Os03g0803000

From RiceWiki
Revision as of 19:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0803000

Description

Longin domain containing protein

Version

NM_001058141.1 GI:115456010 GeneID:4334472

Length

3219 bp

Definition

Oryza sativa Japonica Group Os03g0803000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34357829..34361047

Sequence Coding Region

34358024..34358213,34359252..34359393,34359474..34359594,34359699..34359761,34360633..34360779

Expression

GEO Profiles:Os03g0803000

Genome Context

<gbrowseImage1> name=NC_008396:34357829..34361047 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34357829..34361047 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcagcagtcgctgatctacgcgttcgtggcccgcggcacggtcatcctggccgagtacacggagttcaccggcaacttcaccaccatcgcctcccagtgcctcatgaagctcccggcgagcaacaacaagttcacctacaactgcgacggccacacgttcaactacctcgtggaggacggcttcacatactgtgtcgtagctgttgaatcagtagggcggcagattcccattgcattcttggatagagttaaggatgatttcacaaaaagatatgctggtggaaaagctgctactgctgctgcgaacagcctcaaccgagattttggatcgaaacttaaagaacacatgcagtactgtgtggatcatcctgaagagattagcaagcttgcgaaagtgaaggcacaagtttcagaagtcaaaggagttatgatggaaaatattgagaaggttcttgatcgtggagagaaaattgaactgctcgttgacaagaccgagaatctgcgttcacaggcccaagatttcaggcaggcaggaacacaggtaaggagaaagatgtggctgcaaaacatgaagatcaagctgattgttcttggcataataattgcgctcatccttatcataatcctgtccgtgtgccatggattcaaatgcaagtag</cdnaseq>

Protein Sequence

<aaseq>MGQQSLIYAFVARGTVILAEYTEFTGNFTTIASQCLMKLPASNN KFTYNCDGHTFNYLVEDGFTYCVVAVESVGRQIPIAFLDRVKDDFTKRYAGGKAATAA ANSLNRDFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIE LLVDKTENLRSQAQDFRQAGTQVRRKMWLQNMKIKLIVLGIIIALILIIILSVCHGFK CK</aaseq>

Gene Sequence

<dnaseqindica>196..385#1424..1565#1646..1766#1871..1933#2805..2951#tttcttttcccatttccacccccatcatttcccctcccactacccaaagcgaaaccgacctttcccccttcttctcccctctcctacctcgccgagatctagccctagggttcgccaacttcaccggcggcgaggagcacgtcaccggcggcgagcacaggcggagggcgaggggagagagagagggaggaggacatggggcagcagtcgctgatctacgcgttcgtggcccgcggcacggtcatcctggccgagtacacggagttcaccggcaacttcaccaccatcgcctcccagtgcctcatgaagctcccggcgagcaacaacaagttcacctacaactgcgacggccacacgttcaactacctcgtggaggacggcttcagtgagttcccttcccctctcgcccatcccccgtccgatcctttttgcttcctcccgatcgattccccgcggagtgcatctgatctgcgtggatctgataccgcgcgtgctcgatttgggatggtgggtgtagatctcgctgatttgttggagacgcggttaggtcgttttcgttttggttagcatcggcgatcgggatgttggttgagatcgtgatgcgctgtggagttcgtgcgagaagtttggtcatcgcacttgttggttagattagatgcagatgttggttgggattaggacctttcaatagttccgccgtatcgaagtggatatgattatccattgtttttttcacctttatccggttttttagtccctggactgactgtatgcataggagagctatggtgtaagagcttggattttaggtctgccccgattattcgcaaagccgtaagccagtgccttagagtatttagtcaatggcgagccctctagatatgcatgctatttttagtagacagctgtttgtgagctttgcatgctgctcctgtcaagtttcagctcatatttatgcatgcagatagcgcgttgaatgaaatcggctgctaccttgttattctattatgcacgcaatttatagtttagtttcagtgctgaaatgtcttattataatttctttggtcagaataagacctggagttgccatggtgattaatgctagaaattccacgatttggtgatgactaaaagtagtaatatgttagttatgaggtatcatgttgccaactatcaatgattatagtgcttgaaaaactttccaataaggagcagggaaaatttattaagtagctgatttttatacccatatgatcttagctttgcaaatttggcacagttaccacatttctaaaatttggcacacgtgcttgtatcttctgttaacatctcatatgagagcacccgttttacgatttactttaaccatttatcacttgaaagcctgtgacgttgattttctaataccacacttcttctgcagcatactgtgtcgtagctgttgaatcagtagggcggcagattcccattgcattcttggatagagttaaggatgatttcacaaaaagatatgctggtggaaaagctgctactgctgctgcgaacagcctcaaccgagattttgggtacgtattgttgccagggatagagtcgataaagttatggtggtcccttcgactaatacttctctatttactatttgtagatcgaaacttaaagaacacatgcagtactgtgtggatcatcctgaagagattagcaagcttgcgaaagtgaaggcacaagtttcagaagtcaaaggagttatgatggaaaatattgagaaggtatttgttttctttgtgtttgtgtattcgttctacagtttttatgctcagaacattgaggatttcctttgaagaatgcttctgatcttgctttctctttgcaggttcttgatcgtggagagaaaattgaactgctcgttgacaagaccgagaatctgcgttcacaggtcctgacatgttccttcagcctgcactgtacctgttattgcacttcaagtttcttttggagcttttattgttagtgctactcaatactgtcttttagagagtagagacccacttatgcagttggttttccttactagatgccaaatatttctaaataccgctaaaatgacacaattaagtggatgcaaatttacgttgggtgtgtgcttcatttttgactagtcactagcaccctggtggtaactagtggggtagattactcttgttattgttgaatgtgtaaaaacacaagtcatggtattagggatgcatagttctattggtaaaacacaagtcaaggtattaggtgttccagtgttcaccgaggtgctaacttgatggcagactggctgcctttggttattattaggtggtgtctaggtgctacttttttcactttaaacgtggtgatttgttcaaattattatttcttgccactaaaaattggtcatgaattagtatcagtttttactgagaggtgtttacgatcatttctgaaagagttcttgagcttgtgaaaggaatggaacaaacttgaatattgatgcataattattgatagtttatggagtggtgttccacgtcggatattgaagtttttggcttttgtgccatctgggctaaatttatgtgtatcttaacagtcttgtattagttctggctaacctgaatgttgctaagtttggggctctaagaaagattaacttgatgttgtaatttactaagcatgagccggaatttccgtaacaaaagattttatgaaattatgctgcaattctgtatgtctgaaataacaatatatctaagctttttgcttctgggcatatgcaggcccaagatttcaggcaggcaggaacacaggtaaggagaaagatgtggctgcaaaacatgaagatcaagctgattgttcttggcataataattgcgctcatccttatcataatcctgtccgtgtgccatggattcaaatgcaagtaggcataaattgactcattcaactgcacttacagtactgcttgcttggggcaaaaagggggggaaattggagaggtgtttggttctttctagtttgtgctctggctggttacggcgcctgagtgtttacgctgtcgtgtctgttgaatgctggttggtgactcggtcagtgggttgtgggttgaagtgtcgtgtatttttggatgctatgtgtgtatagcttggattttaacctccttgttctattattattattatatgatgattagat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0803000, RefSeq:Os03g0803000