Os05g0162000

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0162000| Description = Similar to Peroxidase (Fragment)| Version = NM_001061263.1 GI:115462256 GeneID:4337892| Length = 2106 bp| Definitio...")
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Gene Name

Os05g0162000

Description

Similar to Peroxidase (Fragment)

Version

NM_001061263.1 GI:115462256 GeneID:4337892

Length

2106 bp

Definition

Oryza sativa Japonica Group Os05g0162000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3624009..3626114

Sequence Coding Region

3624244..3624669,3625159..3625599,3625862..3626074

Expression

GEO Profiles:Os05g0162000

Genome Context

<gbrowseImage1> name=NC_008398:3624009..3626114 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3624009..3626114 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctccgcggccatgaagctcgccgtggtggccgcgctcatctcggccgccgccgtgggcgcccgcgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcatacagcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcatgcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacaccgtgccggggtcgacgacgagggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccgcgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgccttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcccgcggggcggcgcgacggccggacctccctcgaggacgacgcgctcaacttcctgccgccgccaacgtccaccgccgccgacctcgtcgccaacttcaccgccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtctcccactgcgactccttcaccaatcgcatctacaacttccccaacacaaccgatggaattgatccgtcgttgagcaaggcgtacgcgttcttgctgaagggcatctgtccgccgaacagcaaccagacgttcccgacgacgaccaccttcatggacatcctgacgccgaccaagttcgacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcgctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacgttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccctgtcaatgtcactgctactgcagctgatgatcaccaccttacttcctcttcctcctcttcttcagatgaagtggctgcaagctaa</cdnaseq>

Protein Sequence

<aaseq>MSSAAMKLAVVAALISAAAVGARACLDVGFYDTTCPTAETLIQQ VVAAAFRNDSGVAPAMIRMHFHDCFVRGCDGSVLIDTVPGSTTRAEKDAAPNNPSLRF FDVIDRAKSAVEAACPGVVSCADVVAFMARDGVVLSGGLGYQVPAGRRDGRTSLEDDA LNFLPPPTSTAADLVANFTAKNLTAEDMVVLSGAHTIGVSHCDSFTNRIYNFPNTTDG IDPSLSKAYAFLLKGICPPNSNQTFPTTTTFMDILTPTKFDNRYYVGLTNNLGLFQSD AALLTDAALKATVNSFVRSEATFRLKFARAMIKMGQIGVLSGTQGEIRLNCRVVNPVN VTATAADDHHLTSSSSSSSDEVAAS</aaseq>

Gene Sequence

<dnaseqindica>1446..1871#516..956#41..253#gtctacgtcgacggcagcttactttgagagccttggtaggatgagctccgcggccatgaagctcgccgtggtggccgcgctcatctcggccgccgccgtgggcgcccgcgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcatacagcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcatgcatttccacgactgcttcgtcagggtaagtactaaagcaccattattagagaaatcattttttgttcgttactcaaaatctacaataatcttggtttaaataggaaccggtctaagttaaaacaccatacggcactttttaaaacgaaagattatttttaatcccgatttaaaagaaggcaagctatgtcagacccctccactcttcttttgcttcatggatttatgtgccaagtgccaactcatcgtcgtcttcgtccatggcggcgcggtgatgatgcgtgcagggctgcgacggctcggtgctgatcgacaccgtgccggggtcgacgacgagggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccgcgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgccttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcccgcggggcggcgcgacggccggacctccctcgaggacgacgcgctcaacttcctgccgccgccaacgtccaccgccgccgacctcgtcgccaacttcaccgccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtctcccactgcgactccttcaccaatcgcatctacaacttccccaacacaaccgatggagtaaaatcttctttaaccaacaactcatcaaagaaatgaaaaaactgaagaacatatgcagaagtggattttcgtccctttggtgacatcctctcattttgtgcatgtcgtttaaaaaattataaaaaaatttaaaaaatttgtgaagatagatcaatatgtgatatatctttttacaaatatacgagttaaaattcaatttatacaatttaaaataaaaataataaatttgaccatgaattacacgttcaattcatagtcaaatttgttatttttgtttctatttgtataaattgaatttgaatttgcatgtttatgaagtgacatatcacatattaatcaatcctactaaattttttaaatttttttgatgacttttaagtgacatgtaaaaaatgagagaggatatccccttacgggatgttttgagttttccagcatttgagttcatcattagtcgtctgacctgtgtgattatttcgtgcgcagattgatccgtcgttgagcaaggcgtacgcgttcttgctgaagggcatctgtccgccgaacagcaaccagacgttcccgacgacgaccaccttcatggacatcctgacgccgaccaagttcgacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcgctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacgttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccgggacgcagggcgagatcaggctcaactgcagggtcgtcaaccctgtcaatgtcactgctactgcagctgatgatcaccaccttacttcctcttcctcctcttcttcagatgaagtggctgcaagctaattaattaactgattaccactgcttgttagtaggtgtgcatgcacagacagtgattgagatgtgtgtgaagttcagtgtgatgagatgattagatgcttcaattgtttgttgcagttacagtgattgagagacatcagatcttgtttacctgatgtaggtgttggtggttgatactgtcaccatcttgtgcttgtcagtctgaaaaataaattgttgcatccagcatgcactggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0162000, RefSeq:Os05g0162000