Os09g0531800

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0531800| Description = Glycosyl transferase, family 8 protein| Version = NM_001070291.1 GI:115480324 GeneID:4347670| Length = 4037 bp| Def...")
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Gene Name

Os09g0531800

Description

Glycosyl transferase, family 8 protein

Version

NM_001070291.1 GI:115480324 GeneID:4347670

Length

4037 bp

Definition

Oryza sativa Japonica Group Os09g0531800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21688689..21692725

Sequence Coding Region

21689082..21689330,21689434..21690021,21690100..21690454,21690529..21690764

Expression

GEO Profiles:Os09g0531800

Genome Context

<gbrowseImage1> name=NC_008402:21688689..21692725 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21688689..21692725 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgatcaaagattctgctgtccttgggaaatacagcatttggagaaaggagaatgagaatgagaactcagatttgacagttagattgatgagagaccagattattatggcacgtgtttattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccaggatcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttcatcatagtgcacctgagaaagtcagagtaatgggtcaacttctatccaaggctagagaagatgtgtatgattgcaaggcggttactcagagacttagagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacatttcttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgcttaacaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttggaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgttgtgaactcaaccatcatgaatgctaaggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatgaacatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatgaatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagccatgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacctaaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccacaggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaagatttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacctgtggggagagttttcatcgttttgacaagtatcttaacttttcaaatccacatatcgctcggaacttcgatccaaatgcatgtggctgggcatatggaatgaacatctttgatctgaacgagtggaagaagaaagatatcactgggatctaccacaggtggcaaaacatgaacgaagaccgggttctttggaagcttgggacacttccacacggcctcttgaccttcttcaagttgacgcatccccttgacaagtcgtggcatgtcctcggattaggatacaacccaagcattgaccgctcagagatagataatgcagccgttgttgattacaacggtaacatgaagccatggctggagttggcaatgaccaagtatgaccaagtacagaccatattggacaaggtatataaagtatga</cdnaseq>

Protein Sequence

<aaseq>SIKDSAVLGKYSIWRKENENENSDLTVRLMRDQIIMARVYSVLA KSKNKNDLYQELQTRIKESQRAVGEATADSDLHHSAPEKVRVMGQLLSKAREDVYDCK AVTQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNSIHCLSMRLTIDYYLLPLEKR KFPRSENLENPELYHYALFSDNVLAASVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNM WFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSN LKYRNPKYLSMLNHLRFYLPQVYPKLDKIFFLDDDIVVQKDLTGLWDVDLNGKVTGAV ETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLNEWKKKDITGIYHRWQN MNEDRVLWKLGTLPHGLLTFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVDYNGN MKPWLELAMTKYDQVQTILDKVYKV</aaseq>

Gene Sequence

<dnaseqindica>3396..3644#2705..3292#2272..2626#1962..2197#actccccccaccccactctcggcggaggaggcggagagggaagcgcgccgcgcgcgacgtacgtgcactctccggcgaggtggacccccgcggatcctacccttcgctggagatggcgaactcgaagcggctcccgtactccacggccggcggcggcggaggagggaggcgcggcgtggtggcgccgctggtggtcgtcgtgttcctcttcgttctcgcgccgtcgatcttcttcgtcgcgtgcaatgggggccacgtcggctcaggttccggtttgcatccccctcccccctcctgatgcgcggcgctgtcggttgttaatcgcatcctccgtcgcgaatgtagcatctagattgtttttttttttttaaggtgggggtggggactggggagtgatgtgttcaggtttggttagtttcccagcgttggtctgagggatattactcggaatggaatccgagtagatgtcagtggtttaggtactattgttaaattcaattgatgagttgtattagtaggcttggttatgattttggatagaaaacgtagataattggatcatgatgctctgttttggaaacaaaaaattaatccatcgcactttggaggaatcatgagtttacagcagacagttgaagttgtgattcaagtgattttggaaaccattttcctatctattgtagtgtcacttgtgcctttgctaggttagatgtgtgacattgtggggaaagccctagctattaagaatctagggtgcacaagtgaattgtggatgtaattgtagtgccaaaagcctataaacaagaaaactacatttattagaactgtaggaacattgtcaatgttttgtagtatttgaatactgttatactgatttgaaatagataagtgatgttgtagtttgtttacctgcagatcccatggatatggaaggtactcaggtatttttccattctgggagctagttaattgcttagcctaaattttgaggatccatctcacattaaagctttcttgcaggaaacagaatggcaaaaacagctgccaacgaacaacctgaaatctattttgtccaaggaggtcagaattgtctcgcgacttagtaatataatttcttatctttcttttttggtttcatggaaatgtacaagggtacataacaacgtgctcatctttgctatgctactaatttcgcaacgtcatcctctctgatttgtccttgcaactgattgccttttctctaaataccatgctactctctgttgttccaagtagatttgcatgctgtgtcccctatctgctctgtaattctgttgcggacattttgatttttcaattaccatctactgttatttgcataagaaactgtcttcttgttcagaagtatcctcaatttttctgttcttttagtcttatacatgccttctggtctccagatgtttgatgctttagcttctagtcaacaagaagcaggtgctttgagtgttgattttttcataaaacgtgcatctccctcttggaaaactgatgatctagtcaatgacctgagcaatgcgagtttggatattgatgacaaggttaaatctgcaaacagctctacagataaaacactcaaggatgatactggtacaaaaataaccatgcttttttttaaaaaaaagcacattttaaatttttacatcgtctgattaggtatgcaagaaaataaacttcttgtctgtgcagatgaacatcaagtcgacacggctgcaaaaaatgttcgaagggtaagaatgctgatcttcttgtatgtacattgatgcattgttatttgtttctatcgtatgcattatgacatcattcatcccttgatactgtttggtcactaaagaaactaagggagaaaaggcgtgaaaagagggcaatggatttgtaaggaaagatgatgaagcacgtgttaagctggagaatgctgctattgatcgatcaaagattctgctgtccttgggaaatacagcatttggagaaaggagaatgagaatgagaactcagatttgacagttagattgatgagagaccagattattatggcacgtgtttattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccaggatcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttcatcataggtttgtgcctattttcacgtcatatttttatatctcatcttgttctctatcatgacaaataatgtactttgcagtgcacctgagaaagtcagagtaatgggtcaacttctatccaaggctagagaagatgtgtatgattgcaaggcggttactcagagacttagagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacatttcttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgcttaacaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttggaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgttgtgaactcaaccatcatgaatgctaaggtagtttcgtcttcctttttaatcaagtgcaaagtgtgataattgttctaacagctatctatggcataatcttttcaggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatgaacatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatgaatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagccatgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacctaaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccacaggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaagatttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacctgtggggagagttttcatcgttttgacaagtatcttaacttttcaaatccacatatcgctcggaacttcgatccaaatgcatgtggctgggcatatggaatgaacatctttgatctgaacgagtggaagaagaaagatatcactgggatctaccacaggtggcaaaacatggtgagattactacttccatgattggatctcattgatttagagatgtcatgcaaaacgatttactctaacatcaatgttgctttttttttttttcttctaacagaacgaagaccgggttctttggaagcttgggacacttccacacggcctcttgaccttcttcaagttgacgcatccccttgacaagtcgtggcatgtcctcggattaggatacaacccaagcattgaccgctcagagatagataatgcagccgttgttgattacaacggtaacatgaagccatggctggagttggcaatgaccaagtatgaccaagtacagaccatattggacaaggtatataaagtatgatcacccttacatccgtggatgcaacttggccaagtagatgtgatgtaaagctgacggatatcacccagcctgatcagaagtgccccttctccctgcgaaacatgcttcgctcgatcaaagtatagtagctagagctggagctattgattgcccttctccctgtcttttttttttaaaaaaaaagctagatgttctcacgaacgtgtgttttaggcttacagtagttctttcgttcaattgatgatgtgctgttttgtttgaccatcgatattataaggagaaacctgttgattgtgtgtttagggtgggtgttgccatcgaaattgtcaggagtattgttggcaactgacattgccatatgtgtaagtgtggaactgtggatcaatgaaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0531800, RefSeq:Os09g0531800