Os03g0861700

From RiceWiki
Revision as of 19:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0861700

Description

Rhodanese-like domain containing protein

Version

NM_001058517.1 GI:115456762 GeneID:4334877

Length

5116 bp

Definition

Oryza sativa Japonica Group Os03g0861700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37227211..37232326

Sequence Coding Region

37227618..37227774,37227919..37228203,37228313..37228416,37228527..37228624,37229642..37229775
,37231054..37231181,37231849..37231902,37232025..37232282

Expression

GEO Profiles:Os03g0861700

Genome Context

<gbrowseImage1> name=NC_008396:37227211..37232326 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37227211..37232326 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggcggccgccgtccaccgcttccttggcgtatttcccgccccgtcgacgcccacgcctccgcctcgacaactatcgcctcgcccccatcacattcctccttccctcgtccgatgttgttcctcgtcccccgtatgcgccgccacagttgcagttgcacaaccccaagagttcgtcgtcgtcaccttctataagttcgtctccatcgacgacccccgcgccgaggtgtccaggcacctccacttcctccagggccgcgacatacatggccgcatttacatgaacgagcagggaatcaatgcccagtacagtggtccacataaagatgcggtagcatatgcagactggcttagaaaagaccatcgatttcgtgatctacttgtccaaacttcaccatcgttatgtggccatgcttttcctcgcttgaaactgcgcatgcgtgctacaccattgactccatcagagtggagggaaagacttgaagctagaaaatgccttgatgtgtcatcgagtgaagcagctggagatagctctggaaggaggcttttgctcctcgatgtcaggaatgattatgaatgggatattggacattttcaaggagctcagcgacctaatgtggactgcttcaggagcacatcctttgggctctcagagtcagagcaggagatggattcttcagatcctctaaatggtatagacaaagaaaatacagatatattaatgtactgcactggtggcataagatgtgatgtgtattcaacaattcttaggaagaagggcttccggaacctgtatacattgaagggaggagtgtccaattatctgaaggaggaggggtctgcaggatgggtggggaatttgttcgtgtttgatggacggctctccctgccaccggcaacgtacaagcctggagcaggtgatgatgatgatgaggaggaggaggaggggagaaacagaagcagttcagagctggggagatgctatgcatgtgggtcagaggtggttgagttgaggcaccggaactgcgcaaacatcgactgcaaccggctttacctgtgctgcgggcgatgcgtggaggagctgagaggatgctgcggtgagggctgcaccgccgcgcctcgcctgcgaccgctgctgccatcacaccagagataccacaagtggcatctctaccgccatttggacctgggggcaccatcatctccatcctag</cdnaseq>

Protein Sequence

<aaseq>MAMAAAVHRFLGVFPAPSTPTPPPRQLSPRPHHIPPSLVRCCSS SPVCAATVAVAQPQEFVVVTFYKFVSIDDPRAEVSRHLHFLQGRDIHGRIYMNEQGIN AQYSGPHKDAVAYADWLRKDHRFRDLLVQTSPSLCGHAFPRLKLRMRATPLTPSEWRE RLEARKCLDVSSSEAAGDSSGRRLLLLDVRNDYEWDIGHFQGAQRPNVDCFRSTSFGL SESEQEMDSSDPLNGIDKENTDILMYCTGGIRCDVYSTILRKKGFRNLYTLKGGVSNY LKEEGSAGWVGNLFVFDGRLSLPPATYKPGAGDDDDEEEEEGRNRSSSELGRCYACGS EVVELRHRNCANIDCNRLYLCCGRCVEELRGCCGEGCTAAPRLRPLLPSHQRYHKWHL YRHLDLGAPSSPS</aaseq>

Gene Sequence

<dnaseqindica>4553..4709#4124..4408#3911..4014#3703..3800#2552..2685#1146..1273#425..478#45..302#agaatagaaggggaggaggagagacgagaggagtggttgtggccatggccatggcggccgccgtccaccgcttccttggcgtatttcccgccccgtcgacgcccacgcctccgcctcgacaactatcgcctcgcccccatcacattcctccttccctcgtccgatgttgttcctcgtcccccgtatgcgccgccacagttgcagttgcacaaccccaagagttcgtcgtcgtcaccttctataagttcgtctccatcgacgacccccgcgccgaggtgtccaggcacctccacttcctccaggttcctattccttctctccctcttcctcttccctcttctcctctatgtgaaattgttgcagctaacaaggctcgatttgattgtaccaagaatttatatgtactcgtctctctctctctcagggccgcgacatacatggccgcatttacatgaacgagcagggaatcaatgcccaggtaaaacaagcttctgtttcatttctttctttcttttcttatatcgctctagtgcttccaccaacatggagtactacggtatttaccatgtcttttatcattatatgacaacttgactgagactggtgacatggtaacatgaatgaatgatgattgtgtttagtaacaagcacatgtgttgcttaaggtccggcttgatttagattattgccgtggactctctactcgagtatagtgataaattaaatattttataaaataaacttaactaataccttaaaataactggtataagcaatgccgtagaagaaattttttaataaacattacttttagatttttagaagcgtggagcaaataatatgtttcaataaccaggtgaataagctaaaaagtagattaacaacaaagtcaaccacaactgtgaagatgtacatatgtttctacaataatatcactgccttttaccttgcattttctcttttaagcagcaatgaataaattaacatgtatgaagaagaaaacctgaaaatctttaaaatgtttattttttagcatggctagccataatatgaatgtgctgagccctgcattacatgtacaaattattacataatatgattgtttttatatcaatttctactctaatttcttcctcttgtcacagtacagtggtccacataaagatgcggtagcatatgcagactggcttagaaaagaccatcgatttcgtgatctacttgtccaaacttcaccatcgttatgtggccatgcttttcctcgcttgaaactgcggtacaaaccatcgcttgttcaggtaagccatgctttcattctactgcacaggggaaacagaagctaatagcttacctggatacgctgatctgctttctatattgaatttctcaagtgtctcaatgaactgaagattgtcatacaggaaaaaatattcttctactaacctgctaaacttctaaatctaactgaatgtagatgattttttttacatgattggaaatacaatgtgtataaaaaaaataatgaaactgtttctttcaagggtctagatactgagcaaataatcagacgtgcgagtttctagagcttctcctggatatacattgatatattttaaaatggcctagaccttctcctgatgctatatggtggcaaccttatgcctccgagctccttttgctgctgttacatttgaatgaaaaaataacttgtctatcgtactgattcctgctctggaagagatgtttattttgctgtgaaccttaactgggtttcttatattctttgggctggctgggtgcctaacggcagaacctgggaatgtaattcatttccattatctaaaaacaataattctcttggtataacaaagctggaaacaattcttttggattttgagtggagcgcaggataaggatttggtaagaagagtctatttatggaaatggcatcctgtctttcctcagtaacggagtgagtagctaccccaacttctgttccagttccattactaggcaggagtccaaagtaaatcttcccaactccacgactgcatcttccatgaagatcaggagacccctcacattctgctgcccatgagacttgcctttgtgcaccccttcaactaaactctgatctgcggtgtaaatattattaatcaattgtccactgcctggaaatttggagcttttacaagttgatgtcttagcatattctagagcaattaccctagctcttttcaacatttcgaaagtgcagtatacaccaatacatgtttttcaaatgcagtgtttcaagttttctttttggtgacagcgcaaggtccattcatgtagttgttccatcatttaagtctcttcagtttgtatttatctcggtctgtttggtggaggtgcgaactgaaaagatctgaactttttatctatactgtactaggacattacagtttgttagaaaataatccaatttactatatgaagtctctagacatcttatttcaaataaaaactcccagttggaaggaggttgttcacatcttcctttggtggaccctagcatgcgtgctacaccattgactccatcagagtggagggaaagacttgaagctagaaaatgccttgatgtgtcatcgagtgaagcagctggagatagctctggaaggaggcttttgctcctcgatgtcaggaatggtaaagtatatttttatttaatacaaacttgtatagtttagcagctgtttcctaagtactgccaaatcaacaagtgatgaatagagataagcatatttttacggctgaaaatagctattagtgctgttgtgttaatagaaaaaaaagggtttgcataacaggaggcaaaaccataaatccttgtaattggtagagtggtgctgttatgatctgtggtgtatatttaccatggctagagagagtcggagactattgagagaaaaatttccaatgtcggaagtatgtctagattatagtgtagattgaccgtatatatgtagagttgatataattcccttttagagaaaagggtgtgttttcttatacaaatttataagaaaaaactgtattttaagaataaatataggagctgtacagaaaatataactatattttcaacgaattaaatttaaaaatatacctcttttttcattattttgcgtttatatacctatgtggcgaaaatctgcacaaatatacatctttcacagtgtggtttcgcgggaccgagacggtcccgcactaccattccgcgggaccggcggtcccgtagcccagccatgcggcaccgtctcgctctcgcagcccgaaagagcggtatcgtgtggcatgcgggctgacgcaaggtaccgcgccagcggtaccgccagccagccgcgcgtgaccgctgcatggatcggtcacggatcagctgcatgcatctgcatgcatccaaccgtcccgcgggactgccgatcccgcgttttggacgggtatatttacgcaaattctccacatacaggtatataaatataaattattgtaaaaataagtatattcgtaatttttttcctattttcaactacaaacataatgtaggtttgtttttcatatatcacaagctcgatggatctgcctgttctatcgggtcactcttttgattttggactggaatttatgtttttctacttccctttttttaaaaaaatttcttgtcagattatgaatgggatattggacattttcaaggagctcagcgacctaatgtggactgcttcaggagcacatcctttgggctctcagagtcagagcaggaggtaagactagctactgtgatgtatgccacagtagagtttgttagttattggactagtttcggctggacactcctacttggtactgagtgtgtaactgtgtgtgtatgcagatggattcttcagatcctctaaatggtatagacaaagaaaatacagatatattaatgtactgcactggtggcataagatgtgatgtgtattcaacaattcttaggtaagcagatatcgacattctcactttgtggaatggaaatagtatgcatctggcgttctaataagactttctttcgagtctgtttcattcccgtacactatgttcccaggaagaagggcttccggaacctgtatacattgaagggaggagtgtccaattatctgaaggaggaggggtctgcaggatgggtggggaatttgttcgtgtttgatggacggctctccctgccaccggcaacgtacaagcctggagcaggtgatgatgatgatgaggaggaggaggaggggagaaacagaagcagttcagagctggggagatgctatgcatgtgggtcagaggtggttgagttgaggcaccggaactgcgcaaacatcgactgcaaccggctttacctgtatgttcgttcgtcgtctctgctaatgccagcaattttttctttctttctttctttcattcttacagtagatattagcagtaatgtgtataaaacgaacgaacgagtgatgaactgaagtgaagtgattatcctattaattaggtgctgcgggcgatgcgtggaggagctgagaggatgctgcggtgagggctgcaccgccgcgcctcgcctgcgaccgctgctgccatcacaccagagataccacaagtggcatctctaccgccatttggacctgggggcaccatcatctccatcctagcttactagtatagtactccatgctgccatgcatttggatggattggattggattttcctgttgtttcctgcacgcttaactgtgcgtgtagtctcatctgtcatgccccaagtctcaaatctgcctgccttctttcagcttcagttggtaccaaagctgactcacctccacgacgaccttctcttaattttcctcttggccagcctcctctttactttcggtggattcctatgtatagtccctttattgattatgtatattttgattagggacacgtctacacggcgaccacttcatcccaagtgtaaaccctccttttcagcttctaaaaatagcaaaagaagcactttgcatggatgtaccccgactgaccgataccattggaaataagggtatgaaaacagtat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0861700, RefSeq:Os03g0861700