Os03g0796000

From RiceWiki
Revision as of 19:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0796000

Description

Similar to Ripening-associated protein (Fragment)

Version

NM_001058088.1 GI:115455904 GeneID:4334419

Length

7551 bp

Definition

Oryza sativa Japonica Group Os03g0796000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33961343..33968893

Sequence Coding Region

33961487..33961506,33966098..33966341,33968101..33968221,33968328..33968515

Expression

GEO Profiles:Os03g0796000

Genome Context

<gbrowseImage1> name=NC_008396:33961343..33968893 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33961343..33968893 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatcccgagaagaaggttgttcgcggcgacggacgagatattctgcctgttccaaggcacgatcgagaacatcgcggtgctgaagcagcagtacgggttgcacaacaagggctccaccgagatcaacatcatcatcgaggcttacaggacattgagagacaggggaccttaccctgcggatcaagtcgtcagagacatcaacggcaagttcgcgttcgtgctctacgattgctccaacaactccgtcttcatggccaccgatgctgatggtagcgttccattttattggggagttgatcctgacagccgtcttgtggtttctgatgatgacgaaattgtgaataaggcttgtggaaaatcctctgcaccattccctaaaggtttcttcttcaccacatccggaggactgcagagctacgaacaccctatgaatgaggtgaaaccagtgccgaggctcgacagcaagggggaggtatgcggcacaacgtacacggtcgacgcgaaggcgaagaaggatagcagcattcctagagttggcagcgctgcggattggtcctcgcaatactaa</cdnaseq>

Protein Sequence

<aaseq>MTIPRRRLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEIN IIIEAYRTLRDRGPYPADQVVRDINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDP DSRLVVSDDDEIVNKACGKSSAPFPKGFFFTTSGGLQSYEHPMNEVKPVPRLDSKGEV CGTTYTVDAKAKKDSSIPRVGSAADWSSQY</aaseq>

Gene Sequence

<dnaseqindica>145..164#4756..4999#6759..6879#6986..7173#gtatagaggatctcaatcccttgctggttgcaatagcacgagaaatatatataaaattaaggcaaaacggtgggagggcggaggtggttgaggtgaagcgaggcctcgccgcatctaccggagcggcgtagccggcgatcggagatgacgatcccgagaagaaggtgagtcggcgatgccccccccccccccccccccccccccccccccccccccccacactagcgaagtagcgctaatttaggattttaggtgatgtccaatcggagaggattttagggtttgtgcgcttgcaacatcgcgtgatgagctcatccgaggatgacttgtacttggcctgtcgagcagcacatcccctccgtgatctgctccaggacgccgcgcctctcctcgtcgctccacgcgtcgtctctcgccgccgcggcctcccaggcgccggggcccttgtgctcgacgtgcccacgcttgtacagcgcgacgcggcgcagcgccgacgtcgacgcctccatggcgaacctcacgagctggacatgccgcctctccgcgctccggaagcccatcaccaccagctccttcaaatggcggtgccgcgaagccgagttcggccatggcccggctgcaccacctcctcttcgctgtgatggtggacatggagggtctccagcaatggcgtcgcctcgacgaggaggcgtggccacgatgcgtcccaggatggaggcacgtcggcgacgaggagccgccgcagcttgggcatcggggcgaaagggctcgtcggcaagaacaagatccacatgtacggcccggtgaagcgcaggacgagatcggtgatgccattggcgttctggaggaactccctgatgctggggatcaagaagcgcagcctcctgcgctctatggccgggaacagctcgtccccttgcagggagccaatggcgtgctcgaggctcacgcgctggaggtacggcgcggcgtcggggtgcgtcagaaacacggcgtctccattgctggcgaggctctccagcatggggagcgacctgatctcgaccgccatgtagccgccgtcgacgacgagctccctgatccgcgacatcggcgcgtccaaggtgagcgggcacccgaatttccgggacctgcaggagctgagatgcagggattgcagctgcgggcacgcggcgaccacgcggtacacggcgggccgcgtcgagcacggcaatccttgcaggacgagagtggcgagcgagccaaacccctgcagcggagggggcaggcagttgcgaagcttgagcctccgcagccgcgacgcgccggggtcgcggctgatgcggcgaagggggaagctgtagaccggcggcgggtgcatgatcggccccgtcggcacggcggacacctcgaggtccgtgacgccccaggaatcgacggcggtgacgaccagctggttgatgcagggggaggcgtcgaagtcgaacacctccagcgacagcctggtcgcacgccggcgagccgccaagagggccctgacggagccggccatggcgcgcatggcgcggcgctcgtaccgcccggtggcggcgtctagcctcgcgcattctcctcgcgcgcggtgaccgacctcctggccttgccgcggatggcaaggcaccggcggtagcgcggcggcagcaggtcggtgactcggaaatcgagggcggggagctcgcgcgggacggccgcccagcgccttgacagcgcggcggtggcgagcgcgtcgcgggtgtcgaggcggcgcaggatgaggtggagcaggtcgtccgggagagcgctgaggcggtcctcgccgcaggctcgccgtcgccgccgatccttgttgctcctagtcctagccatcggagaacaaccccccaagtggagtagtattgctcttgctctgctctaatttctaaaattcagtgatgattcgtggtggggaatttgcgatcgatttatatagatgcgtcgacttgtcgaggggagggatccgattccgatctggggttgtggaccaccaatccgaaccgggcaagggatttggtatttttccccaaactcaagtacaggatttttaaacctaccaagattccaagaagatactagtactatttggaagagttttgtagggttggattcaaagtttcacaattctaataccatgcaccttccatgccggacgttggggttgtatacttttcatgaaatccgatcgaaaaccgacaaatttcgaacaaattttgtagaccaaaacttaattcaaattccctgtttcggtctatcttgtgtcaagtaccgatcgtttttttctgaaatttcgaatgggagcattgaaatttcaaccgacaattgaaagtatacaatagaagtaaacacatcgactagaaatttcaattcgtttataatcttatgttctaaaatagtcctcggtattcagtaccgatagggtttacttggccttcaattgagatctggtgacataccgtcacacagtttataaaacatatattgatcgaattatcatattagattatatatataaactacagctatataaaataaacattttgataaataaaactaacaaatattccttcgatcccacaatataagtatttctaattatgaatatgaaacagttgtctgtttagatttatagctaaaaattgctatttttttgaacggatgtagttatattttaggatagaggtaatagcttacaacaaggatctaagaaatgtatttttttaatgcgggaagaaataatcaggataatagttagatgtagcagataaaaagaacatttcttaagtatattttttaaaatatttaatatatcattataatcgagtagatattttttcgctcaataatctgaatcaaagtaggccaaacttagttattttcgattactttgctagattaattatttgatctacatctctaaacatatgttttctaaaaaaacacttttcactgtatttttagaccacttatttcatgctatatattttgttgagtctgtctaaatttgttaaatttgtcactctattcgagtaaataatccgcaataatagtctgacctacaatttttttcaaacatgatgttaaaccattttcagtttttaatttttgtttttctttgttagttctgcaaacaccttgtgttctcgtgattcagctaaatctcttcctgaagaacggtctgatatatgatgagtcattcttcccaacttataaaggattatcacgagatatctagcattatctaggatgccagattgctactccacgtacgctactcaagtactcatccaacgtattggccatggccaacattaacaacatgcctaaggctaaggttgtcatacagctcagagagacattttactaatgtcaaaatttacaaagttactcccttcgtctcaaaatataacaacttttagctctcaggatttgttccaaaatataacaacttctccatcaacattgttttcccaaccaatcacaatcttgcacaattcacttttctcacctaccttcactactcattcaattataacccctataattcacttctacatactttcttaataactgtgtccaactctaaaacttcttttatattttaagacggatggagttttttttttctctttgatcggaaaaatttacgatggttggaaaacgaaacaagcccatattgctcttgcacaccacggttcggccatttctgaagggcccctcatgcctccccctcttcatcttttccttttcttttttcatttgaggcccacctgttaggaataagaggtttgttctcgtatttattatacttttcagatcgggttgaaaacacatatttttcatcaaattaaaaaactcaaattatttttttaacttttttataaaatttatttgaattacatcaacttttgttgggtaatcaatgaattccacgaaatcctatgatacgctggcgacggattttggtccgcaagggactgtgaagtgtgattgtgtgaaccctggtattcaccgtcagatgcgaatactagaaaaaaaacctaatcccctagtataaaataattataagaggtgaggcttcgaagctagatcatctccaccaccttatagagctagccggatgacacctgcacttttctcaaggtcttcaccgtcagtcagtcacctcgttcctcgtcgtgtgcctatccattttcgcgccctacggctacgagtgcggtggtcgtcacagcccacagccacaggcgctttgtagcgacgtgtggatccgtctcgatccttcgcgtcgccaccgtccttaccgccacacgccttccgtatatagctctcccgcggacgaacacctgtcgtgcactgcgcgcggggggtggcggacgatcggatcgggagaggacgcgacgcgaggcgggctgcgttgtgagggagagaagggatgctggcggtgttcgatcgggcggtggcgccgagccctgaggggctccggcatcccggggcggcgggggacggcgcggcggggctcgccgagaggttccgcgacgcgcgccccggcgccgtcaccgtcgccctcggccccggcggcgccaactccctcgcctactcctcccacggccagagccccctcctccccaggtgacccgctcgctcgatcccccccccccccccacctcgtgcgttctcgtttccaaatccgtggcgcgtttcgtctcctgatttgtggttgattaggttgttcgcggcgacggacgagatattctgcctgttccaaggcacgatcgagaacatcgcggtgctgaagcagcagtacgggttgcacaacaagggctccaccgagatcaacatcatcatcgaggcttacaggacattgagagacaggggaccttaccctgcggatcaagtcgtcagagacatcaacggcaagttcgcgttcgtgctctacgattgctccaacaactccgtcttcatggccaccgtaagtgaatttcagtctcagcgattaattcaatcatgttatatatgtttccatttctctgtttatgggtggacaagctagatttttattgttgcattaccagtatcctaatcgactgttctaatccaatttataggctttattaggcgtttaatagatcttgtgaatctccttttgagatgcatttggattggtattggaattatgcgcagtacatcagcttcctcaaggtggcaatacatataattgcacatttcagataacatttctttggattagatcgtcataaatgttcagataatgccttctttggataaatcacataaatggatgatcattcaacagtttcaacgtactatacctgttggttccatcctaaatctatattcagaacacacacacacacacacacacacataggtaaattaattggttctacatggagtatgggctccaagattcaaattgagtatatacccaatttgaatgagtatgaaatttttttaaatgtttagatatgaacattaacttctttactaacaagttcaaacaagtttgaactgagtttgaacttttttttttgttagattttggttctaggtatataacatccaaacatataattcgttaggtatgtaataatgaattgtgaaataaagttgagtttgagttgttttgctgttaggtatttgtatgaatcgaattcatatacctagatatatactccatggtgcccgggctccaaggtataaaacacacaaattctctcaaatttttaaaaattttcaaattgtgagtatatatctaggtatatgaattcgattcatacaaatacctaacagcaaaacaactcaaactcaactttatttcacaattcattatatgtatacccatatgggactccatggtgcccgggctccaaggtataaaacacacaaattctctcaaatttttaaaaattttcaaattgtgagtatatatctaggtatatgaatttgattcatacaaatacctaacagcaaaacaactcaaactcaactttatttcacaattcattattacatacctaacgaattatatgtttggatgttatatacctagaaccaaaatctaacaaaaaaaaaagttcaaactcagttcaaacttgtttgaacttgttagtaaagaagttaatgttcatatctatctaaacatttaaaaaaagttcatactcattcaaattgggtatatactcaatttgaatcttggagcccatactccatgtagcactagttaatttacccatatatatatacatacatatatatataatttcttgcttgacaaatactagactgccctgttcctggttagctgcagggcagaaccactttataagtgttgagatttcaaatcctgaagattgtcggctgacatctcaacaagatgcaagttgatgcatctttgacaaatactagactgccctgttcctggttagctgcagggcagaaccactttataagtgttgagatttcaaatcctgaagattgtcggctgacatctcaacaagatgcaagttgatgcatcacgaaatcacattccgtctgtttttgctagaaggaattttcgtgatacgcatataacttatcagatgtcactatgtcagcatattgcaccaatgtactatatgttctttcatttgttccggtcgtcgtctgttgtgattcgtagcattgagttgttgacagatgaattgatagctaagtcgatcttcttgcaggatgctgatggtagcgttccattttattggggagttgatcctgacagccgtcttgtggtttctgatgatgacgaaattgtgaataaggcttgtggaaaatcctctgcaccattccctaaaggtaatgaatgataagcttaatcaaccaatcaacaatatcacatcaattctcaaggcctggaactatgcctcttttatcaacacctgacgtgtaatggcttcatcaggtttcttcttcaccacatccggaggactgcagagctacgaacaccctatgaatgaggtgaaaccagtgccgaggctcgacagcaagggggaggtatgcggcacaacgtacacggtcgacgcgaaggcgaagaaggatagcagcattcctagagttggcagcgctgcggattggtcctcgcaatactaaaaccgtataaatcgtcagaagcatatggtatgatgacctagaaacctttgctgcaattacatggagagcactaggcttccgggttgtccacggttacaagtgggcatttgccatctgaaatgttcatctggatggtcagccttgtgctgtgctgctgtctgaaatttctgtcctgtccaccattactgaagaatgagagcgtgtgggtcttgaatttccaataaaacgcaatgccttacagatgtgtaaatagatgtttttgcttactacaatattttctgaacaatcagcatatctataactgtggctagaatgaatcatctctaacgatgtgtgttctgttacttctgtatgtgaagtgatcttcccttctgcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0796000, RefSeq:Os03g0796000