Os05g0153600

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0153600| Description = FAR1 domain containing protein| Version = NM_001061215.2 GI:297603864 GeneID:4337841| Length = 2035 bp| Definition ...")
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Gene Name

Os05g0153600

Description

FAR1 domain containing protein

Version

NM_001061215.2 GI:297603864 GeneID:4337841

Length

2035 bp

Definition

Oryza sativa Japonica Group Os05g0153600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3074878..3076912

Sequence Coding Region

3074878..3075114,3075637..3075747,3075987..3076086,3076197..3076246,3076330..3076620
,3076760..3076912

Expression

GEO Profiles:Os05g0153600

Genome Context

<gbrowseImage1> name=NC_008398:3074878..3076912 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3074878..3076912 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgagtttcgtggcacaggcaatgaagatgatgctaaatgtggcacaggcaatgaagatgatgctaaatgtggcaaggattgttcaactgattcgtacatggacaattcgtccaatacaaatgatgatgactatgctgaatgttccttgggagaccacaataaatctaagcctaatgatcctagtagcagtcacaatgtgttccacagcgttgaggaagataatgtagctctagatgagtactggaatatagttcaaatgaattttcagactgaagatgaatgttacaacttctacaatagttatgctaaaaggaaaggttttagtgtgaggaaggatattgtgaggcgtgaaaaaagagttggagctatcgaatacaggcgttttgtttgctctaaggaggggattcgagatcctagtttggtaaaacctgaggatcgtgagtttgctttgcaggaggactttgagtatggggtgtacgatgaccagactaatatggtggaacaaattatccaactggagataagaaggtcttctgggaggatgtctctgaatggtatcaagaaactgaacctcctcagggcttccaagcaaattcatgccacagaacacacctggttaattatatgtagacaagatttggcccttattgagagtctgaaaattgttgtaatattgtatgacataaatttacactgtttggagactcttcaggtgaaagatggggagttgcagaatttggccaacaatattcgtgctcgggatgctacaattaaggaaatagcagataaattaacacagactgcacaggctgcggaagctgctgcttctgcaactcatacgatggatgaacatagaagacttctatgttcagagattgagcgcctaagacattacaagcaatggaaagacaaatgtaacaatccatgctcaaggtaa</cdnaseq>

Protein Sequence

<aaseq>MGEFRGTGNEDDAKCGTGNEDDAKCGKDCSTDSYMDNSSNTNDD DYAECSLGDHNKSKPNDPSSSHNVFHSVEEDNVALDEYWNIVQMNFQTEDECYNFYNS YAKRKGFSVRKDIVRREKRVGAIEYRRFVCSKEGIRDPSLVKPEDREFALQEDFEYGV YDDQTNMVEQIIQLEIRRSSGRMSLNGIKKLNLLRASKQIHATEHTWLIICRQDLALI ESLKIVVILYDINLHCLETLQVKDGELQNLANNIRARDATIKEIADKLTQTAQAAEAA ASATHTMDEHRRLLCSEIERLRHYKQWKDKCNNPCSR</aaseq>

Gene Sequence

<dnaseqindica>1799..2035#1166..1276#827..926#667..716#293..583#1..153#atgggtgagtttcgtggcacaggcaatgaagatgatgctaaatgtggcacaggcaatgaagatgatgctaaatgtggcaaggattgttcaactgattcgtacatggacaattcgtccaatacaaatgatgatgactatgctgaatgttccttggttagttcactatctgcacatgtccatagagtgcttatcatttatttgttggatttatgcaattatttatacatgttgtaatttagttttttatcacgttagctcatagtattggggttaaatactttttttataatagggagaccacaataaatctaagcctaatgatcctagtagcagtcacaatgtgttccacagcgttgaggaagataatgtagctctagatgagtactggaatatagttcaaatgaattttcagactgaagatgaatgttacaacttctacaatagttatgctaaaaggaaaggttttagtgtgaggaaggatattgtgaggcgtgaaaaaagagttggagctatcgaatacaggcgttttgtttgctctaaggaggggattcgagatcctagtttggtaaaacctgaggatcgtgtaagaagggaaagagcgttgactcgaatggaatgccctgctattgtgctgtgttgtctgaataaatggtttgatactgaaaggagtttgctttgcaggaggactttgagtatggggtgtacgatgaccagacgtatcataaaacccaaggttccattttttgaactatcttgccagttatccttttgtttaattgaaatgcataatcatgttcatttgtgctaatttttcattcttatgtagtaatatggtggaacaaattatccaactggagataagaaggtcttctgggaggatgtctctgaatggtatcaagaaactgaacctcctcagggcttccaaggtagtagacattggaactcctcaaaaaaagattactctctttgttctgaaactcctgatgctgcaaaggcattgtgccattcatttacaaatgcgaattcctaaacattactgcaaacacatattgagaacgggcaaatgaatgcattacatcgttgctgccaatctgtgctagtgtaatattaggttggttgcctcaggctagattgtcagattaatgtatcctgtataaacttgtagcaaattcatgccacagaacacacctggttaattatatgtagacaagatttggcccttattgagagtctgaaaattgttgtaatattgtatgacataaatttacactgtttggtatgatttgttcaacaatggtactcctagtctcctggcagctgtggaaggaacgaaactccagggttttcgactctgcgctcgcttcggtcacagtggttctggagtccatccgctcagagggccagctatggtctttagccggcgttgcttttttttggggatttcttgggactgtagcgtggctctgccccctcccgctgtttggagttgcgtttttaaccgtcgtagtagttcctagcttcaagtcccccccccccctttttaggcataagccagtctggctgattgctttgtgtaacaaaaactcttttcctgctaatatattgacgtgcaatccttttgcgcgttcgcaaaaaagatttgttcaacaatgttctcattgctaaacatttaagatggttacatctttgcttgttaggtttcaattttcatgcatgtgctgctaggcacgtggttggttattcttgattttattcacgagcattattttaacaattttctacttttcatattccataggagactcttcaggtgaaagatggggagttgcagaatttggccaacaatattcgtgctcgggatgctacaattaaggaaatagcagataaattaacacagactgcacaggctgcggaagctgctgcttctgcaactcatacgatggatgaacatagaagacttctatgttcagagattgagcgcctaagacattacaagcaatggaaagacaaatgtaacaatccatgctcaaggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0153600, RefSeq:Os05g0153600