Os03g0841900

From RiceWiki
Revision as of 19:46, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0841900

Description

Amine oxidase domain containing protein

Version

NM_001058390.1 GI:115456508 GeneID:4334739

Length

4352 bp

Definition

Oryza sativa Japonica Group Os03g0841900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36244498..36248849

Sequence Coding Region

36244498..36244812,36245200..36245436,36245529..36245687,36246220..36246411,36247243..36247530
,36247836..36247889,36248108..36248218,36248327..36248558,36248644..36248849

Expression

GEO Profiles:Os03g0841900

Genome Context

<gbrowseImage1> name=NC_008396:36244498..36248849 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36244498..36248849 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccgccgccttggcctcccgcgcgctgccgcctccgccccgccactgcgctcgccgcccgcgcgctccaccgaccaccgccccacggccacgacgcggatgcgcggccgccgctcgtcccgcgcgctgcagggcggtggccgccgacgagcgccccgcggacccctccatccccgagggcgaggacggcgcgctctccggggaggcggagaggccggaggcggacgtcgtcgtcatcgggagcgggatcggcgggctgtgctgcgcggggctcctggcgaggtataaccaggacgtgctcgtgctcgagagccatgaccgccccggaggcgccgcgcactcgtttgacatcaagggcttcaacttcgactcgggcccttccctgttctccggcttccagtccagaggcccccaggccaatcccctcgcccaggtccttgatgcgctaggcgaatcagttccatgtgcctcatatgattcctggatggtttatgtacctgaaggccagttcctttcgcggataggtccaactgatttcctcaaggaccttgatgaatttgttggtgctgatgcagtccaggagtggaaaaagcttcttgatgcagttattcctatctctgcagctgcaatggctttgcctccactttccattcgaggtgatttaggtgttctctccacatctgctggtagatatgctccttctctgttgaaatcaatcctgcaaatgggacctcaaggggctcttggtgctacaaaacttctaagacctttctcagagatcgttgattcattgggcctgaaaaacccctttgttcgtaattggatcgatctcttgtgttttctacttgctggagtcaaatctgatggtgctctttctgcagaaatggtttatatgtttgcagaatggtataaaccaggatgctcgcttgagtatcctcttgagggaagcggagcaataatagatgctcttgtgcgaggaataaaaaaatttggtggcaggcttgctcttcgttcgcatgttgaaaagattttaattgagaatggtcgagcagttggtgtcaagctacaaagtggacaaattgtgcgcgcaaggaaagcagttgttagcaatgcatctatgtgggatactttggatttgctgccaccagatgctgtcccaagatcatatcaagacaaagtgaaagcaactccacaatgtgaatcatttatgcatctccacttgggttttgatgtcgagaatgccagagaggaccttggaatccatcatattgtggttaatgattggaacaaaggagttgatgctgaccagaacgttgtattgatatcagttcctactgttcttggaaatggcttagcaccgcctggaaagcacgtcctacatgcttatacaccaggaacagaacctttcagtttgtgggaaggactagataggaaaagcgccgagtatcgaaggctgaaagaagaacgctctgaggtgatgtggaaagccgtggagcttgcccttggtccaagatttagcagagaaaaatgcgatgtgaagctggttggatcaccattaacacacaagaggttcctccgaagaaatagaggaacctatggtccagccataaaagctggggaggccactttccctgggcaggcaacacctataccccagctattctgctgtggtgactcgacttttccaggcatcggtgtaccggccgtcgctgcaagtggtgcaattgtcgcaaacacgctagtctccgtgtcacaacattcagagcttcttgatgctgttggaatttga</cdnaseq>

Protein Sequence

<aaseq>MASAALASRALPPPPRHCARRPRAPPTTAPRPRRGCAAAARPAR CRAVAADERPADPSIPEGEDGALSGEAERPEADVVVIGSGIGGLCCAGLLARYNQDVL VLESHDRPGGAAHSFDIKGFNFDSGPSLFSGFQSRGPQANPLAQVLDALGESVPCASY DSWMVYVPEGQFLSRIGPTDFLKDLDEFVGADAVQEWKKLLDAVIPISAAAMALPPLS IRGDLGVLSTSAGRYAPSLLKSILQMGPQGALGATKLLRPFSEIVDSLGLKNPFVRNW IDLLCFLLAGVKSDGALSAEMVYMFAEWYKPGCSLEYPLEGSGAIIDALVRGIKKFGG RLALRSHVEKILIENGRAVGVKLQSGQIVRARKAVVSNASMWDTLDLLPPDAVPRSYQ DKVKATPQCESFMHLHLGFDVENAREDLGIHHIVVNDWNKGVDADQNVVLISVPTVLG NGLAPPGKHVLHAYTPGTEPFSLWEGLDRKSAEYRRLKEERSEVMWKAVELALGPRFS REKCDVKLVGSPLTHKRFLRRNRGTYGPAIKAGEATFPGQATPIPQLFCCGDSTFPGI GVPAVAASGAIVANTLVSVSQHSELLDAVGI</aaseq>

Gene Sequence

<dnaseqindica>4038..4352#3414..3650#3163..3321#2439..2630#1320..1607#961..1014#632..742#292..523#1..206#atggcttccgccgccttggcctcccgcgcgctgccgcctccgccccgccactgcgctcgccgcccgcgcgctccaccgaccaccgccccacggccacgacgcggatgcgcggccgccgctcgtcccgcgcgctgcagggcggtggccgccgacgagcgccccgcggacccctccatccccgagggcgaggacggcgcgctctccgggtacgtttcgcaccgcaccactactctccggcgattgatcgatgctcataggcatagccggttttgcgttctgaatcggggtcagggaggcggagaggccggaggcggacgtcgtcgtcatcgggagcgggatcggcgggctgtgctgcgcggggctcctggcgaggtataaccaggacgtgctcgtgctcgagagccatgaccgccccggaggcgccgcgcactcgtttgacatcaagggcttcaacttcgactcgggcccttccctgttctccggcttccagtccagaggcccccaggccaatcccctcgcccaggtgatacttgattgcagcaaattgttcttcccattatggcattgtgggtttagagcaagttaattgtggtgagagcttggaagctgatgtggtcattcaattggtcaggtccttgatgcgctaggcgaatcagttccatgtgcctcatatgattcctggatggtttatgtacctgaaggccagttcctttcgcggataggtccaactgatttcctcaaggtgagcagtcttttgccattagatatgtaatcgttggaaccattcacttaactttacctgtgacattatcagttctcactcagatatgttatttcttctcaaatggtatggctggttattgaacttagagatgttctctcccatttatgcagttttgatgctaacaatttatttatgttggatgctctgaacacgattctgactcgcaattctttcaggaccttgatgaatttgttggtgctgatgcagtccaggagtggaaaaagcttcttgtgagtttcttttgtctgcattgtgactctttggaaaatacttttgcagccatagtcgtgtagatgaactcactactcactgaactggagtactaagcaacacatgagcaatccataaattattaatgctttcctttcctgtgctatccttttataggcatattttgtaaaaaatgtaaaagcaccgtacttgaatatgatatgatactagtttcttttccaggatcatttcttattttttttatctttgggacattttatgttccactagagcatgagctaataccatactaaaacaatctcaggatgcagttattcctatctctgcagctgcaatggctttgcctccactttccattcgaggtgatttaggtgttctctccacatctgctggtagatatgctccttctctgttgaaatcaatcctgcaaatgggacctcaaggggctcttggtgctacaaaacttctaagacctttctcagagatcgttgattcattgggcctgaaaaacccctttgttcgtaattggatcgatctcttgtgttttctacttgctggagtcaaatctgatggtgctctttctgcagaaatggtaaactaatttccatcaggtttacttccatttgcagtagctgttgctttgcctaacattgaattcattatccttccatttgtgttttcctttaatttcagtaccttttgctttgccataatttagtgaattaccatttccaactggtttccagaaacaacatttagttcactgttgaaaccgaccaataccattatggcaatatatagatgaataagagaataattttgttgcacaacttctatcaatatatttgtgggtgcattgaccctaatggtgaggacatcatgggattagtattacatcggtgcaatgttcctcttctttccataaaatagctgtgctggtgttacacgttctcatgtcatctgaacttggaacaacctcaatgtagcatattctacatctagtttatttagcagatactatttcagaatctatactattccgtagtcactctcatgtgaccctaaaccagtcaatgcagtctacatggtagtgattgtatttatagtggatctaaattgtataggttgatggcatgcattcccattggtggatggcagtgacttatacctgaatcttagcacttttatcttgttggagtgctccacagcaactggatgtcgaaatatttggcactgagcaatgcgattcattgcatcaaaaaacaatgcgattctgaataagttacagtgcagagttttccatatatttacctctatgatacttagctcccatctgttgtgtctattcaaattcacacaaatactttaaaagtgatgattatgatgttttctgtttcatcatttggtctaactacaaccacaggtttatatgtttgcagaatggtataaaccaggatgctcgcttgagtatcctcttgagggaagcggagcaataatagatgctcttgtgcgaggaataaaaaaatttggtggcaggcttgctcttcgttcgcatgttgaaaagattttaattgagaatggtcgagcagttggtgtcaagctacaaagtggacaagtaagcatcttctaaggatatgttattaccaaacaaaaaacaaactgttacctagtaggaaaggatttgtgtgatacaagttatgaacacaaaaccaatgatagcaatgcagatccatattattactattggtaatgatttcatcaaatatgatacttacattaccttgagcctcatggatgcatcaaagtctttagtgtacaatccacgataatcactatatattttccctccctccctccaaaaagtaccatcttcagtactgcatatcacatttagtttaggggctttaggccttggtccacccatttgcagtagtggcagaccatagaaatcatgtaggccaagatggcatatcttttctcgccctgttgtcttatgcaatctatttttgagaggcatgattgtgccacatgttattctaggtcactagatagtaacctattcccttgtattgacttccatcatgcaacctatgttttgaagattcagcagctgttgaaatcttgtcgggaatttgcttctcatgcagattgtgcgcgcaaggaaagcagttgttagcaatgcatctatgtgggatactttggatttgctgccaccagatgctgtcccaagatcatatcaagacaaagtgaaagcaactccacaatgtgaatcatttatgcatctccacttgggttttgatgtcgaggttggttgtcatacactcatattcattaagatgtgtgtttttacattaactcaggcaatctctcacggtaactacttacgtaactggaacagaatgccagagaggaccttggaatccatcatattgtggttaatgattggaacaaaggagttgatgctgaccagaacgttgtattgatatcagttcctactgttcttggaaatggcttagcaccgcctggaaagcacgtcctacatgcttatacaccaggaacagaacctttcagtttgtgggaaggactagataggaaaagcgccgagtatcgaaggctgaaagaagaacgctctgaggtacaacatagaacaaatgctgtgctcttgttcttctagcgttactcccctgataactgggaattagtccctagaaatccatgcgctttaacaccgttttatcagttcagatatttcctagaaatttcatctctttacccttcttttccacacgtgcaaacatgggtggcttgtgtagccgtctagactccagaggctagaacaataatctactacatgttagaattttaaggaagcaattttcttgactcataggaagcaaatatgatcaaaagttaagtaaaaagttatcgaagctagacacactttttataaagtactcttttattcactgattgtaaatagaaacttgctgtattctatgataagttaatttaaacctctcaggtgatgtggaaagccgtggagcttgcccttggtccaagatttagcagagaaaaatgcgatgtgaagctggttggatcaccattaacacacaagaggttcctccgaagaaatagaggaacctatggtccagccataaaagctggggaggccactttccctgggcaggcaacacctataccccagctattctgctgtggtgactcgacttttccaggcatcggtgtaccggccgtcgctgcaagtggtgcaattgtcgcaaacacgctagtctccgtgtcacaacattcagagcttcttgatgctgttggaatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0841900, RefSeq:Os03g0841900