Os03g0854300

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os03g0854300

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001058472.1 GI:115456672 GeneID:4334825

Length

3219 bp

Definition

Oryza sativa Japonica Group Os03g0854300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36833286..36836504

Sequence Coding Region

36833377..36833871,36833951..36834009,36834987..36835056,36835173..36835295,36835383..36835511
,36835815..36836264

Expression

GEO Profiles:Os03g0854300

Genome Context

<gbrowseImage1> name=NC_008396:36833286..36836504 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36833286..36836504 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagaagaacaaggagcccgcgtccgacgacgccgcggccatccgcaccctcttctccgcagacaaccccttccgccgcaagccctccgacgaccagcccgctccaccggcgcccaccgccgcggcgccccgaggcaagcaccccgaacccgaggtcgctgagccgtccgcgaagtcgcgcagggatgagccccggcgcaagaggaagcgggacgaggtcgaggccggccacgagcggcggaggctcggcggcgcacccgcgcctcctcttccggtcgtcggggagaagaggaaggtgcccgaagaggtggctgcggcggcgggggcagggcaagaggaggaggaggcgttcgacgacgagagcaagctgctgaggacggtcttcgtggggaacctgccgctcaagaccaagaggaaggcgctcaccaaggagtttgcggcgttcggcgagatcgagtccgtcaggatacgctccgtgccactcaccgacaccaagattccaaggaaaggagccgtcataaaaggaaaaatcaatgattctgtcgacaatgtacatgcctatattgtgttcaaagatgagcagggtgcacgtgctgctttatctcataatatggccctgtttgatggcaatcatgtccgtgtcgatatggcatgtccacctcgtaagaaacttaaaggcgaaggacctctttatgacagaaagcggacagtttttgttggtaatcttccgtttgatataaaggatgaagaggtgtaccaaaagttctgtggttccagtggttcagaaggtgatgttgaagctatacgtgttgttcgagatccagatacaagtctaggaaagggtatcgcctatgttttgttcaagacaagggaggctgcaaacactgtcgtaagaaaacaggatttcaagattagagatcgccttctgaggcttgcacatgcaaaatcagctgatgcaacaccaaagaagacgacggatgctggcaaaacaaagggtggatcgaaacacaagacagctttaacaccaagcagcaaatcccatgaaggcagtgacaagaccaaacggaaggcgtcaactttgtcataccaaggccttagggcaagcaaatctggtgtggtgaagaaggcgaaggtgagccagcgtccaagttaccaggggaagcagcaaggcaggactagtgagacaggacatgatgctagttctcaaaaagccaagcgccctgctgttgcagcaaggaaggcaaagcaactagccaagaaacgcaagttggatgctcaaactcctgaaaatacacatcggagcaaaaaagcaaagaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAKKNKEPASDDAAAIRTLFSADNPFRRKPSDDQPAPPAPTAAA PRGKHPEPEVAEPSAKSRRDEPRRKRKRDEVEAGHERRRLGGAPAPPLPVVGEKRKVP EEVAAAAGAGQEEEEAFDDESKLLRTVFVGNLPLKTKRKALTKEFAAFGEIESVRIRS VPLTDTKIPRKGAVIKGKINDSVDNVHAYIVFKDEQGARAALSHNMALFDGNHVRVDM ACPPRKKLKGEGPLYDRKRTVFVGNLPFDIKDEEVYQKFCGSSGSEGDVEAIRVVRDP DTSLGKGIAYVLFKTREAANTVVRKQDFKIRDRLLRLAHAKSADATPKKTTDAGKTKG GSKHKTALTPSSKSHEGSDKTKRKASTLSYQGLRASKSGVVKKAKVSQRPSYQGKQQG RTSETGHDASSQKAKRPAVAARKAKQLAKKRKLDAQTPENTHRSKKAKK</aaseq>

Gene Sequence

<dnaseqindica>92..586#666..724#1702..1771#1888..2010#2098..2226#2530..2979#caacaaaagagtttccccctccgcctccgaatcccaaccccaccgccgccgccgcaaaccgtctcgccgtcgcctcgcaccggcggcgagaatggcgaagaagaacaaggagcccgcgtccgacgacgccgcggccatccgcaccctcttctccgcagacaaccccttccgccgcaagccctccgacgaccagcccgctccaccggcgcccaccgccgcggcgccccgaggcaagcaccccgaacccgaggtcgctgagccgtccgcgaagtcgcgcagggatgagccccggcgcaagaggaagcgggacgaggtcgaggccggccacgagcggcggaggctcggcggcgcacccgcgcctcctcttccggtcgtcggggagaagaggaaggtgcccgaagaggtggctgcggcggcgggggcagggcaagaggaggaggaggcgttcgacgacgagagcaagctgctgaggacggtcttcgtggggaacctgccgctcaagaccaagaggaaggcgctcaccaaggagtttgcggcgttcggcgagatcgagtccgtcaggatacgctccgtgccactcaccgacgtgagcaccattgccctgtgcttcgtcttcatcttcgtcctcctcatgcttatctgtgctgatttgtgctttgctgcagaccaagattccaaggaaaggagccgtcataaaaggaaaaatcaatgattctgtcgacaagtgagtgcattcttgcctgtctagtatcaactacgattgtttatgccattgcttaaatagatggcagagatagctacgaaatgcattttttcccctatcctttatgcttgcaatttcaaatggattacatatgaacagattacagctggttgcaattaggacattagcattgaaacaccgattgaaatgggcttgctcacacttctttcttttcctatcctatctcctccccattagttatagctttacaattcgcttctatgccctgaacatttattaagttctctaccatttgttatacatggttaaatgccctgttttttcactctctttttttaccacatttcaccttaaagtgttttcctttaactactgtcttgatatatacaagttatctgtcctatttggattgctagttgaatgtagtataggaaacttctgaatctcaacagtgttgattgtggcacaacttttatttagtgatataacaaacaactttggtgtagcttaggagtcaatattctgcagtttgtttctaatagcgcgtgctttgtttttttactgatgtgcctatgtaattatttctgcgtgcatggaatactttcctcgatcaactaaaatcaccacagccctttactttgtcattttggtttctaccttctgtgctgtttgaagcaaaggaggagataagtgacatgattacccaaatatataatggtgtactaagaccaaaaaggcgcgtgcttcgtatagttcctttaagagcattttgttgatatttcgtatttttcatgatctgatgccatcaactctgatattcaatatatatcccagttattagacgcccatcaatgcacaaggactatatattgattgtaaaatgtaattgattgtgctgagcagctgcatatgtcaaatgtattgtttgcctaatgtttctcagactcattttgtctgtaccttttcaccctttgcagtgtacatgcctatattgtgttcaaagatgagcagggtgcacgtgctgctttatctcataatatggccctggtgagttggctttcttagaactgaaaacatgattagtttatatatctggtatataattcaaaaacttctatgttgtgcctgataagatagtttttcttgattttgatactttctagtttgatggcaatcatgtccgtgtcgatatggcatgtccacctcgtaagaaacttaaaggcgaaggacctctttatgacagaaagcggacagtttttgttggtaatcttccgtttgatataaaggtgagtatcatgtggtcagtattgtatatggtctgtgtaattcttttgaagaaaaggtcagatttattttttttactggcatgtcaggatgaagaggtgtaccaaaagttctgtggttccagtggttcagaaggtgatgttgaagctatacgtgttgttcgagatccagatacaagtctaggaaagggtatcgcctatgttttgttcaagacaagggtacaatcttttaccttcctatttcatctggtgcagtgtgacccactaaataagtcaaaacccagaagtccatttgatgtataatatgtttgtcgataaatggctttactatgtactacgtgattttgaacatcatttattgaagatggtagcattaaccatgccatacaattaaatgctagtactggaggaagacgataacagaaagacttccttgctgaattatgtattcagaaccaagatagccagttgacgactcaatcatacacttttatgctgaccattttaatatctgccatgcaggaggctgcaaacactgtcgtaagaaaacaggatttcaagattagagatcgccttctgaggcttgcacatgcaaaatcagctgatgcaacaccaaagaagacgacggatgctggcaaaacaaagggtggatcgaaacacaagacagctttaacaccaagcagcaaatcccatgaaggcagtgacaagaccaaacggaaggcgtcaactttgtcataccaaggccttagggcaagcaaatctggtgtggtgaagaaggcgaaggtgagccagcgtccaagttaccaggggaagcagcaaggcaggactagtgagacaggacatgatgctagttctcaaaaagccaagcgccctgctgttgcagcaaggaaggcaaagcaactagccaagaaacgcaagttggatgctcaaactcctgaaaatacacatcggagcaaaaaagcaaagaagtaaccatccttaacttgaagattgtcatcctgtctttgtacaagggggttgagtcagattttggacaaaatgagctcctgacattgttaaaccccatgcaagagtgatcttgaaatgcaaggctgatacaaattcgtagtactgtattacttaaattaaagtttgcgctcatgtatactgacattaatgttgttttttccctgtaacatcgtgcactgatatcattcattctgcttttgattg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0854300, RefSeq:Os03g0854300