Os05g0161400

From RiceWiki
Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0161400| Description = Peptidase, trypsin-like serine and cysteine domain containing protein| Version = NM_001061260.1 GI:115462250 GeneID:4...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0161400

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001061260.1 GI:115462250 GeneID:4337889

Length

4442 bp

Definition

Oryza sativa Japonica Group Os05g0161400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3592687..3597128

Sequence Coding Region

3593026..3593050,3593405..3593548,3593643..3593770,3594065..3594340,3594518..3594648
,3595234..3595351,3595422..3595514,3596091..3596165,3596255..3596332
,3596761..3596775

Expression

GEO Profiles:Os05g0161400

Genome Context

<gbrowseImage1> name=NC_008398:3592687..3597128 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3592687..3597128 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagactctccaaaatcccacttcctccgggtactgtgattccttgcactcgtaggaggaagccaaaagacatttacaccgccagggacgttgcaagcacgccggacaagctcatgatcaggaaggctgcacgctcggttgttgccattgagaccacctattctgatgggaaaatcattgctgtattttctggcatcgttgtcagttggaatgagacaactaggtctgcaacaattgtaacttgttctgaagctgtgtgcgatgatggtgcattgatcgaccccaaacccaaggtgcttgtgcacttgccaaacaataccattctagatggacagttgctgtttttcaatgaccactaccgcattatgttgttggaggtcgtgtcagacactccattgcagcctgccaattttggttctaccccaaaatttggacaagatgtgtttgctttgtcaagggattatgaatcatcaatgcacgctaggcgtggcacagtcttgtggcaggaaccaccaaacgttttggagtacatgtactactgtctgtctctcagttgtcaactagccccgtgtggcagtggaggatcggtgattgaccagcacggtgatgttgttggaatggcaattggtgctcctccgaatcctgatattcttcccatttcaattgtgcaaacatgcattgaaatgtggacaaagttcagtcgtattgctcgtccagtgcttaatatggagttaagagcttttgagctaatagaagtttcccatcaagaggagatagaacttgatcacaatattaatgatggcttcatcgtagctgtggtttatgatgattctactgctgtgaggctaggcatttctcagggagacataattctttcctacaatggattgcacgatttcactctacacaagcttgaagagttccttctctctcttggctgggaattacttgcaagtggcgatccgagttggaatgtaggtttagagcttgtggtatatgatgcagttagacatgctactagatctattacctatccattggagttttctgatgcttctgagcgggttcttcctccgtga</cdnaseq>

Protein Sequence

<aaseq>MERLSKIPLPPGTVIPCTRRRKPKDIYTARDVASTPDKLMIRKA ARSVVAIETTYSDGKIIAVFSGIVVSWNETTRSATIVTCSEAVCDDGALIDPKPKVLV HLPNNTILDGQLLFFNDHYRIMLLEVVSDTPLQPANFGSTPKFGQDVFALSRDYESSM HARRGTVLWQEPPNVLEYMYYCLSLSCQLAPCGSGGSVIDQHGDVVGMAIGAPPNPDI LPISIVQTCIEMWTKFSRIARPVLNMELRAFELIEVSHQEEIELDHNINDGFIVAVVY DDSTAVRLGISQGDIILSYNGLHDFTLHKLEEFLLSLGWELLASGDPSWNVGLELVVY DAVRHATRSITYPLEFSDASERVLPP</aaseq>

Gene Sequence

<dnaseqindica>340..364#719..862#957..1084#1379..1654#1832..1962#2548..2665#2736..2828#3405..3479#3569..3646#4075..4089#ctcgtctcgtgacttcactcgactcgtctctccccaatcccaccgactaggcctaagacggcggcggcgggagcttccccatcaaccggtgatccgtcgacgacagagggtggaaggcttacccgccttcgatcaaggctgctagggctggagacgcctgccgctgaagacgtcgggagagtgggggggccgtctcggaagaagcgcaagagggtgcctccggcggcggtggaggaggcagcggcggcaggagggggtggagtccggcggtcgcctcgtgtcttcccgacgtaccccacgtctggcgaagcgagtgatgttaatcgttggattttggagatggagagactctccaaaatcccacgttagtattcaattcattattatcttccttctctctcgccgttaattatcagatatgaagtagtatactccctccgtttctaaatgtttgacgccggtgattttttttaaacatgtttgatcattcgtcacaaaatttaagtaattattaattctttttctatcatttgattcattgttaaatatacttgtatgcatacatatagttttacatatttcataaatatttttaataagttgatcgatcaaacatgtgtgctaaaaagtcaacggtgtcaaacatttagaaacggagggaggatatgatatgagcagaagaaggggaaaaaaactaacttgtgctctattccttcagttcctccgggtactgtgattccttgcactcgtaggaggaagccaaaagacatttacaccgccagggacgttgcaagcacgccggacaagctcatgatcaggaaggctgcacgctcggttgttgccattgagaccacctattctggttaaaagatgatctcactactcacaatcctcaactgcaatctatctcctctaattaattaccagcagctagcttgcatatggtttgttttcagatgggaaaatcattgctgtattttctggcatcgttgtcagttggaatgagacaactaggtctgcaacaattgtaacttgttctgaagctgtgtgcgatgatggtgcattgatcgaccccaaacccaaggtaactaagccacggcccaacctcgggggttaatgatgatcatggctttgactctatgacaatttattcaatgtacctacctaatggtagggaattatagatttgcgcatgcatgcagtaggaggttatagaggttctattgtagaattaacccaccctctcgacttccctttcttgcattgttcgattccgtcttttcattcctgttgctttagatgtgctattctagctgataatcctgcctattttgtatatgatacaaaaccatataataatcaaatctcatattttcaggtgcttgtgcacttgccaaacaataccattctagatggacagttgctgtttttcaatgaccactaccgcattatgttgttggaggtcgtgtcagacactccattgcagcctgccaattttggttctaccccaaaatttggacaagatgtgtttgctttgtcaagggattatgaatcatcaatgcacgctaggcgtggcacagtcttgtggcaggaaccaccaaacgttttggagtacatgtactactgtctgtctctcagttgtcaactagccccggtaaatagtatattgttattgtactccctccggcccataatgtagcaacctaggacggcccataatagtaggttgtgacccatcctaggttgctacattatgggacggagggagtagcttctttgattcttctctgctttgttgcttgtttaacttgctgttgtttccctgatgcagtgtggcagtggaggatcggtgattgaccagcacggtgatgttgttggaatggcaattggtgctcctccgaatcctgatattcttcccatttcaattgtgcaaacatgcattgaaatgtggacaaagttcaggttcattaacatataatatctgaatcagtactagtagtagtttttccatagctagtaagcacggtataggccagtaaaacttttccttctccaataagctagacctgctagtaagttaagtttgtttttcccttgtcagtaagctagaagtaccttggtcagtaagtcaagtagtcttatgcagtaagctgtcttagcgaacaagcctagtagttgctgcctccagatgtactataaatatgtatgcctatatgcaatgcaagctaagcttttcagcaacacaaatcagagtttcagcttgactatagtgtgtagttcagaaggtcctactaataattggtattagagctaggtgaaaggtgtgtgtgagagagatggcagaagcagcagctgctgctggatattgatctattcttacaggagtgctctctttgtttgtgtttataggttgttttttttttctcttatacatatatatgtatatatacatacattgctaccttgtgtaaacttagacatttaatgacgctacaattatctttagttagatttttgtgattgattttttgttcttgtttattgtagtcgtattgctcgtccagtgcttaatatggagttaagagcttttgagctaatagaagtttcccatcaagaggagatagaacttgatcacaatattaatgatggcttcatcgtagctgtggtatatcaataaatcaatagtcatatgctttattatacgcagaacattttaattactttgatgtatttaggtttatgatgattctactgctgtgaggctaggcatttctcagggagacataattctttcctacaatggattgcacgatttcactctacacaaggtaaagaaaaatgttctgaacatttttatattagagtaaaatgcaccagcggtccttaaacttgtcaggaggtttcacttaggtccacgaatttgcaaagcgcacatcgaggtccctaaacttggtttattgtatcatcccggtccaaagccgtgtttgaccgtggtcttgcctacgtggcacgccacgtggacgatgacatagaaatttttttattttttctcccttcttcctttttttttctctttcttccttgtcgaaaagacgaaaatgcctcgtacacgtcatcgtccatgtcatcgtattttcataaaagagaaaaaagaaggaagaagggagaaaaaaatccatgtcatcgtccacgtggcgtgccacgtaggcaagaccacggtcaaacgcggctttggaccgggatgatacaataaaccaagtttagggacctcgatgtgcactttgcaagttcgtggacctaagtgaaacctcctgacaagtttaaggaccgttggtgcattttactctttatattatttgaagctaaaaaatctatgtcatatgttgtcaactttttgtaagtagcttgaagagttccttctctctcttggctgggaattacttgcaagtggcgatccgagttggaatgtaggtttagaggtatacttggatggtttatgcaatattaaaatgcttaatttgatatatacatttgaaactagcaaaagcatgttgattttttcttgcagcttgtggtatatgatgcagttagacatgctactagatctattacctatccattggagttttctgatgcttctgagcgggtatgtttttttagcattttctatattgcctattatgtgtggtttatggtatttatctttgtttagctaagcttagtccttaatctgaatttttggtaatgttttgtggtgttacttttccatttttaggattctagctagttttatttttaattctatagattcacatcatagcaaaatataagtgccacagagaacattcaaacatccacaaataggttgcaatgccctatatacccattttgtcgaaagattcactgcacgcttatggtgctcttgctgcatcttccatatgtgatgaaaattttatctttgtttttagaaattcataattccaagacttctcttaataagaaatgtttttagaaattcatagttccaagacttctcttaataagaaataagctgacaaacacctggaattttaggttcttcctccgtgaggtattatggataaaagagtctgtcaagcgatgtgaccaactgctactatgcctgtgcttgtttttttggctgtggtaaggaatttgaaatgtcagctaatgtccttttgattgaccatatctagtactctggtaggtccgtgacttcgtaaattttttggtgagatctgtaaggatattgtgatgcagccttttctttggctgtggtagatattaggtactcttcttatctagtggggttgtggcatagtaaattttttggtgagaactgaaacagaaatggatatattgtgaagttggtggctaggattacagaatcaaaaggggttgtggcatagtaaatttttggtgag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0161400, RefSeq:Os05g0161400