Os05g0160600

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0160600| Description = Peptidase, trypsin-like serine and cysteine domain containing protein| Version = NM_001061257.1 GI:115462244 GeneID:4...")
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Gene Name

Os05g0160600

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001061257.1 GI:115462244 GeneID:4337885

Length

9678 bp

Definition

Oryza sativa Japonica Group Os05g0160600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3539054..3548731

Sequence Coding Region

3539291..3539308,3539392..3539469,3539548..3539622,3539702..3539794,3539861..3539978
,3541257..3541387,3541469..3541741,3543197..3543310

Expression

GEO Profiles:Os05g0160600

Genome Context

<gbrowseImage1> name=NC_008398:3539054..3548731 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3539054..3548731 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaatgcagtggtatcgtggtcgattggaacaagaccagcaggttggcaacaatcgtaacttgctctgcagccgtgtgctttgatggtgcactagtccatcccaaccccaagttgctcgtacatttgcctaataggtctaccgcagaaggacaattgcttttcttcaatgcacactaccgtattgcattgttggaggccttggtggactttccattggagcctgctaattttggctctagtccaaaatttggacaaaaggtgtttaccttggcaagggacaagaagtcatccttctttgctaggtctgggacagtcctgttgcaggatccaccattttttttgaagtacaaatactggttatctctcagctctgcaattgaactgtgtggcactggaggacctgcgattgatgagcgtggcgatgttgcagggatgacattcggtcgtttgccaaatccggatgtcctctctatctctatcctgcagacatgcattgacatgtggaggagattcagtcgtgttgctcgcccctttcttgatatggacttgatagcctttgagacgttggatattacacaccaggaggagattgaatcggaacatggcattaccgatggtttcatcgtggacttggtgtgcgatgattccactgctgggagacttggtatttccaggggtgatgtcattgtttcatacaatggacttcgtgacttcactctgcatacgtttgaggagtaccttctcaatcttggctggggttttcttgagagtacagatccgagctggacgatcaatttagagcttgagatatatgatcctgttagaggtactatcagaggtgttaccttccctctgggattttctgatatttgcgaggatgtccttgtactgccatga</cdnaseq>

Protein Sequence

<aaseq>MQCSGIVVDWNKTSRLATIVTCSAAVCFDGALVHPNPKLLVHLP NRSTAEGQLLFFNAHYRIALLEALVDFPLEPANFGSSPKFGQKVFTLARDKKSSFFAR SGTVLLQDPPFFLKYKYWLSLSSAIELCGTGGPAIDERGDVAGMTFGRLPNPDVLSIS ILQTCIDMWRRFSRVARPFLDMDLIAFETLDITHQEEIESEHGITDGFIVDLVCDDST AGRLGISRGDVIVSYNGLRDFTLHTFEEYLLNLGWGFLESTDPSWTINLELEIYDPVR GTIRGVTFPLGFSDICEDVLVLP</aaseq>

Gene Sequence

<dnaseqindica>9424..9441#9263..9340#9110..9184#8938..9030#8754..8871#7345..7475#6991..7263#5422..5535#tcgtcggcatttcctccaggatacctggtaaaaagattgctgctaacgatcaatttcaattacaatcccctccaattaccagctgcttctttttttaagactaggaatcgtgcacgtgcaaggcacgtttaaaaatttaggaagtacatttaaaattagaaggtataataaactgtcagaacaggcataatcatattttctgaacattcttgctttccatcatctattgaattgaaaaggttgttaatgacagaaatagccaaaagcaaaaaaaaaaaagtcatttcacatagcctcgtcaaaagactaaccacagtaaggatttcttttaaagaaaaataactttagttaaagggttgccatgctttttccatatagatgaattgctatgtataagaaacatgagagattcctggcacaagaacagattagagaaaggcaaccgaataagaaaacaattcaagagctacaatggtcttctatattcaacaggattgcttcaaaaatctatttatcattgtaacaaatagtggaagaacattagattgatatcgctgatatcttaaagcgagaagatacataacacaacattctttaaattgaagtagccactgacactaattatatttgataaatagtaaacattacatagcataaaccaaaatccatactgtgatagtggtgcaaaatattatttattctaaaggcgtaatggagctgcaaattattgagtagtgcacatttttcctacaaccattatgcctaaggggtggagggtatatcaatgactccaactcttggagggatggtgaattccttcttgctcgtgcgctttcttgggcaaagtagagagagggagggagggagggagggagagggagagggagagggagagagaggcccctatctcactgcattacttctctcacaaaaaaatggaacctgctctgaaatggaaaatggaaatttctaactcaagaatttactggagaacagtcgaacccaccaatgtgaacttaggttactatgcaggtacaaatgcaagggcagtggacacaacaactgttgttttttattagttgcattcgatcagaatgatggagcagcaggatgctctgggtcgtctggttcaaaccttccatacattgatctctgatttctgatttgaatttaaaataagtataaatagacaagtgacaaccaacccgagaggccaagacattcctttcagcacagtccacatgtggattagaggaccatgggctgaaatatctactgaacatactgatgctattcactttagtaccctcaataagttcattttgccttcagaacacaatatgttattcctgtagcaaaacaaaagaatcaggatcaccaatatataaaaattgttcgatcctatgtagttatgccctgaacataatgaacaacgatgacggactctggacgcaacatctcccaatgaattaggggaataaacaatagagggatataagtgatttcagggttacttgtccacaacaactgatcgggtatcagaaaatagggcatatttgtttcagccgagagacccctgggggtctagttttaaggcgagtaggcctattgagatgcacataagtaccttttttcatcttatcaccccgcctagtgactttgcaagcattgcagggtgtaggttagccaattaatatcatccttttttgtgaataaatttgtctttggatccactcaaaccaaaattctaagagtttggtccttggataggttcattgtgaaggcaagctaggaaaaaaaagatcaccataattctatcaattcaccaccagttgcccgttggaagcattttaagtcttggtaatgaaaagtcagccaagcaaaagtggcagttggctataaacattcacccagggagaagaaggccatatgtggaataaccaggcaacacagttatcggtgtagatagcccaataaggcagtcatagacattttcccgtttaaatcagcttttatcattttacccattctgcacaccaaccaagcactactcaagtttcctttattaagagaagtgatcttcagcaaaatttcttgtttcaacagcaagtaactacgggtcactcataaccttctaatcctctattcaagtttcctttattaagttcagagaaaaaaagtatatgaactatgagttgtttcgttaagtatggcaaactaaattagcatccaatcaaaatgataaaagcatgctatacatgacatcaaacaacaatgagaagctgtacacaataatctccctcgctcaatttatccacgctatcgctgctactgtacctttgatgagagagacactgggaagagaactcacaggttgaggtttttggatttatagcagctgccggtcttgtacctttcctgcttctccgtcgcgcaggaaaaaggacaaaaggccaccgacttcttctcagattcattgttcgcctcctctgggagaagtggcagcggcaagggtggatgtgtcggcagcagagcggaccaggatggaaggattggcggcagagaggtccgggacggcggcatcagcagtggagggcccaaggggaacactgggccatcgattacggtggagacggagatggagcagccccgccagctgaagggcagaccaccacggctgggaaggatgcaagaagtgtcgtccgcggcgggaggagttgatttccggcgattccgcggctgtagagaatgcgagaagtgtcgtccgtgggcgagactgcgagaggaatcgatttctggtgattccgcggctggaggatgtgatttgcaacgggagaatgcgatttccggggagaggaggcgtgcggcagactgcggatgggggatgtgcgcagtggttggaggatgtgtcgtccgggaggaataggcggcagcgttattatcgtgagaggactacgtgatgcagcgatgtggtggtgaggcatcacggcagggtcagcgcgtacgcgcgtggctgcggtgggtcccgggcggtagtccagcggaagggggaacacgtgagaggaggggcggcagcgagtagcacagcggcggcggtggcatagcgcggggaaaggggggcagagtaatcaggtcgggcacgtggaaagagcggtggtgcgggcgtggatagcgcgaggtcgcccaagatggattcagtgaaagatttcagcggattaatggataagattattttacctggtgaatggatggatgagatgagttgggatgatttggcatgtaggattggagggatgcaactcctcctttttatattagtatagatatcaacaataatgagatggcctattttagtaactccctgttacacatttgccatgaaaatagtgcaacgttagagcaaaattgcttgacaaacacttgaaaagctgaaagcaagagatttgtctttcagtgggattgaagataactccactgtctaaaaaaagaactatgatatctgttgataagcagatgaactccactatctatacaatggttttcctacaaccacaaggacttcatatgtgctcttctcacattgcaatcgaaataacatttatatgatcacaagaggaaaaatacctgggaatgaaacttcagagagttcttgtcgacgaacaaaagaccatgcagatcgatcactttactttagatctttgaataatcacgcacctttttgcgccactggacattttatatacataaaaaaccttatttatgataaaccagttcaagtatgaactaaattaatttttcaacttcagtagacagtgagttacctcaagaacatatgcttgtcttgagggctattatagcagaataagtaccataagtatgaactaaattaaattttcaactttagtagacaatgagttacctcagaatatatgcttgtcttgagggctattatagttgaataagtaccatgaactgcaaaaaatactaaaactttgttcaaaaccaacaactgcaaccattgcaccatggagcccattctccaacgaaaggagagacaacagtgaataactaacctacagtggccataaaagattatcaagtacaacctttgccaagatgtagaaatggtatactaatttattttatggaaaaagaaacccaacatgtcttcaacatgtcttcctaggcactctgacattttgtctaaactgtgcatgtttctccatagctagctatgggaggtccatatcttctctcagaattcatgaaagtgcatatctgaagacatttgtttctttaatgctcaagcacatgtattcataggaacaactcacaacaattgagatatcagcttcattaacaaatttttttgatacaacagttgcccaaattgagacacaaagaagtacctgcaatacacaacattagctcaggaggcccttgtcctgattggcttcctcttaattcctgaagcccgtttgtggatgtcatgctatattcaaatttccagcacccatggaacttgctggatatttcactcaagaatccgcatggccacatcaagccccaaatgcattttcagatacaaaatatatgtcagtccatagggacagaactatagaggaaaaaataatttgtaaatttgcaaagtagaacctgatgccatgaagattccatcaaccatgcaattaacctacttataggaaatcaacctccaacatggatacaggaacatgtatccagcagtatcgtctttagtccagaggcattgcgagggatggtatgatgttgccattgcaccctgctatgagatcgccttctcctgcctacaacctgagaccactgaccagtggagcaagagaggatggatctaaaaaactaaatattgtttccattagcagactaacgaacgaaagcttatcttcggcgaaaggggggaaccacctcggcggcggcggcttgcagcagcggtggagtgcggcggtggctggggatgacctcggctcaggcggggcagtagcggctggtgacgaccttggctccggcggggggcagcagcggctggtgacggcctcgactccggcgggggcagcggtggcggggacacgcgaggaggagcgagtagtggacggcggaatcatctcgcgggggcggagtaaacacgcggtggagggagtgcaggcagaaatcgcggtggagggagtggaatcggtgagcggtagccggtagggacggttgtgatgcgtgcaacgtggatggacggtagggattgatagatgtgatttggcctataggattggaggggtacaactcctttttatattagtaagtataggtaaaggaagcttttattcagatcaagataattatatttcttaccagctactaattcttcctatgttttcagatgggaaggagattatgcaatgcagtggtatcgtggtcgattggaacaagaccagcaggttggcaacaatcgtaacttgctctgcagccgtgtgctttgatggtgcactagtccatcccaaccccaaggtatgcagaaaacaaacctagctggattgattaatggtaacacttggactatgaaagttctctgtaaattccccttcaaatcttaataatgtttggtcagcctcttccaagactgaaaattaattaacataggatagatatgtttgcacaatagcattccagaattaacccttgttctttagatagctatgggtcctacataaactagttgacaccccgcgggttgcggtgggcacactataaaattttcgaagtgcataaaattgatgcaaattttggtcatcgaatcagcatatgaaaaaatagagatttacagtgttgagatagaaattgtgtctaaatgttcgtttttcaattaggaaagcaaccccaattctcatggttcctgacattctagcaataccgggctggtcgatttgctggatggctgcgaagatatgttaggtgtaaaatcaggattaatctcatggcaatatgattaattgaaaagttcaaaagtttatagaacatataaaaagttatctcaccttcagcagttatcccaaacgaaccttaatggttgccttcatctgataatctaggctacatgcaggccttatttatagcaactccaatctgtattccaagaaatcaatatattttgaaactgaattcatactgaaatttgtgtttcgaggtcggtagagataattgacatttgaaggtgaatataaaaactgtacaataggaaagctaaggccaatactgcttctttactgaaacaaatctacagcaagcaatgaaagagagaggaagagtgtttattttttttaccacttcattaaggaatgatatataccaattcgatgaattgttgcaaatcctattggacggatacctgtgaaaataggtagaaaccaattgattaactaatagtccttgtcatatatcaggatgaagaaaaatctagcaaaatcaaccacctgattggaacatgtacaaagcaaaaagaaaacgattagtgagggttaggagcgtgcttttttttttccccacaaggaccgctgtgggtatggagcgtgggcgaggtggggctgcgccaatggaaaacattgatggggagctggcccaagatatcaacaccgttgatctggaaccatgaagaccaatccaaatgtcgagaattaacgatgacgtggtgcaacgtattgcaagctttatagtattaattgctatagtgggtactaactatataggaagaagggatggctagcatattatgactcggaattaagagtatatttgcataggaagcatgagaggggatagtacatatgtttattccgtgttcttattatctttttctgaattgtttaattttgtcttttcattcttattgtttcaactgtgctattcctgttcataatctttattggatcacatgattcaaaaccatgtgatcatctctttttgcagttgctcgtacatttgcctaataggtctaccgcagaaggacaattgcttttcttcaatgcacactaccgtattgcattgttggaggccttggtggactttccattggagcctgctaattttggctctagtccaaaatttggacaaaaggtgtttaccttggcaagggacaagaagtcatccttctttgctaggtctgggacagtcctgttgcaggatccaccattttttttgaagtacaaatactggttatctctcagctctgcaattgaactggtataaggattattgttgttgcagttttttatccattcccactttcttgcctatttagtttgtgttatttctttgatgcagtgtggcactggaggacctgcgattgatgagcgtggcgatgttgcagggatgacattcggtcgtttgccaaatccggatgtcctctctatctctatcctgcagacatgcattgacatgtggaggagattcaggttcattaacaatctcttttattattgtattgtttctactattcttttgatgtctataaaattgtggcatgttgggtaggttaacttcaaaatttagataatatttagacatatgtttatgttggtattgaaaacatataatattacaatcctaacacgagtgtttaatcagcggcgaagccatagccccctgccccccgcattagcagtggcacatgtcaatctaaggatttaatggatattacaagtctcgtgtaacattattttacaataaaatatctttcttaaactgaaatcttcttgctgtagcagtgacggcgtcatcagtgtctcgccaaaactctgaccatgtcatacgatgaatctctagagaaatcttggcaccccaaccttcaaatcgtggctttacctctgtacagtggcggacccaggatcgaaatcctgggtgtgcccacgtcaacctcaagtgcaaaaatcaatgtccagtgcttataaataccatgtgatctcaagagcaaaaagtcaaagttttagtgcacataaactccctattttccttcgcatatagttgattggttcaacttgatctctccctacaaataatagaaaacacaccttcaatttaaactctcactaattttagtttttaatttttcaatcaatctctgtcacctccagagagaagagagaagatatcagtatgataagagagattgagagaaaaaaaaaagtaagaatgtaaactaggacggctggacagggaagtcctagccacttcgctggtcgctatgagcctgcgacttctgccaacttcccatgtagccatggcccatgacagaggttcttgggctttgatttctgccagcttgtttgaggcaatgaagcaaccatccaatgtctaggtccattgtgcatactactcgctattttttccccaaaaaatgtgggtataccggtgtctccactcctgcccctgcctgtgtactatttcactgtcctatatgcatagaaatattcaatgcctggctctttaatattagctacttatgtttaaactttagttgttatacttggtatactttgtaagaaattccacaaattcttgacggacacataggtgtggcatataatattagcgaattgtctttgtctttaatagtctgtgtagctctcttttatatcttgcagtgtagttttatgtgttcttatcaaacattttaatatcttcaaaataattccttgtcaaaatttgaagttagtgaatttggcttatttcagtcgtgttgctcgcccctttcttgatatggacttgatagcctttgagacgttggatattacacaccaggaggagattgaatcggaacatggcattaccgatggtttcatcgtggacttggtatagatatattcgttttacttcagttttcagaaatatatatttaaattattttgaactttttaggtgtgcgatgattccactgctgggagacttggtatttccaggggtgatgtcattgtttcatacaatggacttcgtgacttcactctgcatacggtacaaagtttatgattgttttcttagttttgaaaggtgcaaaacagtattgcttatatagtgaaatttttataagcagtttgaggagtaccttctcaatcttggctggggttttcttgagagtacagatccgagctggacgatcaatttagaggtatatttcatagtcttcttggtgttgagaatattgaaactaaccactgaaaatataatatatatttttttcttgtagcttgagatatatgatcctgttagaggtactatcagaggtgttaccttccctctgggattttctgatatttgcgaggatgtatgtaacattttatcttagtttattgttttatgtgatatatttttttaaaaaataaactgacaaacttgtgaaaattttaggtccttgtactgccatgagacagctgcggcataaatcgtcaaagcaatgtggctaactgtcgctatgccatatgcctttttttgtggcaattgttttgtgatgtcatatattatcttttttttttctggtgagatctgtaaccagaagaacatattgtgatattgatcctttttttgttatgcggtagggctgtttgtgacttgcaaggtttctggtggccacgattacaaaactgaaaaaagatgaaacatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0160600, RefSeq:Os05g0160600