Os05g0155000

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0155000| Description = Similar to Protein MFP-b| Version = NM_001061222.1 GI:115462174 GeneID:4337848| Length = 8074 bp| Definition = Oryz...")
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Gene Name

Os05g0155000

Description

Similar to Protein MFP-b

Version

NM_001061222.1 GI:115462174 GeneID:4337848

Length

8074 bp

Definition

Oryza sativa Japonica Group Os05g0155000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3198062..3206135

Sequence Coding Region

3198410..3198448,3198576..3198714,3198899..3199047,3199494..3199615,3199738..3199859
,3200221..3200475,3200550..3200709,3200806..3200931,3201035..3201209
,3201358..3201444,3201586..3201888,3201981..3202036,3202255..3202336
,3202414..3202481,3203221..3203277,3203368..3203433,3203563..3203634
,3205805..3205901

Expression

GEO Profiles:Os05g0155000

Genome Context

<gbrowseImage1> name=NC_008398:3198062..3206135 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3198062..3206135 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagaaggggaggacggagatggaggtccggcccggcggcgtcgccctcatcaccatctccaaccctcccgtcaatgccctctccatccacgtcttgtatagcttgaaggaccactatgaagaagcacttaggaggaatgatgttaaagctattgttgtcacaggaaaaggaggagtattttccgggggactagacattaatacatttggtgctattcagagaaacaaagcggagcagctaaaggttgattatgtgtccatagatgtcatgactaatactcttgaagctgctggaaagccatcagtagctgctatcaacggtcctgctcttggtggagggttagaaatttccatggtatgtcaagcacgcatttcgattccaacggctcaattaggtcttccagagcttcaacttggagtgatccctgcatttggaggaacacaacgacttccccgccttgttggactaacaaaagcacttgaaatgatgctgatgtccaagcctattaaagccgaagaggcccatcagctggccctcatcgatgccatagtttcacctaatgatttgctgaatactgcctgccgttgggccttggatatatccgaatctagaaggccatgggtccataccctcagtagaactgacaagctagagtctcctgatgaggccagggagatcctcaagtttgccagagctcaggttcagaagcaggctgccaatcttcggcacccacttgtctgtattgatgttatcgaggaaggtatagtttcaggaccccaagctgggctacggaaggaagccattgctttccaggaccttgttttctcagatacatgtaaaagcttggttcatgtctttttttcacagcgtgcgacatcaaaggttcctgggatcacagacttaggtttaatgcctaggaaggtatctaaagttgccattgttgggggtgggcttatgggttctgggattgcaactgcactgatgctgagtaattatcctgttgtactcaaagaagtaaacgacaaattcttggacgcaggaattgacaggatcaaagcaaatttgcagagtcgtgtgaggaatgggaaaatgaccaaggagatatacgaaaaaacgctctcacttcttacaggtgtcgttgattacgagagattcaaggacgtagatttagttattgaggaaattgtagagaatgtgaaggtgaagcagcaagtgtttgctgacttggagcggtactgtccttcccattgtgtacttgccactaacacttctaccattgatcttgacctgattggagagaagacaaactcccaagatcgcattgccggtgcgcacttttttagtccagctcatgtgatgccacttctggaaatagtccgctccaatcatacctcaccacaagtagttgttgatttgctggatgtggggaagaagatcaagaagacaccagtagtggttgggaattgtaccggctttgcggttaaccggatgttctctccctatactagtatagcgctcttgcttgttgatcgtggaatggatgtttacaagattgatcaagtttgtaccgaatttgggatgccaatgggtccattcagattgctagacctggttgggtttggagtagctcttgcctctggcatgcagtaccttgagaactcccccgggagtgtcgacaagtcaatgctaattcctctcatgtttgaagacaaaaggacaggcgaagcctctcaaaagggattttacaagtatgagggtaatcggaaggccatccctgatcctgatatcttcaagtatgttgagaagtcaaggagaatggctggaactgtgcctgatcttgagctactgaagcttgacgacaaggaaatagtggagatggtgttcttccctgttatcaacgaggcctgccaggtcctcagtgagggcattgccaacaaagcctcggacctcgacatcgcctcaatcttcggcatgggatttccaccatacaggggtggcatcgtgtactgggccgattccatcggcgcaaagcgcattcacgcaaggctatcagagtgggagatgaagcatggccagttgttcaggccttgctcatacctgtcagaaagggcagcagaaggtgttcctctgagctccaccgcgaagaacaatgccaaggcccggatgtga</cdnaseq>

Protein Sequence

<aaseq>MAEKGRTEMEVRPGGVALITISNPPVNALSIHVLYSLKDHYEEA LRRNDVKAIVVTGKGGVFSGGLDINTFGAIQRNKAEQLKVDYVSIDVMTNTLEAAGKP SVAAINGPALGGGLEISMVCQARISIPTAQLGLPELQLGVIPAFGGTQRLPRLVGLTK ALEMMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHTLSRTDK LESPDEAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAFQDLV FSDTCKSLVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLSNY PVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDL VIEEIVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFS PAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIAL LLVDRGMDVYKIDQVCTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLI PLMFEDKRTGEASQKGFYKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKE IVEMVFFPVINEACQVLSEGIANKASDLDIASIFGMGFPPYRGGIVYWADSIGAKRIH ARLSEWEMKHGQLFRPCSYLSERAAEGVPLSSTAKNNAKARM</aaseq>

Gene Sequence

<dnaseqindica>7688..7726#7422..7560#7089..7237#6521..6642#6277..6398#5661..5915#5427..5586#5205..5330#4927..5101#4692..4778#4248..4550#4100..4155#3800..3881#3655..3722#2859..2915#2703..2768#2502..2573#235..331#agagcagtgcgcacgagttcctcctgctggagctggacgaacgaggcatggcagccatggatggattaatccccaactccaaactaacccccaccatgttttccgcctgatcaagatcaatcccctccatgcaacaacccatcaccattgatgctcactatttagcgagagccgagagagagaggagcagcagcagcagccacgccaagatccgggtgcggagggagggagaggatggcggagaaggggaggacggagatggaggtccggcccggcggcgtcgccctcatcaccatctccaaccctcccgtcaatgccctctccatccacggtcatctctctctctctctctctctctttcctcttctccgctgcagtttgtggctggatgaatttggttcttcagtgttagggacttgctgcaattatcgcttctacgtctacgttttatactgttatagctaaaaaaatttgttttcttatcctttctcgaagagttggcaggagctctgccttgacatcgataagtttctttttcagaaaaaaaaaacaaaaaacagaacaagccaatagtgctgttatacattcagcaagaactagcgggaaatttaactatttgccacttttaggtttggcaattaaccaaatacccttcttagatttgcacttaagaatttgccattggagagagaagcttttgtaatttttttgccactttctgcactgttcagtgccacatatacatgccagcatggaccaggcacacgaaatgactaatctacccttgttagtaatgtctgtaatataagctgagtcagaaataatatttggacaaattgatttcgcgaatcagttgcatcggtatggatgctgttcacttttatgaggtactatattaaagaccgagtacctccacatcagttaacaaatcaatatttgaagtaatagatccactgagatggttataacaaactttcaaaacgatacttagattgagttcttttgttcactttcacaactcatctctctcgtttttcacgtgtacgtttttcaagctgctaaacggtattccaatttggctggtattgttgggatggtgccacttggagtgagctcgattaaggtgtgcgatagcatggtttggaaatatttctctcttcacgtaaaactgagcaaagaattagcgcatgactaatttagtttgagttttaataaataaagaatagattaatatatatttttaaagtaacttaattttatttaaaaagttattaaagaaacgtgcgaaaaaaaatgagggagtagaactcagaccggcagaggccctggttccggttttttccagtccaaccgccggtctggtcaatcctaataactgtgagtagaagttagaaaaaagacatccgaatgcagcctcaaaaggttaatgaactgactgtaacatgaatggtgccattgatgttgttgccttataaatttaaaagggtaaaatgggaagattgggcaggttgctggtttctcttggtatctttccagtgaatgaattatgactaagattcaatgcggacaggcttagcaactgagaaacttaccactagctagaaggggtaggttggtcatttttcacgttggtccatgttggcatgcacatgtggcactccacagggcaaaaagtggcaaaaagttacaaaagcttctctctctaatgacaaattcttaagtacaatcttaagaagggtatttggttaattgtcaaatgtaaaagtggcaaatagttaaattccccagaactagcacaactattatctatatagagtaaatttcactttggaccacatttattagccaaagtttcatatattaacttcagaggcttatcctcagctgtgatttcactctaaaagaaactatcatgaaataaactgcttgatacgaaaaagaaaagcaacatcggcattgtagtgcgttctagatttttatccaagactagtaccatttgatgatgccatgtgaatcgctagaaattaacatgtcaaagtgtatggctattggatcttgtcaaacacctgctgaaacatccttccattccgttcccttaaatattctaacaagcgtatgtatgatgtgataccatcaaaactctcgatgtgcttttgggtgtcttctgaggcagtagactacctgttgtcccatcatagtgcacaaagctatgggaactagtccaatctgctaccttgttccaaatttagctaaagattttctttgaagaactacagtttaagttaaatattcagtaaatcatcggatgatctgtgtcaccgtgtgtggcgcaagttgcggaaatgccaatggtaaccaccagcacgcaaccaccgagtatttttgcctaattttttgaacaaaaccaaggtatcaaacatgcgcaagacctaggattttctacagcatgtctatatgcaaagttcttttttctaaggtttttcccgtggtgcatttttcagtcttgtatagcttgaaggaccactatgaagaagcacttaggaggaatgatgttaaagctattgttgtcacaggtaaaagccagtttaagaaatgcttacctcttgttgttagcacatgacagcaatgaagacactttcccagtttcctctcatccagatttttgcagtttcgtttattcactgtggaaatattttctacaggaaaaggaggagtattttccgggggactagacattaatacatttggtgctattcagagaaacaaaggtatggtagccctattcagtaactttttttcctatgattatttcacttacaactctaataactaacattgtcatgttttgtttctaatagcggagcagctaaaggttgattatgtgtccatagatgtcatgactaatactcttgaaggtacttgagtaattcaccttctcttctcgattttcttgaaaaatacacaagagagttccgtttgacctgattaatagaaataaacagcagcttctccatcgcatcacaaaacaaactttacatgaacaaccaaggataacttgagcaaccaaggatagtttagatgctggcattctgtccttgatcaacctatcgatcttctctgtatgccttccagaattatatccatgctttcagacctgtgttgagtatcaatcaagttggcactgttgaaagccttttgtgttctgaatcaaccagcatgtcaaggtgacaattaagtttagtttaacccttcccttcttgcttgcctgatctctgctgaacttgctgtccactagtctgtcagtcaaacagaccccttgctgcagattgatttctgattgcccaatgctgaggatggcccgcgaacacaccttgagtagatgatccttcctccttgaaaccataaggggaattttgctgggtgtggcaagcctcttttgtgaagatgattagcactccaacattgtttcaacttagacaaccaaatgatgctgacctgcgacctctgttctaactgaacttgccgtaggtcccatagatccaagtaccccaataagacatgcacatataaatttacacttatcagcattctctctcaaattcggtgagcctactcattgcataacattctctttcatggttgttactttatcagctgctggaaagccatcagtagctgctatcaacggtcctgctcttggtggagggttagaaatttccatggtatagataagacctgcttaccttatttttatctttaaatttctgaattgaagtattaactggatttattcgtgtaggtatgtcaagcacgcatttcgattccaacggctcaattaggtcttccagagcttcaacttggagtgatccctgcatttggaggtagtattttttttacttattttttaaaaatgggtcaagtcatgtgcatttttatgtcctagtgatccaattattttccctgataacattgatgcagtgcagcagtgatcaaactccatttcttattgatgtatgaagctgattgataacaaacttcaaactatgatatatatcattaacctatattttaatttattttccttggtcctgcattttaggaacacaacgacttccccgccttgttggactaacaaaagcacttgaaatgatgctggtagatttcacccaaatccttttctttttgttcttatggtgccattgcacattttctacttattaacagtgaaataaaacccatttcatcagatgtccaagcctattaaagccgaagaggcccatcagctggccctcatcgatgccatagtttcacctaatgatttgctgaatactgcctgccgttgggccttggatatatccgaatctagaaggccatgggtccataccctcagtagaactgacaagctagagtctcctgatgaggccagggagatcctcaagtttgccagagctcaggttcagaagcaggctgccaatcttcggcacccacttgtctgtattgatgttatcgaggaaggtatagtttcaggaccccaagctgggctacggaaggtacatgatgctacatttagcttaatgcctgttctgtggcttgacagaaataatgaaaagttaactgtgaaaatttaaaattcacttgagctgtttttttttttgactgattcacttgagctgttcacggcataaatgcaggaagccattgctttccaggaccttgttttctcagatacatgtaaaagcttggttcatgtctttttttcacagcgtgcgacatcaaaggtaatgaacaaggaaagatcactatcttttttaaaaaaaaaaaagaaaagaagatattttctcaaaaagtaaatatgagacatctgcttaccttgtagcaatcttttattatagctggacaaagccagtcttataacaattgcaacaggttcctgggatcacagacttaggtttaatgcctaggaaggtatctaaagttgccattgttgggggtgggcttatgggttctgggattgcaactgcactgatgctgagtaattatcctgttgtactcaaagaagtaaacgacaaattcttggacgcaggaattgacaggatcaaaggtacaccatatgctacacttgttgacatcatagcaatattttgttgataccagaccaatctgaaaaaggaacaaaatatttcactatattctttttctatcagcaaatttgcagagtcgtgtgaggaatgggaaaatgaccaaggagatatacgaaaaaacgctctcacttcttacaggtgtcgttgattacgagagattcaaggacgtagatttagttattgaggaaagtaacacatctaactgctatctagctatatatttcatagagcaatattggatggtatccaattattcatatgtttatttctcatcatgacaggcagttgtagagaatgtgaaggtgaagcagcaagtgtttgctgacttggagcggtactgtccttcccattgtgtacttgccactaacacttctaccattgatcttgacctgattggagagaagacaaactcccaagatcgcattgccggtgcgcacttttttaggtaaggtggtgttaatcagattcatgcataacccttttttgtgagctagttaacacaatccaatttctccacagtccagctcatgtgatgccacttctggaaatagtccgctccaatcatacctcaccacaagtagttgttgatttgctggatgtggggaagaagatcaagaagacaccagtagtggttgggaattgtaccggctttgcggttaaccggatgttctctccctatactagtatagcgctcttgcttgttgatcgtggaatggatgtttacaagattgatcaagtttgtaccgaatttgggatgccaatgggtccattcaggtcagcctatagacaatggagctctcccttcctcctttgacttcatatagccaggacatatacagtggaaatggcctaagtgttgaaaaaataaacaaatgttgctaaagttggttggatttgttggaaacggttttgagaaatgttgcacagctgaatgcaatgggtcaacctttttgtttcttgttgcgacaattgtggatatgtgccttgaaacatgtccacactgctggcaaaaaaatataattcatgttttcacattgcaatggaatgcttagtactgaaaattgctaaaaaaatccatgtgggttatacttggaattgaatcagacttcaattgcccttttaatactttctccagattgctagacctggttgggtttggagtagctcttgcctctggcatgcagtaccttgagaactcccccgggagtgtcgacaagtcaatgctaattcctctcatgtttgaagacaaaaggacaggtaaaataattcaaatattacctacagtatttcttttcttcccttgaggttttctttgctgatctttgaagattgctagtattcctgaaatcccatttactgtccacttaccttttacgcaggcgaagcctctcaaaagggattttacaagtatgagggtaatcggaaggccatccctgatcctgatatcttcaagtatgttgagaagtcaaggagaatggctggaactgtgcctgatcttgaggtttgttttcaccttccaaagttccaacaccccttttttctctgttcataaatattcttgtttaccctgttcagagcttaatggtaataaaaatatataattggaatatatatttccgtaaaataagtatacttgagtgtggtataatgggcattgaaggtcaaagaatcaactcacctatagttgtacattatccacactgaaacagcaacgttgttcatagatacatatcagtgtgatcaaataaagcaagccagttctcaacttaacattcagtgtttggtgaaatcctgacaacaaattaatcgtccactttagtgcatacattgaaacttgcatgtatcttgatatagatcataattagtcaaaagttcttatgttaccataatcctagatcatatccctgtgatctctatttagttctatttgtgcaaatgatgtaccagctactgaagcttgacgacaaggaaatagtggagatggtgttcttccctgttatcaacgaggcctgccaggtcctcagtgagggcattgccaacaaagcctcggacctcgacatcgcctcaatcttcggcatgggatttccaccatacaggtgcttcctctcactctgaaaaatgcaaatacgcttcaatttatctgacaacgactgaactctgaacagtatgtataaattgcctgataacaacagctgaactctgaacaatattgtatgcttctgacaacaacagctgaactttgagaattctgacaaactgctcaactgattgtgcaaccaggggtggcatcgtgtactgggccgattccatcggcgcaaagcgcattcacgcaaggctatcagagtgggagatgaagcatggccagttgttcaggccttgctcatacctgtcagaaagggcagcagaaggtgttcctctggtgagaaagagtgacttctttgcttatcccattttcgttcttcggacatcaacaaatcaattctgcaaagtttcgcacatgttttccgaatgcttttgttctgaaaaagaatgaatttgatttgcagagctccaccgcgaagaacaatgccaaggcccggatgtgagtctgatcttactgccatcatgtgttttccagccgagattgatgaagaacagtaataatgcagcctcagtcagagtttcagacttcactggctgctgtgaagtgtggagcaaagagagtcaggagattgaataacagtatacagtgtgtattatctaaaaaataacagtatatagtgtgtatagtgagaaaccgtacgaaatgtgtatgaaaagagagaccaatttacgcacagaattcatatatgaatgttaaaaaaattcagatcactggacgtgatgacatactacatgcagctcggattcttatacggctgcttaaaaggcctcattgattggtgtatagatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0155000, RefSeq:Os05g0155000