Os03g0795000

From RiceWiki
Revision as of 19:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0795000

Description

Biopterin transport-related protein BT1 family protein

Version

NM_001058079.1 GI:115455886 GeneID:4334410

Length

5497 bp

Definition

Oryza sativa Japonica Group Os03g0795000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33916072..33921568

Sequence Coding Region

33916556..33916840,33917632..33917724,33917801..33917969,33918576..33918824,33918901..33919049
,33919620..33919782,33919877..33919941,33920136..33920257,33921266..33921365

Expression

GEO Profiles:Os03g0795000

Genome Context

<gbrowseImage1> name=NC_008396:33916072..33921568 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33916072..33921568 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgcggtacgccgccgccgcccgccggagcctcgctgccgctcgcaggagatggcgtccagcggcggcggaggaagctccggggggctcggctctgagggtagatttgtccgccgataatgtggctgttgctatcgtttatttcgtgcaaggagttttgggtcttgcgaggcttgctgtgagcttttacttaaaagatgatcttcatcttgatccagcagagactgcagttatatctggtttatcagcgttgccatggttggtcaagccgctttacggttttatcagtgattccatccctctctttggatatcgaagaaggtcttaccttattctatcaggactcctcggagctctttcgtggagtttgatggcaacaattgtggatgataaatacagtgcagcactctctattattcttggatctctcgcagttgccatcgctgatgttgtggttgactctatggttgttgagagagctcgtggtgaaccacagagtacatctggatctctccagtcattgtgttgggggtcatcagccattggaggagttatgagtgcatacttcagtggttctctagttgatacttatggcgtaagatttgtctttggtgttacggcatttttgcccctcatgacatctactgttgcagttcttgtgaatgaaaagcgtttgcctttgggagaaaatgctacctcatcttcagattcagggttaattgagagctctaaggagcacattatgcagatttggagttcagtaaagcaacccaatatcttcctacccaccttgttcatattcctttggcaagcaacaccacaatcagattctgccatgtttttcttcatcacaaataagcttggattcactccagagtttctagggcgtgtcacgctcgttacatctattgcatccttggtcggcataggagtatataattcatttttgaaggaagttccattgagaaaaatcttttttgtgactacaatatttggttctgcccttggaatgacacaggttcttcttgtcactgggctcaatcgagttcttggaatcagtgatgaatggttctccattggtgattccttgattatcactgtccttggtcaggcttcctttatgcccgtgttggtgctggctgcaaagctctgccctcctggagtggaagcaactttgttcgccactctgatgtccatttccaacgctggaggcgtcaccggtggtctgttgggggcaggcctgacgcagttcttgggagtcaccaaagacaacttccaaaaccttgctcttctgattgtcgtgtgcaatctcagctccctgctgcctctacctcttctgggcctcctcccggatgaatcacccggtgtagataatgagcaaacaaaagtcgattga</cdnaseq>

Protein Sequence

<aaseq>SRYAAAARRSLAAARRRWRPAAAEEAPGGSALRVDLSADNVAVA IVYFVQGVLGLARLAVSFYLKDDLHLDPAETAVISGLSALPWLVKPLYGFISDSIPLF GYRRRSYLILSGLLGALSWSLMATIVDDKYSAALSIILGSLAVAIADVVVDSMVVERA RGEPQSTSGSLQSLCWGSSAIGGVMSAYFSGSLVDTYGVRFVFGVTAFLPLMTSTVAV LVNEKRLPLGENATSSSDSGLIESSKEHIMQIWSSVKQPNIFLPTLFIFLWQATPQSD SAMFFFITNKLGFTPEFLGRVTLVTSIASLVGIGVYNSFLKEVPLRKIFFVTTIFGSA LGMTQVLLVTGLNRVLGISDEWFSIGDSLIITVLGQASFMPVLVLAAKLCPPGVEATL FATLMSISNAGGVTGGLLGAGLTQFLGVTKDNFQNLALLIVVCNLSSLLPLPLLGLLP DESPGVDNEQTKVD</aaseq>

Gene Sequence

<dnaseqindica>4729..5013#3845..3937#3600..3768#2745..2993#2520..2668#1787..1949#1628..1692#1312..1433#204..303#ggggagggagaaggcgcggtggagcggagtccggaggaaacgcaaggagaggagaggagcagaggaggcgaagctctcgccacgcgctcgcgtggacgacgagatgatggccttcggctcgctgctgctctcgccgccgccgccgccgccgccgccgccgtccctcccgctaccggccagaccctccgccgcgtcgtacctagtcgcggtacgccgccgccgcccgccggagcctcgctgccgctcgcaggagatggcgtccagcggcggcggaggaagctccggggggctcggctctgagggggaatccgctgcggcttctgctatcggttccctggacctcgacggcgctgccgcgtcctcggacaaccgacctggtgagttgctggcgaaaatgtattggaattgtgtttcgaattcagttcgtgtgtgcaacagtgcaagggttggggtttgagcaaaattgacccaactaggaactagctgaggagcaattcctcgaaattttagggctacgaatttttaagttgtgaacctgagggatgtagccatactaatgctgggatagagattccctcttctaatcacttttgagctgctgactaatatgtagtaacttgctaattatgtatgaactgaacactataattgtgagacggagagactcaacgtagattagattaatcacggagtgtttacatatataagcctgtccataaccgtatcaataattttgcatatttaaactgtattgtctaacaataattttatcttacagttatatgcatgcagcggcactaccttaaacatttccttgttcaacgtcttcgtagtgtaattattatcagggtgtctacgcagcgttattagccatcaaaacaattgttctatatgtgcttttagccgtgggacattactttgtagtgggattgtttttttattatgactcacttagcacaaggatctatctaatacagtagtgacagtgtttgtcaaatcctgttctgatttgcccatttagttatttccgtaagtgtaacaccagtgtgtagttcaagttctgtttcgtgtttctgaaactacttattatttagttgtaaaaattggcttatgttgtagtcattcttaacatggtacctattgtaggaagcacgagttctttctagatattatatgattcatatcaggtaactttgagtgcaggggaaacatctagcaatggagattctgagaggtggcaaacgagacaacatagtacagatgatatttccaggagcaagtccaagccaagatacatcaaagcatttggggtagatttgtccgccgataatgtggctgttgctatcgtttatttcgtgcaaggagttttgggtcttgcgaggcttgctgtgagcttttacttaaaagatgatcttcatcttgatccagcagaggtatggtggcaactccttcagtctctttcgagtctctgggcatgcgtgcttttgtagttttgttccatttgagcttagcagtagggttcatggaaaatatttcttagaagttggaaagatattttttctctttgaacattttaactcttggataatatgtgttggcacagattaagacaaattgtgttgtctagactgcagttatatctggtttatcagcgttgccatggttggtcaagccgctttacggttttatcaggtctcagcaaaataccatatcttctttctaacattcttttatagtttatgtgtcacttatctatgaagctatattgtttcgatttccattgcagtgattccatccctctctttggatatcgaagaaggtcttaccttattctatcaggactcctcggagctctttcgtggagtttgatggcaacaattgtggatgataaatacagtgcagcactctctattattcttggatctctcgcagttgccatcgctgatgttgtaagtgagaacagaaaaaaaaatgtgctcacaatagtttatttgttcatcggtagttgtgtgttataatctgggtaatccttaaccttcagctaaatgataatatgataactatccttttattatataaatacaatcatatttagaacttaaaactttcagttcagtaaacctaaggttagggaggttgttttctgagttttttttaaagttacttaatctgtatagtggcacataatcctcttgaatctcttctcataatgtcctatttactaagctgcaatttgcatcaatagcacgatagttccttcattgacatgacaagtttttgttgagtcctaagaaactcaaaatatgtggttgacatattgttaccatttatatatcaatatgttaaatacctcagttcagttcaggcctcacacgttaagcatggtttccaaaatttatctgaaaacagaaagatctgtttttatgccatgttctgaaatcatttctgttctcaccacatgttatggcagaagtgtttgttcttctgtttgtttccatatttacatgaaactactgcaggtggttgactctatggttgttgagagagctcgtggtgaaccacagagtacatctggatctctccagtcattgtgttgggggtcatcagccattggaggagttatgagtgcatacttcagtggttctctagttgatacttatggcgtaaggtttgccctataacaaaaagcatacgtagaactcttcattttaacagttcactgatctgaggttccccaaatgcagatttgtctttggtgttacggcatttttgcccctcatgacatctactgttgcagttcttgtgaatgaaaagcgtttgcctttgggagaaaatgctacctcatcttcagattcagggttaattgagagctctaaggagcacattatgcagatttggagttcagtaaagcaacccaatatcttcctacccaccttgttcatattcctttggcaagcaacaccacaatcagattctgccatgtttttcttcatgtatgttctcacatgctcacttgtttggtttgattgctctagacagctgttggattaggttttcaaccagtgaacagatttacaactgttggaagagttgaattctagttggtcacatagtgctttaacttttgtttagcttgtcccagcgatttcaattgaagatattgtctaccatgctaaaatttcatttcttaagaacactagaggtctgagctgccctctttgtgccaccattattagtcaactgaacttcctttgggtatagtagattagttcctagcaaaaactggaggtaaccaaatctgtggtatgtttgtcggtggtgtcaagaaaggggtcatataaatcatattcaccatacttcacaccaaagtaattagaaatgaatcgaatatgctattagcacaaatttctttgttctagctgaatactacatattgcattacccttcacttgtttagattcttgtacttcttaaattcataagaaacaagagttgaccataaattgctgtcttggtatattaacaccttataaatttgtctgattgctatctatttaaaatggtttgattttcatatgttgccttctgaccaatttcagcacaaataagcttggattcactccagagtttctagggcgtgtcacgctcgttacatctattgcatccttggtcggcataggagtatataattcatttttgaaggaagttccattgagaaaaatcttttttgtgactacaatatttggttctgcccttggaatgacacaggtcaaattctgcacatgcttgttttagtaaatgctgccactatattatttgttaaatttaacttaggtattttcaggttcttcttgtcactgggctcaatcgagttcttggaatcagtgatgaatggttctccattggtgattccttgattatcactgtccttggtcaggtacgataccctctttgcaagaactagtacttgatttggggagttggggtaaaccattagcagtttaacacattccctgctctttaaattgactactgtatgaagagcataaaaaaatgttgtatttctttgctcaataagaaaaatcctgatcaagctggaaggggattttcctaaggtaatactacctccgtcccaagtgcagccgtgggtatccgtgtccaacgtttgaccgtccgtcttatttgaaaaaaatatgaaaaaattgaaaaaaattagtcccatataaagtactattcatgttttatcatctaataacaataaaaatactaattattaaaaaaattcaaataagatgaacggtcaaaggttagacatgaatagtgcaaaactgcacttattttgggacggagggagtataatgcaagaaaatgtgctttcattttacatttttcatggcagccgatatagaagcctagttgctttacattgaagggtaacattacacctccatcctgtacatcctagtttctttacgtctgtaaataaaacagaatccctatcaataccacgctaggattagcatggaagatgctgctaagatccctccatttgccaaaacgtagaacttccacatttggagatgacacttctatgtgaacactacgaaattcatcataccaattttcagtattattcaaatgctgtacttaggccatggctatggcctttctagaaatagaactgcactctttatgtgcactcatgctgtgaaaaaattcgtcctgcaggcttcctttatgcccgtgttggtgctggctgcaaagctctgccctcctggagtggaagcaactttgttcgccactctgatgtccatttccaacgctggaggcgtcaccggtggtctgttgggggcaggcctgacgcagttcttgggagtcaccaaagacaacttccaaaaccttgctcttctgattgtcgtgtgcaatctcagctccctgctgcctctacctcttctgggcctcctcccggatgaatcacccggtgtagataatgagcaaacaaaagtcgattgagattatctccaagcatcggtcctacttgaatgcaggacatccaatcgcctctacgtgaactcagcggcgcaggggaattgggaatcaggctgcagctgaccttggccgttgcaatgttgatcaccctaccgaatagtatgtttagggtgatcagttgatgattggttccatggagatatacgcctcatggattagcggacttgccgcggttgttaactggtggttaggtcaggattgtgtgccgtcagagcatggacatggaagccgcagtgtacactagtgcaggtacgaccttttgttctttaccatgaaaaacggcagaagagtttcccgtgtattctgccacatccaaccgatagaagtagtatccatgttctgaactcttatcaagttatttgtacatgcaatgaaatgtagtgtatacagagattgtacatcgattcgtaactttctggaactgatttatgaaggtgtagccgtgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0795000, RefSeq:Os03g0795000