Os03g0770800

From RiceWiki
Revision as of 19:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0770800

Description

CSLC9

Version

NM_001057939.1 GI:115455606 GeneID:4334258

Length

3643 bp

Definition

Oryza sativa Japonica Group Os03g0770800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32781531..32785173

Sequence Coding Region

32781794..32782414,32783213..32783326,32783419..32783709,32783801..32784109,32784201..32784613
,32784926..32784968

Expression

GEO Profiles:Os03g0770800

Genome Context

<gbrowseImage1> name=NC_008396:32781531..32785173 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32781531..32785173 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgtggagcggcttatggggcgggaagttggccgccgccggcgagagccccgtgctccgctcccgcttctacgcgttcatcagggcattcgtcgtcctctcggtgctcctcctcatcgttgagctcggcgcctacatcaatggctgggacgacctcgccgcctccgcgctcgccctccccgtcatcggcgtcgagtcgctctacgcgtcgtggctgcgcttccgcgccacctatgtcgcgccattcatccagttcctcaccgacgcatgcgtcgtgctcttcctcatccagagcgccgaccgcctcatccagtgcctcggctgcttctacatccatctcaagcgcatcaagcctaaccccaagtcaccggcattgcccgacgccgaagaccccgacgccgcgtactaccccatggtactcgtgcagataccaatgtgcaacgagaaggaggtttatcagcaatcaattgcggccgtgtgcaatcttgattggccgaggtccaacttcttggttcaggtattggatgattcggacgatccgacgacgcagacactgatcagagaagaggtgctcaagtggcagcagaacggcgctcggattgtgtaccggcatcgtgtccttagggatggttataaggctggaaatctcaagtcggcgatgagctgcagctatgtcaaggactatgagtttgttgccatctttgatgcggacttccaaccgaatccggacttcttgaagcgaaccgtgccacatttcaaggacaatgatgaattggggctagtgcaagcaagatggtcatttgtgaataaggatgagaacctattgactcgtctgcaaaacattaatctttgcttccactttgaggtagaacagcaagtgaatgggatattcctaaacttcttcgggttcaatggcactgctggtgtgtggagaatcaaggcattggatgactcgggagggtggatggagcgtacaacagtggaggacatggacattgcagtccgggcacaccttaggggctggaaatttatcttcctgaatgacgtcgagtgccaatgtgaattgccagagtcatacgaagcttataggaagcagcagcatcggtggcattctggtccaatgcagctattcagactctgcttaccagacattatcaaatgcaagattgtgttttggaagaaagccaacttgatcttccttttcttccttctccggaagctcatactaccattctactctttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcctgactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccgaagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaattcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgaccaagaagtcaggccgatcatcggagggcgacctcatttctttggcacccaaagagttgaaacaccaaaaaactgaatcggcgcctaacctcgacgctattgcaaaggagcagtccgctcctagaaaggacgtaaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaaccgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttccagggcatatctttcttgttagtaggccttgatctcataggcgagcagattgagtaa</cdnaseq>

Protein Sequence

<aaseq>MAPWSGLWGGKLAAAGESPVLRSRFYAFIRAFVVLSVLLLIVEL GAYINGWDDLAASALALPVIGVESLYASWLRFRATYVAPFIQFLTDACVVLFLIQSAD RLIQCLGCFYIHLKRIKPNPKSPALPDAEDPDAAYYPMVLVQIPMCNEKEVYQQSIAA VCNLDWPRSNFLVQVLDDSDDPTTQTLIREEVLKWQQNGARIVYRHRVLRDGYKAGNL KSAMSCSYVKDYEFVAIFDADFQPNPDFLKRTVPHFKDNDELGLVQARWSFVNKDENL LTRLQNINLCFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALDDSGGWMERTTVEDMDI AVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIKCKIV FWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLN ILPSPKSFPFIIPYLLFENTMSVTKFNAMISGLFQLGNAYEWVVTKKSGRSSEGDLIS LAPKELKHQKTESAPNLDAIAKEQSAPRKDVKKKHNRIYKKELALSLLLLTAAARSLL SKQGIHFYFLLFQGISFLLVGLDLIGEQIE</aaseq>

Gene Sequence

<dnaseqindica>2760..3380#1848..1961#1465..1755#1065..1373#561..973#206..248#gcttcttcttgagcttaaatggcagtgggatcagctgcgtaggtgtgagggggagggattggcattgaggggtggggggaggtggaggtccaggaatagggtgtgggtgaagtgtgggaggctaatttgggggtgagagaggagaaggagaggtgaggggtggggggaggaggagggggaggctggttcttggaccggccattggatggcgccgtggagcggcttatggggcgggaagttggccgccggcggcggcggcggcggcggcgaccactaccggggcacgccggtggtggtcaagatggagaaccccaactggtccatctccgagatctcctcgccggatgacgacgacgacgaggagttcttggtcggcggccgccgcaagggggggcgcggcaagaacgccaagcagatcacctgggtgctgctgctcaaggcgcaccgcgccgccgggtgcctcgcgtcgctggcctccgcggccgtcgcgctcggcgccgccgccaggcggagggtcgccgccgggaggacggacgccgacgcctccgccgccgccgccgccggcgagagccccgtgctccgctcccgcttctacgcgttcatcagggcattcgtcgtcctctcggtgctcctcctcatcgttgagctcggcgcctacatcaatggctgggacgacctcgccgcctccgcgctcgccctccccgtcatcggcgtcgagtcgctctacgcgtcgtggctgcgcttccgcgccacctatgtcgcgccattcatccagttcctcaccgacgcatgcgtcgtgctcttcctcatccagagcgccgaccgcctcatccagtgcctcggctgcttctacatccatctcaagcgcatcaagcctaaccccaagtcaccggcattgcccgacgccgaagaccccgacgccgcgtactaccccatggtactcgtgcagataccaatgtgcaacgagaaggaggttggtttgtgctgttgctatcgctctaaaacatgccattttttgtctccgaagtagcaaccttttgatgtttgtttgttggtctgtccaggtttatcagcaatcaattgcggccgtgtgcaatcttgattggccgaggtccaacttcttggttcaggtattggatgattcggacgatccgacgacgcagacactgatcagagaagaggtgctcaagtggcagcagaacggcgctcggattgtgtaccggcatcgtgtccttagggatggttataaggctggaaatctcaagtcggcgatgagctgcagctatgtcaaggactatgagtttgttgccatctttgatgcggacttccaaccgaatccggacttcttgaagcgaaccgtgccacatttcaaggtaaattgagatgaattttgtgcctatagtttgtggtgataatgtatatggtttagggttctaattatgattcatttgtttgctgttgcaggacaatgatgaattggggctagtgcaagcaagatggtcatttgtgaataaggatgagaacctattgactcgtctgcaaaacattaatctttgcttccactttgaggtagaacagcaagtgaatgggatattcctaaacttcttcgggttcaatggcactgctggtgtgtggagaatcaaggcattggatgactcgggagggtggatggagcgtacaacagtggaggacatggacattgcagtccgggcacaccttaggggctggaaatttatcttcctgaatgacgtcgaggtactatatatgacaaactttctgaataacttgttgggttatgtttcttcaccttttcagttgaaataacccatttccctcattatggacagtgccaatgtgaattgccagagtcatacgaagcttataggaagcagcagcatcggtggcattctggtccaatgcagctattcagactctgcttaccagacattatcaaatgcaaggtactgatttgctcttatttgttgtagtactttatttttgtaaacatctaaacaatgaacttatataaccaaatgttgttatgagatatccgattggtctggataaatatatctgttaatgcaaacacgaaataaaattaaggctttacagcattttttcccgtatccattctgtgcaactttgtcttcaaatagcatgtcagatatatcatttaatccgtttattacttaaagtgaaaatttgaacatcaacaggtaaataatgtgatcttgacaaaaaaaagtgtgttcggtgcttttgttggatacacaacacgcgctcatggcatcgcgaatatgctccaaggatgttaacatgatgaaattctaaaatgttagaggtttttttatactctttaactgattctcgaaatattaattcacatattgatatgtcctgtaccattagccttttctctcaagtacttaggtttatacacttcaataaagacgcatgctcatcgagcagcatccatctcactagaatataaaatgttgatatctaattgtatatcatttgtgcgcatgttacaactggacctttttttgcattaccatgatagaatatgaatttgcttatcaccttttgttgtcattgtcatcaaaataatgtactacctgataggatgtctggatgaaacaactgacttgttgatagctctgttttaccaatctgattgctagatgaaacaactggcttgttgatagctctgttttaccaatctgattgcttattaattttgttttattctgctgcagattgtgttttggaagaaagccaacttgatcttccttttcttccttctccggaagctcatactaccattctactctttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagccgagcttcctgactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcctgccttctccgaagtctttccctttcatcatcccatacctacttttcgagaacaccatgtccgtgacaaaattcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtgggtggtgaccaagaagtcaggccgatcatcggagggcgacctcatttctttggcacccaaagagttgaaacaccaaaaaactgaatcggcgcctaacctcgacgctattgcaaaggagcagtccgctcctagaaaggacgtaaagaagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaaccgctgcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttccagggcatatctttcttgttagtaggccttgatctcataggcgagcagattgagtaaactgtgaaaagcatgatagatgttaaaaaaacagtgacaatggagggtgctccagggatgttgtgtcgaagctctttggcgatattgaaatgttgcatgacgcaattgtgtcgtccaattgatttatgtcacgacttcacacaacatgatccacaatgtacacgcccaaataggcccctcccccctcggttgtgtagatatagttgttcttggactgtaaatttgcctagttattccaagactatccgattcttttgtaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0770800, RefSeq:Os03g0770800