Os03g0849600

From RiceWiki
Revision as of 19:46, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0849600

Description

COG complex component, COG2 family protein

Version

NM_001058433.1 GI:115456594 GeneID:4334786

Length

5523 bp

Definition

Oryza sativa Japonica Group Os03g0849600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36586817..36592339

Sequence Coding Region

36587081..36587194,36587556..36587690,36587771..36587893,36588187..36588288,36588431..36588637
,36589181..36589295,36589386..36589595,36589682..36589781,36589995..36590156
,36590284..36590620,36591019..36591225,36591831..36592283

Expression

GEO Profiles:Os03g0849600

Genome Context

<gbrowseImage1> name=NC_008396:36586817..36592339 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36586817..36592339 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggatctcgccgtggcggcgccgccgccgacggacctcttcggcgagcccatcgaggcgcacccgccgtggttcaagcccgactccttcctccgccccgacttcgacccggacgcctacgtcgccgacctccgctcctacgtgcccctcgacagcctcgccgccgagctccgctcccacctcgcctccctccgcgccgagctcgtcggcctcatcaaccgcgactacgccgacttcgtcggcctcagcgcccgcctcaagggcgtcgatgccgccgccgcgcgcatgcggcccccgctcgccgagctcagggacaaggtcgcctccttccgcgccgcagcagccgccgggctcgccgcactccgctccggactcgagcagcgcgcggctgccacggctgcacgggagcttctcgagctgctgctcgacacctcccacgtcgtctctaaggttgagaaactgatcaaggaactaccatccgccccatctgattcatcaaatgttgaggctgtttctggtgataagggctactcaggcaacgttgccacaccaccaaacatggatgatgggacagatgttagggagacacaaagcattctcttagaaagaatcgccagtgagatgaaccggctcaaattctacatcagtcatgcacagaacctcccttttattgaaaacatggagaagagggcccaaggtgctacaaaactacttgatggtagcttggagcgttgctttgtggatggtctagaacatcgtgatgacaaagtaatatacaactgtttgcgtgcttatgctgctattgacaacacatcttcagctgaagagatattccgtacaacagtggtgtcgccgttgatccagaagattgttcctcaaaactatgcaaaagtggttgctggggtatcttctgatgacctagaagatgattatgagcagataatgcaatgcgtagaaaaagattgcaaatttattttggagatatcctcgttggcaaactctgggcttcatgtttttgattttctggccaattcaatactcaaagaagtccatttggcaatccagaagggaaagcccggggcgacctctcctggaaaacctaaacagttcctcaaaaactacaaagcaagcttaagattccttgattttctggaaggttactgttcatctaagcctgctgtaacaaagttccgctccgagcctgcttatgccgatttcatgcgacagtggcatgttgctgtctacttcacattgaaatttcaggacattgctggtggtcttgattctgtgcttacagccacaattactcctgctggaatgcatgacaatcaagcgaagccgcagacactgttgttgaaacaaagcgttaagctcttagaaagtttgcaggcctgctggagtgacgatgttcttgttttctcccactctgataagttcctccgcttgtctttgcagcttatttcaaggtatacaacatggctttcttctggtttggctgcacggaaagcttctgatgggggctcaagttctcctgcggatgctgaatgggcactatctgtacctgtggaggatttcatttatgtaatgcatgatgtaaatgctgtaataagcgagcttttggaatcaggccaatttgtggaacatgtaaaccaattgctagcatcatgcccaaccgaagtacttgctctcgtgaaacacagtatactgcaagctgttgagcctttaaaggagttgttgcctgctataatgaatgtcatgattatggtgatagttaaaaggtctaatgaggacttgaagcacctaaagggaataacagcaacatatagaatgaccaataagcttccagtaaggcattctccatatgtatctgggattttgcatccacttaaggtttttcttgaaggtgaccgtattcactatttatcagaagatgataaagcaaagctgcgccgtggatcgacagataagatcacttcaatttattatgacatggtgtctgaagtagtcactgtggcaaggaaaactgaatcatcattgcaaagactacgtcaaggtgcacaaagacgagtaggagctaataccgatacctcggataacatcatttctgatactgacaagatctgcatgcagctatttcttgacattcaggaatatgcacggaatcttcgtgcaataggaatagatgcaagggaaatcgaaacattcagagctttatggcagtgtgttgctcctagagacaaacaggataacatccagttttga</cdnaseq>

Protein Sequence

<aaseq>MADLAVAAPPPTDLFGEPIEAHPPWFKPDSFLRPDFDPDAYVAD LRSYVPLDSLAAELRSHLASLRAELVGLINRDYADFVGLSARLKGVDAAAARMRPPLA ELRDKVASFRAAAAAGLAALRSGLEQRAAATAARELLELLLDTSHVVSKVEKLIKELP SAPSDSSNVEAVSGDKGYSGNVATPPNMDDGTDVRETQSILLERIASEMNRLKFYISH AQNLPFIENMEKRAQGATKLLDGSLERCFVDGLEHRDDKVIYNCLRAYAAIDNTSSAE EIFRTTVVSPLIQKIVPQNYAKVVAGVSSDDLEDDYEQIMQCVEKDCKFILEISSLAN SGLHVFDFLANSILKEVHLAIQKGKPGATSPGKPKQFLKNYKASLRFLDFLEGYCSSK PAVTKFRSEPAYADFMRQWHVAVYFTLKFQDIAGGLDSVLTATITPAGMHDNQAKPQT LLLKQSVKLLESLQACWSDDVLVFSHSDKFLRLSLQLISRYTTWLSSGLAARKASDGG SSSPADAEWALSVPVEDFIYVMHDVNAVISELLESGQFVEHVNQLLASCPTEVLALVK HSILQAVEPLKELLPAIMNVMIMVIVKRSNEDLKHLKGITATYRMTNKLPVRHSPYVS GILHPLKVFLEGDRIHYLSEDDKAKLRRGSTDKITSIYYDMVSEVVTVARKTESSLQR LRQGAQRRVGANTDTSDNIISDTDKICMQLFLDIQEYARNLRAIGIDAREIETFRALW QCVAPRDKQDNIQF</aaseq>

Gene Sequence

<dnaseqindica>5146..5259#4650..4784#4447..4569#4052..4153#3703..3909#3045..3159#2745..2954#2559..2658#2184..2345#1720..2056#1115..1321#57..509#agaggaggaagcgccagatctccacacccacccgcgccgcagatccagccagagccatggcggatctcgccgtggcggcgccgccgccgacggacctcttcggcgagcccatcgaggcgcacccgccgtggttcaagcccgactccttcctccgccccgacttcgacccggacgcctacgtcgccgacctccgctcctacgtgcccctcgacagcctcgccgccgagctccgctcccacctcgcctccctccgcgccgagctcgtcggcctcatcaaccgcgactacgccgacttcgtcggcctcagcgcccgcctcaagggcgtcgatgccgccgccgcgcgcatgcggcccccgctcgccgagctcagggacaaggtcgcctccttccgcgccgcagcagccgccgggctcgccgcactccgctccggactcgagcagcgcgcggctgccacggctgcacgggagcttctcgagctgctgctcgacacctcccacgtcgtctctaaggttcgatcctactccgccgctcctggttaaacgcgaatgtagcttattcctattagctaaatttccccatcagcactgcattggtagatccgactttatatgggatctgtgacatctgtctggaggtcaaccatcaaccttctgaaactgtgcccttccagtccccttcccatcgatgttcgcctgttcattttcatgaatcatatgaaagcttatagtgtttgactctagttcaaactaggaaattggagaggtttagcacttccattttaatgcagcaatagtacatcatattattgctgtgaacatttttttgtccctgtatgcggatgatccatatgctaactctgagtattattttatccatgaatgtagatgcaatgatgcatgtacatgaagaaattggcgtgattaaacctgtcatagtgctattttctaccatgttagaaaaattgccctatcttatgactgatggtcttctcagattattttgtcaaggtttccattggttcacaatttgcaacatcattcaattgtataaaccatcacctaaaggtgttactgtcaaggcacctgaaatccacattttcctgttgttcctccaggttgagaaactgatcaaggaactaccatccgccccatctgattcatcaaatgttgaggctgtttctggtgataagggctactcaggcaacgttgccacaccaccaaacatggatgatgggacagatgttagggagacacaaagcattctcttagaaagaatcgccagtgagatgaaccggctcaaattctacatcagtcatgcacaggtttgtgacactaactcaccaataaatactggtccatttgcacctctcactcacataccttctctttttctgttccgttgctgagaaaaaccattagggaaaaattgtaacacaaaaatgacattagttgtttctccggaaaggtttatttctgtgtcacaattgaccattgaaagtgtagtatacacagcaatacaacgatgtgatataacatcttgattaataactataagaaaaatgtctacccacatgtcatagatttggttgtcgcaaactgctgaagtgtcaacatggtttcatattggtagcttttgttttattgctacctgatgctaccttttgcatctcagtgccacttatatttatgattcttatcctgttacattatggcagtacagaacctcccttttattgaaaacatggagaagagggcccaaggtgctacaaaactacttgatggtagcttggagcgttgctttgtggatggtctagaacatcgtgatgacaaagtaatatacaactgtttgcgtgcttatgctgctattgacaacacatcttcagctgaagagatattccgtacaacagtggtgtcgccgttgatccagaagattgttcctcaaaactatgcaaaagtggttgctggggtatcttctgatgacctagaagatgattatgagcagataatgcaatgcgtagaaaaagattgcaaatttattttggagatatcctcgttgggtaattatgatagacgaatttcattaaaaagctgcatcattgcttagtattttttaagttgaatactaaatgctgcataaggacttagattgacacatcatctaattttctatcgattgatttgcagcaaactctgggcttcatgtttttgattttctggccaattcaatactcaaagaagtccatttggcaatccagaagggaaagcccggggcgacctctcctggaaaacctaaacagttcctcaaaaactacaaagcaagcttaagattccttgattttctggaaggtattgctaaattatgttgcattgtgattattgttttgtatttaaccagctaagcctactacaataaatactatgcttgctcgcaagttatgctggtttatacatttgggacagccattatataggactaacaaggaatgtggttagactgggttaaagatatacatatatgactattgggagttgctattgattgaatatttggtcctgtaggttactgttcatctaagcctgctgtaacaaagttccgctccgagcctgcttatgccgatttcatgcgacagtggcatgttgctgtctacttcacattgaagtaagcataaatatttaggctatgctgctgtcaaatgctcttcagaacttcatttctaacttgacttcaactggttcaatcataagatttcaggacattgctggtggtcttgattctgtgcttacagccacaattactcctgctggaatgcatgacaatcaagcgaagccgcagacactgttgttgaaacaaagcgttaagctcttagaaagtttgcaggcctgctggagtgacgatgttcttgttttctcccactctgataagttcctccgcttgtctttgcagcttatttcaaggtatagctactgcagaggattctttgccttatcttttatgatttaacctatggtgattgaccctttttgtattctacattttacaataaggtatacaacatggctttcttctggtttggctgcacggaaagcttctgatgggggctcaagttctcctgcggatgctgaatgggcactatctgtacctgtggaggatttcatttatgtatgtcatgtctacaatactccttgaattccaagtgtgttatttcagtcatctgaacctactgcttttcatccttcatcatgaactttttggcttaagactgaaatagtattgtcatcttagccagtgacattgagatggttgcatagattagcaataatttgagactcacactaaggtttaagactataagtgcttaggagggcatcccaaagatgacaccttgcacttctagcccaacaaacattccaggaacacatatactgtggttactggttagttagaaagtctacagttggtagcggtgtagcatatcaggtatgacttgtcccttttttttcatgtgtaaactggaaatagttgttcggcttgttcttcatgatgtgctctagattggaagctagtcaatattgattattacgtaatcttacccattattttgggccctgattctcatatttcttataaaatttgaaacatagaagattatggccatcaggcatattttgtgaattgcatttaaattctgtatttgatgcacaggtaatgcatgatgtaaatgctgtaataagcgagcttttggaatcaggccaatttgtggaacatgtaaaccaattgctagcatcatgcccaaccgaagtacttgctctcgtgaaacacagtatactgcaagctgttgagcctttaaaggagttgttgcctgctataatgaatgtcatgattatggtgatagttaaaaggtctaatgaggtgagtacacctaagtcagcagaagagaagcaatgtcatcatttcttactgtatctgtggttcatcactcgtatggtacaataagacaattttgagtcatggtccttctgttcttaccaactatatttctggttgattgtaggacttgaagcacctaaagggaataacagcaacatatagaatgaccaataagcttccagtaaggcattctccatatgtatctgggattttgcatccacttaaggtgaatggacatcctgttttacttctctgctttatgatttatgtttctcaaaagtgaagcatcaaaagttaactacttaactggtagcgtctatgtcctaatggctgcattcagtatgtgttcttggcgatttttaagtgccatggtcagtatctagtacccattagtctgatcgttatcaccctcaagaataacttatgttttgccattttgcaggccccgatatttagaaacatgtgtttatgctctttttgcctccatatttcatatgtgatgttcctctgttcttgtaggtttttcttgaaggtgaccgtattcactatttatcagaagatgataaagcaaagctgcgccgtggatcgacagataagatcacttcaatttattatgacatggtgtctgaagtagtcactgtggtaagtaaggaatgcttaactgcttatgagagctcatatctgcttattggtgaattaaaccatttttattgaatataaaggcaaggaaaactgaatcatcattgcaaagactacgtcaaggtgcacaaagacgagtaggagctaataccgatacctcggataacatcatttctgatactgacaagatctgcatgcagctatttcttgacattcaggtttgatatctgtcctttaattttatgctgataagggacatattatatataacggatataagatttattttagggtgtaaattttgcatcaaatgattttttttaagagggtcattgccttttggtttcatcaaagacccaactagtgcttatggttggcttattcaaccttaccattttctgtggaaaacaactttagcatgtaatctgaatgtttctatgttggccatccaatacattttttttttgcaaggaccaatgggtattagttatatgatcaaacatgatacctgtttatgatggatgcactgcaccacatctgacatttctttttttttttttggtttttcttattatgcaggaatatgcacggaatcttcgtgcaataggaatagatgcaagggaaatcgaaacattcagagctttatggcagtgtgttgctcctagagacaaacaggataacatccagttttgatgtaaagatcaatttgagtacatagaagaaaattgccttaggtccctcaatatccgtagatacgtctcgtgttgttcgtttaggatggatgttggaatgatttttatacatagagctctggattttgattgtttcattttggacggtctcctccggattatacaagggtcaagggtacatccaaaatttgagaagtgtatcaaacctcatgttgttggaaacacaccgattctgttgaaagattgttttagtgtcttggtatct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0849600, RefSeq:Os03g0849600