Os09g0531100

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0531100| Description = Conserved hypothetical protein| Version = NM_001070288.1 GI:115480318 GeneID:4347667| Length = 3760 bp| Definition ...")
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Gene Name

Os09g0531100

Description

Conserved hypothetical protein

Version

NM_001070288.1 GI:115480318 GeneID:4347667

Length

3760 bp

Definition

Oryza sativa Japonica Group Os09g0531100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21630803..21634562

Sequence Coding Region

21631296..21631397,21631526..21631647,21631729..21631776,21631867..21631969,21632073..21632147
,21632397..21632513,21632626..21632691,21632802..21632900,21633562..21633667
,21634231..21634310,21634407..21634478

Expression

GEO Profiles:Os09g0531100

Genome Context

<gbrowseImage1> name=NC_008402:21630803..21634562 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21630803..21634562 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacggcggcggcggccgcggcgtccacctcgctccggccggcctcccagtccgcgctccgtctcgcgggttcgccgcggcggtggtgctggggagccccggcgctctcccctgcgaggagagcattccacgcggacacgcggaggcggaagactttgttatatgcaactgataaaggcccagaagaatccttgaagaagacaattgaagttgacaggttgatcgagatgctgagggatgcaaatcctagagagcttgatcaaatagtggttgaaaatgttctggcgttcgatgagggtttctgggttcggctggcagcaagaattgatctatgcaaatcggatgatgataaaaaagactatgaagaattggctgaaaatgtcatgaacatagttgaccgtcttgtccataagactgatgaaaagattgaacagtcaactgatgtgctgaaggcaattattagtcctgtgatgcacgaaggtgaaaacgccacgtggccaccgagagatccggaggctctcaaattgatggagaaagaaatttcaaatagagaaaaagaaggacagctagacgaaggatttctgtcagaggttaatgctcagttgaggcaggctaaacaagatggagataaaccaggacttcaagctatgctgcagaaggtgttgcagctgtatgcgtccaattttctccaaaagcgtagttacgcttacaaagggggagaagtaatagtgcctgaaagttttcttgaatctgtaataaaggctccggaaaacgagtggaacaagctgttgcttgatgggttaacagtggggaaaggaaatgtttcaccagaagaattttatgctgttataaagaagagaattgagagagtcttaattcgcacagaaggaggttcttatcagcagcgcatactcgttgaatatctaaaagagatacaggctagagcggaggaagttgtgaaggtgcttcaaggaccaaccatatga</cdnaseq>

Protein Sequence

<aaseq>MSTAAAAAASTSLRPASQSALRLAGSPRRWCWGAPALSPARRAF HADTRRRKTLLYATDKGPEESLKKTIEVDRLIEMLRDANPRELDQIVVENVLAFDEGF WVRLAARIDLCKSDDDKKDYEELAENVMNIVDRLVHKTDEKIEQSTDVLKAIISPVMH EGENATWPPRDPEALKLMEKEISNREKEGQLDEGFLSEVNAQLRQAKQDGDKPGLQAM LQKVLQLYASNFLQKRSYAYKGGEVIVPESFLESVIKAPENEWNKLLLDGLTVGKGNV SPEEFYAVIKKRIERVLIRTEGGSYQQRILVEYLKEIQARAEEVVKVLQGPTI</aaseq>

Gene Sequence

<dnaseqindica>3166..3267#2916..3037#2787..2834#2594..2696#2416..2490#2050..2166#1872..1937#1663..1761#896..1001#253..332#85..156#ggctcatcctctctctctccaaatctgtggacatttcacgcgcgctctccgctccagcctccagccaccgcccaccggccggcgatgtcgacggcggcggcggccgcggcgtccacctcgctccggccggcctcccagtccgcgctccgtctcgcggtttcgctccctcaccaccttcgtcgtctctgattctgtgtaatttatcatgcgccttcgtctaaccgagtagtcttccccggttaaatcgcgcagggttcgccgcggcggtggtgctggggagccccggcgctctcccctgcgaggagagcattccacgcggacacgcggaggcggttcgtgttctctccttgggcgtttgcttctagtatggaatggagttgatggccttttgtccgaattagttttgcttcctgtggtgtatttgggggaagtcatcgcagacctgtggattacccttcatgttgcattgttgtctcctgtgggattaagtgtttcatgagattggggtatttcgttgtagattactgttctatgcttttaaattgcaatgccggtaattttgttgctacgagttattgttcagagtagattacttctataactctcgctgttccattggagttgcttatacagtgcgctctctaactgccaccagcacagttcagatgttcttcagggtgttttagtaacatgagtttctacggtcctgatgcacatttctgattcatgtgcaaatctacatctaccattcattcctaggatttcatactatttggtagctgcaatgcggcaggatctgtgatttgcctttccgaattcattgtgatggtgcaaatagacagatgaacagtctattattattcttaatttaagaacctatgtttgtattaaacaggaagactttgttatatgcaactgataaaggcccagaagaatccttgaagaagacaattgaagttgacaggttgatcgagatgctgagggatgcaaatcctagagaggtaactcttcatatcttcaatctgactgtttattctactactctccatcccataatatagcaacgtagtgctggatgcccgtatccagatccatagtactagggtacgtcccatccggtcctaggttgctatattatgggacagaggaagtattagataaggttacagtctcaggttttacaccacactaaaagatctctccattcaattgtaccaatttaaatctgttaccaaacctctatagtatataattctccttgctttgagcatgcttccattagttcttggttcaaaatctgtagaaccaatctaagcagtacttgatgacttggtcgtgggagcattaagcctcaagttctgtgaacaacatgaactgttcaattttatttacttcggagttttcatatttacctttagtttcttatcaggtttattttacgcatttagaaatatttgaagtatgcttatccttgtcagtttatcactagattttattattatgtctatggtaattctaaatactggagcattgctgaacagaatatatgcagtttgttttattttcatttaattgaattaagccttgctttgttttgaaattacttttgacatgaaaattacttgatcaacttactaatttacccttccttgcatgtgacagcttgatcaaatagtggttgaaaatgttctggcgttcgatgagggtttctgggttcggctggcagcaagaattgatctatgcaaatcggatgatgataaagcatggttttcacaattggatttcttttttgttactatggaatgtcgatcccgttctcttagctcgattaatctaactttgtgaatggtgtctctcttctgccttttcagaaagactatgaagaattggctgaaaatgtcatgaacatagttgaccgtcttgtccataagactgatgtaagaacaatattgggtcacattatttgtattaatggcaacacttttggcatttttatcgtgatcagaaaagttccttgaatgctgctaatatttacccttatctattcaggaaaagattgaacagtcaactgatgtgctgaaggcaattattagtcctgtgatgcacgaaggtgaaaacgccacgtggccaccgagagatccggaggctctcaaattgatggagaaagtaagaacgaacatagctattttttcactgttattctttactgggatatttcatcggtgccttcctatgaatttggtttatttcacattacctcacacatagcatttagtcgctttaggcaagttactgttttggttggctctacttcacatgaaacagatttatattccaatctgtagtgtaactagaaagtgccagttttatactccaatcttgtatttgttttttatggtgtcctggtatcgccaggaaatttcaaatagagaaaaagaaggacagctagacgaaggatttctgtcagaggttaatgctcagttgaggcaggtatgtgtcattttctacattgtggattaactttgttgatatattactcagcatagagtagttttgctactcattttactattacacccttacatgtgtttaggctaaacaagatggagataaaccaggacttcaagctatgctgcagaaggtgttgcagctgtatgcgtccaattttctccaaaagcgtagttacgcttacaaaggtaaatcctgttcattcgttttggactgttgaaccacaaccactgagaatgattaccctttaaattgatttgtctatctttcattttcagggggagaagtaatagtgcctgaaagttttcttgaatctgtaataaagggtatgtatcattgtgcggagagattgtttgtcttcaatcaactgatctcaacctttaatatatccagattgtgccttgcagctccggaaaacgagtggaacaagctgttgcttgatgggttaacagtggggaaaggaaatgtttcaccagaagaattttatgctgttataaagaagagaattgagagagtcttaattcgcacagtaatatcccaacctttggagttatacagagaacgcaatctcttttagtttgtcaggaccttgtctttagtttagcatcccctcagcacatttttcatttttcctcttgttatctttttgtttgacaggaaggaggttcttatcagcagcgcatactcgttgaatatctaaaagagatacaggctagagcggaggaagttgtgaaggtgcttcaaggaccaaccatatgatgatgtctggtggtcgattttaaacagtgcaggttatccagttcgatcatggttttgacgcatcacctagcaaaagcttagaaggcgacaacagacaacctaactaggtatgttgttcttcgtttggtatgccgttgagaacactagattctattacttgtctgcacatttttacagcctctgcctctcagttgtctgattcaggaacccgagataagcatagcgagaagagaaacagatccaaatgtcctaaaggagtgcgtgattttcattccccactttggtcttcatctcgaatggccgattttgctgttggaatgtttgatttctgttctgtctgattgacacttgacacgagtgagcttgactaagctgtagtaacatgtgaatcggtttttgttgtgtaagggagaaggttcaatgctgagcttgacttgttactgaggtgcttgttgaactcattttaagttactgatccctgcaactgttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0531100, RefSeq:Os09g0531100