Os05g0155700

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0155700| Description = Conserved hypothetical protein| Version = NM_001061228.1 GI:115462186 GeneID:4337855| Length = 5252 bp| Definition ...")
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Gene Name

Os05g0155700

Description

Conserved hypothetical protein

Version

NM_001061228.1 GI:115462186 GeneID:4337855

Length

5252 bp

Definition

Oryza sativa Japonica Group Os05g0155700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3235618..3240869

Sequence Coding Region

3235631..3235831,3235933..3236070,3236905..3236986,3237100..3237176,3237271..3237377
,3237809..3237947,3239044..3239160,3239292..3239383,3239538..3239604
,3239719..3239797,3239897..3239988,3240193..3240336,3240537..3240677

Expression

GEO Profiles:Os05g0155700

Genome Context

<gbrowseImage1> name=NC_008398:3235618..3240869 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3235618..3240869 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgccgtcgtcgccatcgccggcgacggggacgccgacgccggccaccgccgtcctctcctcgcctccgccgacgacgacgacgagatccgcccctaccccgcatcatccccttcgccgcagcacccggcgggggctgagcggaagccgcggcgggtcgcctcgctcgacgtgttccgcggcctcaccgtcgccatgatgatactggtggacgacgccggcggggcgtggccggggatgaaccactcgccgtggctcggggtgacggtggccgacttcgtcatgcccgccttcctcttcatcatcggcgtctccgccgccctcgtcttcaagaaaacaccaaacaaaacagtggcaactaagaaggctgcaatcagggccatcaaacttttcatcttgggtgtaattttgcaaggaggatatattcatggcagacacaatttaacttatggcattgatttggatcatattcgatggctaggtgtgctgcagaggatagctattggatactttctagcggcaatttcagagatttggcttgtcaacaatatttcagtggattcagctatatcatttgtgaagaaatacttcatggagtggatcgtggccgtaatgatttcagcactttatgttggcttgctactcggcctttatgtttcaaattgggaatttaaagttcaaactagcaattcaatccttacaattccaactccgggcaacgaaattggaatgaaaatgatccagtgtggagttagaggtagtcttgggccaccttgcaatgcagttggatttgtagatcgagttttacttggtgaaaatcacctgtacaagaacccagtctataaaaggactaaggaatgcagtgttaactctcctgattatggaccacttcctccaaatgcaccagactggtgcctggctccatttgatcccgagggtttgctaagtacattgatggctgcagtgacttgctttgttggattgcattttggacatgttttggttcattgcaaggatcattcacctcgaatgctattatggctactagcttccactgtgttaacagtctcaggatttctacttcagttattaggcatgcctttcagcaagcctttgtacacggtgagctacatgctactaaccggtggggtatctggattcctgctgttgttgctatactacattgttgatgtcatcaatatcaagaagccgttcatcctattccagtggatgggcatgaacgcgcttatagtgtatgttcttgctgcttgtgagatcttccctacacttgtgcaagggttctattggagatcacctgaaaacaacctggtggatttgactgaatctctgcttcagacaatcttccactccaaacgctggggaaccttggcgttcgtcgtcttggagatcatcttctggtgcctggctgcttgtttcctccacatgaaaggcatatacttgaaactgtag</cdnaseq>

Protein Sequence

<aaseq>MDAAVVAIAGDGDADAGHRRPLLASADDDDEIRPYPASSPSPQH PAGAERKPRRVASLDVFRGLTVAMMILVDDAGGAWPGMNHSPWLGVTVADFVMPAFLF IIGVSAALVFKKTPNKTVATKKAAIRAIKLFILGVILQGGYIHGRHNLTYGIDLDHIR WLGVLQRIAIGYFLAAISEIWLVNNISVDSAISFVKKYFMEWIVAVMISALYVGLLLG LYVSNWEFKVQTSNSILTIPTPGNEIGMKMIQCGVRGSLGPPCNAVGFVDRVLLGENH LYKNPVYKRTKECSVNSPDYGPLPPNAPDWCLAPFDPEGLLSTLMAAVTCFVGLHFGH VLVHCKDHSPRMLLWLLASTVLTVSGFLLQLLGMPFSKPLYTVSYMLLTGGVSGFLLL LLYYIVDVINIKKPFILFQWMGMNALIVYVLAACEIFPTLVQGFYWRSPENNLVDLTE SLLQTIFHSKRWGTLAFVVLEIIFWCLAACFLHMKGIYLKL</aaseq>

Gene Sequence

<dnaseqindica>14..214#316..453#1288..1369#1483..1559#1654..1760#2192..2330#3427..3543#3675..3766#3921..3987#4102..4180#4280..4371#4576..4719#4920..5060#aaacgacccaaaaatggacgccgccgtcgtcgccatcgccggcgacggggacgccgacgccggccaccgccgtcctctcctcgcctccgccgacgacgacgacgagatccgcccctaccccgcatcatccccttcgccgcagcacccggcgggggctgagcggaagccgcggcgggtcgcctcgctcgacgtgttccgcggcctcaccgtcgccgtgagcctccttcctcgaccggatttctcccgacggcgtggtcggggatcctctcattctcgtggtgactgggggtttggtttttttggttgggggcgcagatgatgatactggtggacgacgccggcggggcgtggccggggatgaaccactcgccgtggctcggggtgacggtggccgacttcgtcatgcccgccttcctcttcatcatcggcgtctccgccgccctcgtcttcaaggtatacacccccaaccctagtgccctctcctgcttacctgacgcccaaacccgaattctgctacttcaagaaaaagctttgatatgtagtactccatccgtttcagattataagtcgtcttgactttgctacaggtttgatcaagtttgtagaaaaaagtaataacattttcaacccaaaacaaatatattatgaaaatatattcaactattgatttaatgaaactaatttggtgttgtaaatattactatatttgttttcaaactcagttaaaattggagtagtttgactttgaccaaagtcaaagcgacttataatctgaaacatagggagtatcaagcaaatcaaaggaactttgatgtgcctgtgacttgtaaaaattggcccgtgtgtgttgaacctaggtaattttggtttggggaatttgttgagataccctattgctgactaagtttcagaggatttgtgaatactcagttgttaagccaatgaggtaatgagcatatctgctgtgcaaatcttctgaaactttgtgagaatataataggctacctgattgcaatgccaaaaaaattctgcaaacctttatgccacaatctttttatcctggttaccttttctactttaaatctggtatacctttttttgtttccaacttctgttccaatctgccaagtgatgtaagcatataacaaaatttaatgcctatgtcattgtgctccatcacttggaatgtgtgtgattactcatgatgttggtgctcactgcgtgacttaaaccactggctgcttagttatagaataacatctgactattgtggatgatgcacaacagaaaacaccaaacaaaacagtggcaactaagaaggctgcaatcagggccatcaaacttttcatcttgggtgtaattttgcaaggttatacttatccctgtgtttccttgccaactataccagcaacatttagctccatattttgccatttcttttggtcggagtttttcctttttaaaattatatcttacctgtaggaggatatattcatggcagacacaatttaacttatggcattgatttggatcatattcgatggctaggtgtgctgcaggtagtgtttaaaaacaaaaggagaagctttatcacatttcctcttcggcttactgaatgttcgaaacgttaacttgttgttatacttctggtagaggatagctattggatactttctagcggcaatttcagagatttggcttgtcaacaatatttcagtggattcagctatatcatttgtgaagaaatacttcatggagtggttagttaataagtgtaacaatttactatggaaagtttcagtttttgttcagcatttggaattatgtaatccaatcattgtttatacatgctgattacattctatgttcatgtaaagtggtatttgctctacaaacgttccatgatatgaaataacatgtttagttgtccatctaaagaatgttatctgcattagttgattaatagtcctgaatttgggggagttttggtaattctggtcattttgattgctcgatctgttcatctgctagagggttaggtaacttttttctgtacagttaaaaaaattgcaatatttgtagtttggctgtgcttcatatgagattataactgagaattattctgaactcaagacatggaagatatactaatatggccataccatttctgacatttgtttatcgtttgaaggatcgtggccgtaatgatttcagcactttatgttggcttgctactcggcctttatgtttcaaattgggaatttaaagttcaaactagcaattcaatccttacaattccaactccgggcaacgaaattggaatgaaaatggtaagaagagaatatcctgtttaatctaaacactttattctatttggatggtatcctgtgtgctcaagaatcggattgctagatgtaccatttgtttgcttttcatgtgattttgtttcaatacttgaagcacatcatgattctgtatctgtagtgatatatttggttggatgaaacctactcaagttgctggaatgcaatatttcaatcatgtctaactgagctttattcagtaaatatactttgaccccatttatgctgactattttccttttgacaaaaatgttttgattgggtgacagacccttttcgtatttacacagttatatttttcaaaactagttgatatgtttggtgacattttaagatacatgaattcacggccatcatatttgtcccattgtttcgttctcagatgcttatccagaattgatttaccaggaataacccaagtcttgataaaaaaaatactggatcaggccagtactgcttcctggcaaagactggggaaaagaattcctgaacggttgctaactaaaactcaacttcaaccgaattttaattgaagaaggttcctagttggttaccctggattcaggaattcaaaattgaattgaatttagtatgtatattaagaaaatatcagattttgtaaatcctgattcgtacagtacttctagaaccagaactccagaagttactggtggatatgaaaccttatgttcagatcagataagtcagcttatccagtgttgagagctaggtgtcgtggagtttttacttgtgggttcctttacagcattttgtggtcctaatcaccatatctaccttgttgcagttactaacctaagaaaatatcggattttgtatatccttattcataaagtatttctggaaccaaaactccataagttactggtggatatgaaacctaggttgaataactggtcaattcatccagtgtttgaaagctaattgctgtggagtctttacctgtggctgtgggttcctttacagctttttgtggtcctaatcatcatatctacatcgttgcagttactaacctgttttgctggttttgtttttggtgtttcagatccagtgtggagttagaggtagtcttgggccaccttgcaatgcagttggatttgtagatcgagttttacttggtgaaaatcacctgtacaagaacccagtctataaaaggactaaggtctttttttccttaagcaaacacatgatattgatcttttcccgattcacttggatatcaaatagccatgttcttataggataccaatttgaaaaatatgcaagattaaattccttttatttgctccataggaatgcagtgttaactctcctgattatggaccacttcctccaaatgcaccagactggtgcctggctccatttgatcccgagggtttgctaaggtggttatttatatcttttatttttattatttggttcttaaaataattgtacaaccgattcaatcctcaattgacctgaccaatgtttatcaattgaaccttcccatttcctgtaggcaaaccagaaaataacctcccttattggtttttacagtacattgatggctgcagtgacttgctttgttggattgcattttggacatgttttggttcattgcaaggtagtgcccatgaactgcatacctcccttttagaatctcttgaaccttgagcaaaatggaatttaaaaacacaatgatatttccagacttctctaacctttgcttctaccacaggatcattcacctcgaatgctattatggctactagcttccactgtgttaacagtctcaggatttctacttcagttattaggtaattatgtgtttcgtgagactgctggcattcagcaatttgttgttttaatcagagcttccattcctcaatctgattcatgcatgttttggtcattaggcatgcctttcagcaagcctttgtacacggtgagctacatgctactaaccggtggggtatctggattcctgctgttgttgctatactacattgtaagtttgagtgctcgaacaatctctggaaaccgtactgtgggatagtatggtatcactatatatgtaatcttaatgacggttgatgtacccatgttagtttgtggaagctttaccttttctgttcgaacaaactgttatgaaggcagataatattacctcattagtggattctgattcacagagcctctttttgtcatgcaggttgatgtcatcaatatcaagaagccgttcatcctattccagtggatgggcatgaacgcgcttatagtgtatgttcttgctgcttgtgagatcttccctacacttgtgcaagggttctattggagatcacctgaaaacaacctggtaagcaacttgctgtgctgtgcatcctaccatatatggggtggattctttcatagatgcaatatttactcaagaataccaaattcctcttttcctggagcaataaccttacatgttagctaacagaaaatgatcttgcaaagctctactacctctagagacttgattcatagcgcggaaaattctcctttttatttcaggtggatttgactgaatctctgcttcagacaatcttccactccaaacgctggggaaccttggcgttcgtcgtcttggagatcatcttctggtgcctggctgcttgtttcctccacatgaaaggcatatacttgaaactgtagctgtagagccattcatttccctgcaaaaacacattttctgcagaaaatgttcttttttggcccaagcaagggccttccttgtaaatcttctgaaacaattctctgtaaatgcacttcctccatttgtacactgcaactgaattgatcgccctgatgtatcattttgtaaattcaatgcgtggatttaattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0155700, RefSeq:Os05g0155700