Os05g0161901

From RiceWiki
Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0161901| Description = Hypothetical protein| Version = NM_001187301.1 GI:297723732 GeneID:9270001| Length = 2996 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0161901

Description

Hypothetical protein

Version

NM_001187301.1 GI:297723732 GeneID:9270001

Length

2996 bp

Definition

Oryza sativa Japonica Group Os05g0161901, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3621104..3624099

Sequence Coding Region

3621104..3621209,3621314..3621453,3621562..3621634,3621729..3621790,3623639..3623755
,3624046..3624099

Expression

GEO Profiles:Os05g0161901

Genome Context

<gbrowseImage1> name=NC_008398:3621104..3624099 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3621104..3624099 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacctccggggctcgctgagaaatgcaaacggacgttggatgatccatgccttggaagaaggttggctgatgggcgaagtgatcactgcctcactggccaagaggacggtgtgaccaattcagcaaatgatagatcgtcttcaatgtggaaatgggagtggatggacgatcagacgatgtggagtgagtgccatcagcattctgcagtctcttgcagtgttcttattgcaggcctttggcatgaagctagtggcgccatgggtcatggcaagctataccaatggaacaaggttgcaagaactacttgcaagctagcacctaatcactggctcaagccacattcggcatacggccataattcagctactccgatgaatgcctggataccaagaacatttggcaccaatgcatatgctggaccatgcagctctatttttcagactaaacagacacaagatggtgacagtatcaagcaccaccatatacatgatcagactgacaagcacaagatggtgacagtatcaaccaccaacacctacatcaggtaa</cdnaseq>

Protein Sequence

<aaseq>MPPPGLAEKCKRTLDDPCLGRRLADGRSDHCLTGQEDGVTNSAN DRSSSMWKWEWMDDQTMWSECHQHSAVSCSVLIAGLWHEASGAMGHGKLYQWNKVART TCKLAPNHWLKPHSAYGHNSATPMNAWIPRTFGTNAYAGPCSSIFQTKQTQDGDSIKH HHIHDQTDKHKMVTVSTTNTYIR</aaseq>

Gene Sequence

<dnaseqindica>1..106#211..350#459..531#626..687#2536..2652#2943..2996#atgccacctccggggctcgctgagaaatgcaaacggacgttggatgatccatgccttggaagaaggttggctgatgggcgaagtgatcactgcctcactggccaaggtaacactgtgtttgcaggcggtgtatgattgctctttttcgtgtgatccgcacagtcgcagagttcaggccttgttcagctgcgattatttattggttttcagaggacggtgtgaccaattcagcaaatgatagatcgtcttcaatgtggaaatgggagtggatggacgatcagacgatgtggagtgagtgccatcagcattctgcagtctcttgcagtgttcttattgcaggcctttggcatgtcagtaatctgggccctgtctgtcttcaatggcttggagggagatgacttctttcctaatgagtgaggacctaatttttttcatgttgatggcatggctaaagccaggaagctagtggcgccatgggtcatggcaagctataccaatggaacaaggttgcaagaactacttgcaagctaggtattattattaatgacaccttagtggatgtgtcttgcaacttgcagcacgatcatgtttgatcaaaactctgtgctatgatgctggaaatcagcacctaatcactggctcaagccacattcggcatacggccataattcagctactccgatgaatgtaaatgttgctgtttctctagtctctataaaatttgcagaagccaagattggtaggaaaattattgtgtactgctgaagaggaaaagctcaagcaaaattctgttcttatcagtcatcccccccaagcccagatgcagcaaagaagaacaaacttcgtgtagtcctcaagtcatacaatccttcatgcagttagtgtgctgatgctgtgatgatcaatgctaaatagataaaattcacatctccactttttgtaaggtatgatttttcacctctgattctgcatgtgttttagttggatccatccagttatacttgatgtttctttcatatttcaactgttttaaatctttatataccacagtaaatgtcagaggtaaggcagaaaaggggaagcactgaaagttgcgaataacatacttacctgtagagcaaaattttcttgttgggtactgcacaaagaacattataaaccttatccatcagtaaggcttgtggagaaagtaagcatatggggcaaggaacagtaaataaaaggaaaaggaccctttcaatcacaagaggagaaataaattttccaagatcatgaatgaaatgtttgtttatttaattcctgaacaacaaacaagataaccttaagcaggcatcatcggtgttgacatcattctgttttacctttggtagtgacaataactaacaaaaagcaaagttattcaatccagaatcttttgataggaactgaagaactactttgtgtttgctgtcaaaaaaaaaaaactacgttgcgctatagttgacttaaattttgttatccatgttcattgattgttccgttgcaattggactactggtttaaaaacttaacctgaggctaccaaaccacttatgctatcattacacattactgatgagaagcaaacaaagggttagtcatatgaactcgaagatgcttgtttgaccatctgtcgcagttttaactgttattgcattttcttaacatgtaagcataaggactttctaataaatgaaggctgacgtggcagtgactaacagcataataaaggaaatcaatgcgaaattcatcgattgtttcattgttattaagctgtatttccatgtaagaattaagatgtggaaacattttacaattttacatagtagttcaattagctttcataaaggttaacctccaaaaggagacaccttattacacctaaataaataacttgtaaagattaaaatcaactggagtataggaaggactatatttatatgaaaagtaaaaaaaaacattttgttgtcaaaaacatagaatccgtttgtgctagtggtacaactccaaacccccaagttagcaaaatggttcttaaatactgaaatatcttgagacgtacagtactctgataggtcgattattggatcaatacttaataacgagtagttggattggatcatatgaaggtctagttgcagtgtcgagtattggtattagtattagtagcccgagtcaactggattaaacaaagtaagggttggtgagacactgagactcgtctcaaccatgattgggcgaccttagtctaacagagacttttaatgtacgatgattatattaaacatacacttgttcctaatgccatgtttatcgccataagctgcgggacagacttggataacaagaatatgctttgcatgggaacccttctttttccaagacccttaatatttcactgacaaaggcatgtagcaaagattttgagaaacaatttgtagctctttttttatgaataaatgctgatcaatagccttttttttctttgctaatcatatgtgttcgcaatatgaacaggcctggataccaagaacatttggcaccaatgcatatgctggaccatgcagctctatttttcagactaaacagacacaagatggtgacagtatcaagcaccaccatatacatgatcaggtaacacagaacatgagaacaagatctgatgcctctcgatcattgcacggtaacaagcaattgaagcatcttgtcagctcatcacactaaacatcacactctgctgtctgtacacgcatgcaagcatgcaaaggtttggtaaaacgagttgtagctcttttgttatgagtaaatgctgatcaatagccatttttatttgccaatcttatgtgcaaggttaacaatatgaacaggccccaagaacaacatctgacaccagtgcatgctggatgcaacaatttatttttcagactgacaagcacaagatggtgacagtatcaaccaccaacacctacatcaggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0161901, RefSeq:Os05g0161901