Os03g0833800
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os03g0833800 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001058347.1 GI:115456422 GeneID:4334689 |
| Length |
4274 bp |
| Definition |
Oryza sativa Japonica Group Os03g0833800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:35888087..35892360 |
| Sequence Coding Region |
35888720..35888737,35889592..35889909,35890182..35890302,35890394..35890568,35890665..35890735 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:35888087..35892360 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:35888087..35892360 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaggagatctgcatctctactccgagtccttttggttttcataaccatggttgggactcaatggtccaatgtatccagtacatactgcaaggacatggcatcaagcgtatatcgaccccacagtgtcacaataactgaatttggtgctgttggggatggtgtgactctcaataccaaagcattccagaacgcaatcttctacctcaattcatttgcagacaagggtggcgcacagctcttcgtgcctgcgggaaggtggctgacagggagttttagtcttatcagccatctcactttgtcactggataaggatgcagaaataattggatctccggattcatccgattggccagtcattgatcctcttccatcctatgggcgaggtagagagctccctggaaaaagacatcagagtctaatttttggaactaatctaacagatgtaataattactggcgctaatggtaccattgatggccagggagccatttggtgggattggttccacagcaacacactgaattatactaggccacatcttgttgagttgatgtactccaccgatgttgttatatccaatttaaccttcaagaactcaccgttttggaatatccatcctgtatactgcagccaagtgcttgtccagcatgtcacaatcctagcgcccctgaattcaccgaacactgatggcattgatccagattcgtccacaaatgtctgcattgatcattgttatgtcagaaatggagatgatgttattgtcataaaaagtgggtgggatgagtatggcatttcctttgctcgtcctagcacaaacatcagtatcagcaacatcacaggagagacaaggggtggtgcagggattgcctttggaagtgagatgtcaggtggcatatccgaagtccgggctgagggtctccgcatcgtcaactcaatgcacgggatcagaatcaagaccgctccagggcgtggagggtatgtgaagaacgtgtacatatctgatgtgagcatggacaatgtttcgatggccatcaggatcaccggaaactttggtgaacatcctgatgacaaatatgatagaaatgctctcccaatgataagcaatattacaatcgaaaatgtggtcggcgtcaatgttggtgtcgctggcatcttggaaggaattgagggggacaacttcagcagcatttgcctgtccaatgtttccctcagtgtacagtctatgcatccctggaattgttcgcttatcgaaggttattcaaactctgtgatcccagagtcatgtgagcaactcagaacagattgtggacagacaccaatttgctatgatggtggaagttcttcagcaatacatgcacaggcagccagacatagattgtcgagtgccagcagattgctaaatcctttactgaagttggcgatgctgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MRRSASLLRVLLVFITMVGTQWSNVSSTYCKDMASSVYRPHSVT ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSL DKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDG QGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISI SNITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYIS DVSMDNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGD NFSSICLSNVSLSVQSMHPWNCSLIEGYSNSVIPESCEQLRTDCGQTPICYDGGSSSA IHAQAARHRLSSASRLLNPLLKLAML</aaseq> |
| Gene Sequence |
<dnaseqindica>634..651#1506..1823#2096..2216#2308..2482#2579..2649#3225..3952#agcttggctcgcctctgctccgcttcgcctttgctccgacccggtcggcctcgccgccgtcgccgccgccaccgcatcacgcgcgcgcgcgcgcgacggcgcgagcgcacgggtgaggtgagagaggggtagtagagcagcagccgcccccgaccgcccacgcccgggccgggtggtggagcacaccgtggcatgattgggtccatggcctcctgaccccgcctccctctcctcctcctctgctccccttttgctgctgttgctgcttcctactctcactctgcttctgctgctcaatccacctgctcctctccttctcttctctctcccgagcggccgagaagaggcgaggggagaagggaggacttgattcttgcttgttgctgatccattctttcttgctctgctctgctcttgtgtggtgtggtgagcaatctgtgctggctcttctcctttcctgctctgctgattcttcgtttctttcttttctttttctttttttctgacgagcttggctggtagctgttcttgcagtgtgtccaggcttgccgcattaaaggagaggtggtttttgttgaccctgtttagcagcagcagcagcagcagcgaccaagatccgtctcgtcggggaagatgaggagatctgcatctgtatgcttccaatccctctttagctttgggataatgaggttgtgctctgctgacactgtagctttcttgatctctctgggggagatggatgccggtttggagggtggtagcagggttttggtgggatccaatcatccaagcacacacattgcagtttctgttccttccttctttagtgagtgagtagtggattggggattggggctggtgatctagctacaggctattacaacacaccattttgggggcttcttctgcggtggcatgggcactggatagattggtgttggtgctatgatgattttgtttggcattgggtagcattggcgcgtgtttgatctgttttgtgctaaggttgtgttgagcactggcattgggaggaactagaggccagatgttcatgctgcttgcgtttttcctgccacttgattgaaatgttcttttgggatcataatatcatgtgcttggctgaacagtgaacacttttgttgagactcgtcatgattagttgcgtttctttgatccaaaaaattgtttttccatgtagcaacttcagaggatacatggacacattgtttagctaaatatttggactttctagtttattcatgtaaaatattttttttgataggaaaaatacatgagactaccctaaattgtgcttgattggtgtttctgacacaagtagagacaagtttattcagatctatgaagaattatgctctcaaagatgcataattctggacaatttgcatcacttgtgttcatagatggaagtattcatgcttaatctgtttagtgttgatgctaatatgtgatggatactgatactgttctatttgaatttatgctagctactccgagtccttttggttttcataaccatggttgggactcaatggtccaatgtatccagtacatactgcaaggacatggcatcaagcgtatatcgaccccacagtgtcacaataactgaatttggtgctgttggggatggtgtgactctcaataccaaagcattccagaacgcaatcttctacctcaattcatttgcagacaagggtggcgcacagctcttcgtgcctgcgggaaggtggctgacagggagttttagtcttatcagccatctcactttgtcactggataaggatgcagaaataattggatctccggtaggataactcacatactttgcacatgataattacagccaaaatatttttgtgtgcttatgacatggtgctcgtgcacacagtatcatatattgccaaatcttatgttgatcaattgttccctaagaaccttgatatgaacactaaaatggtatttcgtagagacttgcacaaattcagttttcttgaagtttagaaaaaatgattaattaaatatttactttaattgatacagaatgtttttgttataatttcccaaatgtatttttcaggattcatccgattggccagtcattgatcctcttccatcctatgggcgaggtagagagctccctggaaaaagacatcagagtctaatttttggaactaatctaacagatgtaataattactggttagtaagtactatatctgcaccatgcatttctcttgggatgttactgtagttattttgtcagtatgtaaaaatctggtactcttggcaggcgctaatggtaccattgatggccagggagccatttggtgggattggttccacagcaacacactgaattatactaggccacatcttgttgagttgatgtactccaccgatgttgttatatccaatttaaccttcaagaactcaccgttttggaatatccatcctgtatactgcaggttggttgtctgaatagccacttgctttctgttaaatataagaattcattcacaactgtaaatttattgtctagagtgcttttgctaaataaacagccaagtgcttgtccagcatgtcacaatcctagcgcccctgaattcaccgaacactgatggcattgatccaggtaatatgaagttctgaatcattatctcccttcaatttaacctgattgttcataatgtcttacttcctcacttttcccatttagcattgcattgcattaagaaaaatggcaaaagaaaaaagtgactgcaatatcaatatgtcattcacaggctctttcttcaatttgccctgctttgtgcttcaaaatttgaaaaaaaaaaagaatccttagaacttccacttactgctgagattctggacatagaagttctcaaggaatcttcacccaaaaaaaattctgaaagaagattaaaattgttcttttgtgaagtgatcgtttatactctgctagagttttgaggtaccaatagaaaaggtattactgttttatgcaaaattaccaaaaaaagatagccctttaccactttggcaaaaaacactgctatgcaacagatacatttattttgtgatattctttcttgagatgcaactttaaccaaggttacggtacaccagttatgtattaacactatatatccatttagcatatttgcatctataactgtggtactaatggagcttcaatccattcagattcgtccacaaatgtctgcattgatcattgttatgtcagaaatggagatgatgttattgtcataaaaagtgggtgggatgagtatggcatttcctttgctcgtcctagcacaaacatcagtatcagcaacatcacaggagagacaaggggtggtgcagggattgcctttggaagtgagatgtcaggtggcatatccgaagtccgggctgagggtctccgcatcgtcaactcaatgcacgggatcagaatcaagaccgctccagggcgtggagggtatgtgaagaacgtgtacatatctgatgtgagcatggacaatgtttcgatggccatcaggatcaccggaaactttggtgaacatcctgatgacaaatatgatagaaatgctctcccaatgataagcaatattacaatcgaaaatgtggtcggcgtcaatgttggtgtcgctggcatcttggaaggaattgagggggacaacttcagcagcatttgcctgtccaatgtttccctcagtgtacagtctatgcatccctggaattgttcgcttatcgaaggttattcaaactctgtgatcccagagtcatgtgagcaactcagaacagattgtggacagacaccaatttgctatgatggtggaagttcttcagcaatacatgcacaggcagccagacatagattgtcgagtgccagcagattgctaaatcctttactgaagttggcgatgctgtagagtaggtagagagatgctctatttatttgctgcagaggggcttttgcttcgtgggatgcgtcatgtacatctgattcttgcgattgttttttttttattagcacgatgtttgcttcttgtatatagttgtgggagatgaatgttggtgtaccatgcatgtttttgtcaccatctttgatttgtgatgtatctgttccatagccttttgttgggaagaaaacagtatgatcctccttccaatatgtccagttttgtggatagggtcatcaaaattgtaacttgtaagttgagtagcaacaagagagaagagtcagttttaatc</dnaseqindica> |
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