaccatttccatgttaaaccgatttaatttatgcctactaaatcttgacaaatcaaactatgcttcttcttctgcagacatgttcctgatcggcacagctcttctcacgtttggcatgggaatgtacatcatgttctacggctcccggagcattcagaacccaggaatgcaaggcgataattctcacctgggatccttcaacctaaaggtaactgaaatctgtcgatttttgttttgacagatgttcaccagtaaccatgtctggctattgatcaatgctgataaagaaccgtaaatttccatatcgcagaagctgaaagaaggggccaggatccagtcgatcacgcaggcgaagacgaggatcgggcacgccatactcctgctgctccaggcgggcgtcctcgagaagttcaagagcgtgccgctggtcaccgggattgacatggcttgcttcgccggcgccgtgctcgcctcctccgccggcgtcttcctcctgtcgaagctgtcgacgacggctgcacaggcacagcgacaaccacgcaagcgtacagctttcgcatgaacacgtacaggaattgccttatagctccgattcataattcatttattctttcatatcaagattaggaatagcaaaaaaaaatgagttgcaaagtgtgtgtttttatagtattctctctttcttcacttgtaaagagggtacgaagtagtttgtacagagtgtcaataaagcctctcgggggaagaaagaaatctccaattcggat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0739700, RefSeq:Os03g0739700