Os05g0152400

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0152400| Description = Glycosyl transferase, family 14 protein| Version = NM_001187294.1 GI:297723718 GeneID:9269774| Length = 2581 bp| De...")
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Gene Name

Os05g0152400

Description

Glycosyl transferase, family 14 protein

Version

NM_001187294.1 GI:297723718 GeneID:9269774

Length

2581 bp

Definition

Oryza sativa Japonica Group Os05g0152400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3008970..3011550

Sequence Coding Region

3008970..3009450,3010403..3010478,3010550..3010677,3010742..3011255,3011481..3011550

Expression

GEO Profiles:Os05g0152400

Genome Context

<gbrowseImage1> name=NC_008398:3008970..3011550 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3008970..3011550 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtctgtcttcttcctcctctccctcctcctcctcctcttctcctcctccccgccgcgcctccgcctcccgggccccgccgccgccgccccgtccctcgccgacgacctgcgctgcggccacggcgcgccgccttgcctcgcgtacctcctcgtgggtgcccgcggcgacggcgcgcgcctcctcaggctcctcctcgcggtgtaccacccgcgcaaccgctacgtgctccacctctccgccgacgcctccgactccgagcgccgtgacctcgccgcctgggtcgccgccgccacccccgccgtgggtgcgttccggaacgtcgccgtcgtgggcgcgcctaccgccgggacgcccgtcggctcctccggcctcgccggcacgctccgcgcagccgccgtgctcctccgcctccaccccgattgggattggttcatcaccctcaacgccgccgattaccccgtcgtcacccaggacgacttgatttatgtcttatcaaatgtttcaagacagtttaacttcgttgatcacaccagtgacattggacagaaagagtcagagaaggttcaatcgatgatagtggatgcaggaatttacttggccgggaggaccaactttttccgagcttcagagaaacggccaacacctgatgcttttaagttcttcacaggcatttcctgctgttctccatgggttattctgaaccggcagtttatagagtactgcattcttggttgggagaatcttcctcggattcttcttatgtacttcaacaacattatgctacctcaggaaggatacttccactcagtcatatgcaactcacttgaattccgaaatttcactgtgaacaatgacctgaggtacaaagcgtgggacaatccacctcagacagaacctgttttcctggacatgacacattatgacaagatggtggatagcggggcaccttttgcaaggcgttttcgtgagaacgagtcgttgctggataagattgacggtaacgtacttgggcgttggggtcatgggcctgttcctggtgcctggtgctcaggcaggaagagctggttcagcgacccatgttcccagtggagtgatgtgaacatcgtcaggcctggacctcaaggcatcaagctccgtcaatatataaatcgggctttagaaggaggagaatttggcagcaaatcatgcaggagcaagttcatttctgactcctcaatgacactgaaggcagagctgagagcaagcagtaaccgaagcttatag</cdnaseq>

Protein Sequence

<aaseq>MVSVFFLLSLLLLLFSSSPPRLRLPGPAAAAPSLADDLRCGHGA PPCLAYLLVGARGDGARLLRLLLAVYHPRNRYVLHLSADASDSERRDLAAWVAAATPA VGAFRNVAVVGAPTAGTPVGSSGLAGTLRAAAVLLRLHPDWDWFITLNAADYPVVTQD DLIYVLSNVSRQFNFVDHTSDIGQKESEKVQSMIVDAGIYLAGRTNFFRASEKRPTPD AFKFFTGISCCSPWVILNRQFIEYCILGWENLPRILLMYFNNIMLPQEGYFHSVICNS LEFRNFTVNNDLRYKAWDNPPQTEPVFLDMTHYDKMVDSGAPFARRFRENESLLDKID GNVLGRWGHGPVPGAWCSGRKSWFSDPCSQWSDVNIVRPGPQGIKLRQYINRALEGGE FGSKSCRSKFISDSSMTLKAELRASSNRSL</aaseq>

Gene Sequence

<dnaseqindica>1..481#1434..1509#1581..1708#1773..2286#2512..2581#atggtgtctgtcttcttcctcctctccctcctcctcctcctcttctcctcctccccgccgcgcctccgcctcccgggccccgccgccgccgccccgtccctcgccgacgacctgcgctgcggccacggcgcgccgccttgcctcgcgtacctcctcgtgggtgcccgcggcgacggcgcgcgcctcctcaggctcctcctcgcggtgtaccacccgcgcaaccgctacgtgctccacctctccgccgacgcctccgactccgagcgccgtgacctcgccgcctgggtcgccgccgccacccccgccgtgggtgcgttccggaacgtcgccgtcgtgggcgcgcctaccgccgggacgcccgtcggctcctccggcctcgccggcacgctccgcgcagccgccgtgctcctccgcctccaccccgattgggattggttcatcaccctcaacgccgccgattaccccgtcgtcacccaggacggtatggtcatccaaaaatatcttcagtttttttttctttctcagaatttctcgtctctatttatatggatcatatgtattcaagtctcatttctgtccagtatcaattcaccaaatgctgcatttgatttgcattgccttgtttcattttgatcagaattggccactttaatttcatctatgtatctatggtaaaaattaaaagctacttttaccagctacatttgtatagattaaccacaatcaaatggagtgtccaattgtccttatttgtatagattaacatcaaccgaattttaaacaaacaggcaacagcggatattttgcttaggtcctagtgccttttactcacgcagatcttgtgtcatttggttatttgttgccacttgccaaggtagtaggtagagcttcatatgtttatgcattccaagtaaaattgcatgttagaagtaaattctggcccctctcatcagtttgttttgaacttttcttgtctctaaagtgaaatagataatgcacatgccggaactagttttgtgaaaaagaaaaacgatagggtatcactgagcgactaacaggaatacgtatgagtagttagagccatgaggatggtttggaaatcatgttaatatatgtatgcatttacctttataatatgggggttctgaattcatagtcgtgtactcttcaataataccacatccattcatgaaacaagtcaggatttgccatccatttcttttggcatttgaggatttgaaattcttccttgtctgctcaaaagacagaaagattgatctgtgaaactcttcacagctcacgacttatcaagaacatttcacagttgtattacaagcatgtgttccttttactctcatttttaagcaagtggacatacttttatgcaagtttgttctgatcatggcattcttataccttttgtcctattgcagacttgatttatgtcttatcaaatgtttcaagacagtttaacttcgttgatcacaccagtgacattggacagaaagagtatggattatctgaattagaaagaattctttattctaatagtactagttttgaatttttttttacttcaggtcagagaaggttcaatcgatgatagtggatgcaggaatttacttggccgggaggaccaactttttccgagcttcagagaaacggccaacacctgatgcttttaagttcttcacaggcatttcctgctgtctgtgcttttgttttggttcgtgggatagtttgctcacccatgatctatgtttccttgataggttctccatgggttattctgaaccggcagtttatagagtactgcattcttggttgggagaatcttcctcggattcttcttatgtacttcaacaacattatgctacctcaggaaggatacttccactcagtcatatgcaactcacttgaattccgaaatttcactgtgaacaatgacctgaggtacaaagcgtgggacaatccacctcagacagaacctgttttcctggacatgacacattatgacaagatggtggatagcggggcaccttttgcaaggcgttttcgtgagaacgagtcgttgctggataagattgacggtaacgtacttgggcgttggggtcatgggcctgttcctggtgcctggtgctcaggcaggaagagctggttcagcgacccatgttcccagtggagtgatgtgaacatcgtcaggcctggacctcaaggcatcaagctccgtcaatatataaatcgggctttagaaggaggagaatttggcagcaaatcatgcaggaggtaatgatcccatggttgagaactctgagccttttccatttctctactgaaggtctctccattctacagaataagcagtgttttttcattgatctgaaatgaacaaactgcagctgaaaagatgtgcacagatatatagctgtggtcttatggagtgctggggtaatctttctgaacatttttgtggtcactatcataatcttggctcaagaatttcactttcagcaagttcatttctgactcctcaatgacactgaaggcagagctgagagcaagcagtaaccgaagcttatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0152400, RefSeq:Os05g0152400