Os05g0158700

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0158700| Description = Similar to OsGA2ox1| Version = NM_001061247.1 GI:115462224 GeneID:4337875| Length = 5103 bp| Definition = Oryza sat...")
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Gene Name

Os05g0158700

Description

Similar to OsGA2ox1

Version

NM_001061247.1 GI:115462224 GeneID:4337875

Length

5103 bp

Definition

Oryza sativa Japonica Group Os05g0158700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3441634..3446736

Sequence Coding Region

3441705..3442046

Expression

GEO Profiles:Os05g0158700

Genome Context

<gbrowseImage1> name=NC_008398:3441634..3446736 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3441634..3446736 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataggccacagaatcagcagtacatcatgcagccgaggggtgacaaattttccaatgggcaaaaatgtgttgttgacaggattggccatacttttttccactgctccatggaaagacccatcagtgcgtggatcacaagtatcactgcccctgccactacacaacctctgggacatttcattttatcttaccataaagaggactccttgcatgtgtgcctcctttcttttgtttggctttatatggatagcatagatatgctctttaggggcctggatcattttattctcatcagacatgtgtgtacttccatgtgggcccctgtctgttgcatttga</cdnaseq>

Protein Sequence

<aaseq>MDRPQNQQYIMQPRGDKFSNGQKCVVDRIGHTFFHCSMERPISA WITSITAPATTQPLGHFILSYHKEDSLHVCLLSFVWLYMDSIDMLFRGLDHFILIRHV CTSMWAPVCCI</aaseq>

Gene Sequence

<dnaseqindica>4691..5032#gtttgcctttcaggcatttcgccgaacactcttggagcaagcgagcggcggaaggacggcggctcgccgccgagggcgacggcgtggcgggacagtgagggagccttatatcaactcggaaagcacgtggaaggctgcgcaaatggggatcggcggcggcggcggggatggagctgctccaagccggaggggctgaaccgcgaccaccaggttttggctcgtcagggtctccgtgccgccgccgccaccggcggcgctggtgttcttgggccgcgcgtaggatgggcggaggccggcggcctcaggaatctcctgctgctccggttgctgtagctgcaggtaaaggtaagggcatgtcttgtagccgcgcgggtgttgtgaagtagtggatggctgcacaggttttcgttgcagttccgattgattgctcgtgcgcagctctgggctccgagaagatgcagtttgtgcaggaaatgttcttctgtgtgagaatcgttcgctgccacatgccaacttagtagagtaccaaatctagtgtcaggtttttgaatgtctaagcattgtgggcacatgactacattgtcgatctccctgatgctggaggcacagttggaacctggtccgattttgtgcactctagcatgatttgtgtggatgtggtggatgaagtaatcgacatattcgggcatttcttgtcctggatgttggctaaatgtttggcaccgcaagcgagctatcatcatcggtatctgaccatctgatgcgtgaagccacatgaaattgatgacagcctgcgacatttcaagttgctatttgcgagccaaccatttgtttcagggatgtagtaatcatgccattccctttagaatttagtgtgcccttctccaattttgaagcatgccctttctggacatgtttctgtttcagtactaatcaggtgcatctctgcaatatttgagaaacaagtaagcctggtgcgcgtgtgttccccttttgtttcaaaaagattgtttttggatgatgacaaactgacgatttctttgttggcaagttcaggtagcataggcatagcccaacctgattctgaacgatttaaagatatcaaattaagaaacctgagtacagtcctaccattcccttctgaacagaatatttatgacttgatatacatgtggttggaatgctcatatttatattgctttatgattcttgaagttgaggacattcattaaaggatgctttttgaacactgtttttaaacaacacccagtttctgctttagttattagtgctgaacagacatttctgcaatgtcccacttaaattgatacttatggaacaaaattcactttatatagtaaacttagagcaatcatttctaaagcattattttgcaggttctagattatttttgagattggttgtaatttgatcagttccctttttgttataaacagcaagctcaatgaatagttccatcagattggagctactttgtcctttagttggttgcataaccaatgtcttatctctgtttttatcttccaagaattaccgttgacttcatgaaagaaaatgttctgttgacatactgttatttttgcgtattgcaggctcacagcccttggataaggtgatgtaatggtggattttgatctactctgttgtgtatagtacatgctggtaagtgatataatgaaaatgctttgagggttctttttattttttgaacagtgctgtcaggtttcatgattattcttatctccatgaattacttgatcactcttttttttttattttacagattatatcagcctgcatgaatttgggtagttagagtggccctgaggaatcattgatgcagtcatcatctgccgttgtgactacacaccatgcagggaagattaatgggaaggattgtgattatacaagagtaaaactattgttggttttcttgcctgcagctgaccttgactctggttgcaagcaagggcttgaacttcgtaattaaagactgtgttaaccgcctattaaagaagaatgggggtggctgaactaggtacacaccatgcaaccaacatccttcagtaagatcatcaaatataatcttttcctgcttcagtatgtattgatttttgagagagtcacactactatataaagaagtgaaaagtttcgaagtgaatatctttgtatagttgtataattgaaaatagaaaactgcatgtataattgaccgccaccagaccacttcacggatttgctgtgatttatatcacaataattgcttatcactgactcattctttattaataatatatgcatacggttctttaatgatatgtatcttttggttcctttctgtttctgccattgaaaaagaaattaggaggtgcattgaaatataaattgggaggtagaggtgcatccgttaggcagtatcttttttttactaccctcttatttgcaactgacttataatatcatgttctttccgacagtgcatgaacatatatatatcataaaactctccattttgtttgatgtgatgttggctctacaattatctcccattcacaggaaaaaccatatgtaagttgagttgacacttggtgactgtcctgaagtatgaaatttaatctagtgtaataatggtgtggtttgcagaattacttgcaactagcttatgccaaccatgtgtcaaaagtattctgatttctcttaagatttcttaatagatcatagttctcaaaaactatctattgtgctctgtagttaggtcttacttttgtgctttagagggacaaagggaacacggatagttagctgaaaaggctatattacatacttccatacaaccatagcttatatacaatgctagcaatattacacatccgtcaactaactcattacatataagagagaacatggatagttagctgaaaaggcgacagtacattacttccgtacaaccatagcttctgtagactgctaacgatattacacacccgtcaacttaggcactacaccatcataatagtgagatatctgacgatagtagccagactgccagagagccaaaattttggggacagtttcagcttcctaatccccactggtccataggcatcgtctgcaatttaaccagcaattcctatgcttttccctcactggcattgtcgctgtcatcatcgtcaattttgaagagttctaggcggctgtggctcaggcggagtgagtacattgtcgtcttgtactcagcccaggtgaatgatcggtatcggcgtgggctgctggctgtgattgtctctgggagtgccgagattcgtgcatgcaggggtggtgatgcgaagtatattgtggacagccttggcctgcaggcggttgcaattaccctgtgccggatacttatcagcctcccatttgtcagagcctgaagaaataaaggccaaagaaaggataagccgaagaatgtcaggaatgcaaaactatgtccaggcttacagcatcatgttttagtgatttgtttttttaagttgagtaaaacagcggtagttgcaggatagaaagagatttttttgtcagctggtaagaattgcagcaatacaatgaatttgagtctgaaaataacaaacatatcagtgttgcattttttttgacaaaagaaacattgttcagcagtgctgcagccttatgaatcaaatgattaaatatatattactttcctgtgtgttttgcagtgagcaaagaaacattttttatgaataactggaagaaagccacataatttgtaaatcatatgatagtcaatgcggtccttttataatctatgaaataatttctttgcggtccttttataatctatgaaataatttcttttgataatagtaaaccttattctgatatatgtaatgctgtttttttttgctctagtcatttactgtgactacctggaggacatcaccaacattgacgaaaatggccgatgggtccgatggcacctgaacccacatctccttgccctcgtggtccggcacaaacacctgtagcccttccacatcgtttgctcggagcaagctaaggatctgcgggtcagagtgctcgccgaacccaatgcgcccacctgccatcagattcccaccattgctagccttggtgctaacaaggctcttgatattgcattggtcatcatggtcaagtttgtgaatgttgcatgatggagggtagtggttgatcctcaggaggcagtcactgtcagcgtttgtggtaagcttgctgaagtatctggggtccttgagacctagcccctctcctaacaggtccaggatctcacatgcgagcttcttcatggcttcaatgtactcattcacaatagcactgcaacagagtgagggaggatatcagcaagtgagcacaatcaacttgaaattgattttatcaaaagaatgctgttatcacagaatcaggttggatgtgccatgacaagtaaaaagaagctggagaaagaggagcaaggtctttgactgattgatggctgcagcaaatcaaaagctgcacccaccctccctcggcatgcctgcctgatgagttagaaaagatgatacactgatgggtatatgtgtatgcctctgtgcttgtgcaccaccatctacaagacgtgatatattcgtttcttgtgaatcttgtgatgcatggataggccacagaatcagcagtacatcatgcagccgaggggtgacaaattttccaatgggcaaaaatgtgttgttgacaggattggccatacttttttccactgctccatggaaagacccatcagtgcgtggatcacaagtatcactgcccctgccactacacaacctctgggacatttcattttatcttaccataaagaggactccttgcatgtgtgcctcctttcttttgtttggctttatatggatagcatagatatgctctttaggggcctggatcattttattctcatcagacatgtgtgtacttccatgtgggcccctgtctgttgcatttgacaaaaagaggttgttcttccttcttgtcttgcacttttcatatagcaaaatggttactgtgaagatttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0158700, RefSeq:Os05g0158700