Os05g0163300

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0163300| Description = Similar to Arabinogalactan protein-like| Version = NM_001061270.1 GI:115462270 GeneID:4337901| Length = 1114 bp| De...")
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Gene Name

Os05g0163300

Description

Similar to Arabinogalactan protein-like

Version

NM_001061270.1 GI:115462270 GeneID:4337901

Length

1114 bp

Definition

Oryza sativa Japonica Group Os05g0163300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3693825..3694938

Sequence Coding Region

3694078..3694905

Expression

GEO Profiles:Os05g0163300

Genome Context

<gbrowseImage1> name=NC_008398:3693825..3694938 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3693825..3694938 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgtggccaagaagagtttggcatccatggcggcttcggcgacgacgaccatcctcgtggcggcgatgttggtggtgatggcggtggagtctccggtggcgaacgggcaggcggcggcggctgcgccggcgccggcgccggcggcgccgaagacgatcacggcgatcctgaccaaggccggtcagttcaccaagttcctccagctactgcagtcgacgcaggccggcgagcagatcaacaaccagatcaaggggaaggcgtcgtcctccggcgggctcaccgtgttcgcgccgccggacaacgcgttcgcggcgctccccaccggcaccctcaacaagctctccgaccagcagaagacgtcgctggtgcagttccacgtcgtgtccgcgctgctccccatggcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcgagaccgccgccggcaagtacccgctcaacgtcaccgccgagggctcccgcgtgaacatctccaccggcgtcgtcaacgccaccgtcgacaacacgctctactccggcgaccgcctcgtcgtctaccaggtcgacaaggtgctgctgccgtgggcgctctacggcccgcccgtgcccgcgccggcgccgtcgccggcggacaaggccaagaagaaggccggccccgtcggcgtggccgacgcgccggcggccgacacggctgccgggacgacgacgacgacggtggcgacggcgtcggaggcggcggcgcggggcacggtgcggcggggcttggtcggcgtggccgtcgccgtggctgtcgcgtggtgtggcatgtga</cdnaseq>

Protein Sequence

<aaseq>MHVAKKSLASMAASATTTILVAAMLVVMAVESPVANGQAAAAAP APAPAAPKTITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDN AFAALPTGTLNKLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLN VTAEGSRVNISTGVVNATVDNTLYSGDRLVVYQVDKVLLPWALYGPPVPAPAPSPADK AKKKAGPVGVADAPAADTAAGTTTTTVATASEAAARGTVRRGLVGVAVAVAVAWCGM</aaseq>

Gene Sequence

<dnaseqindica>34..861#atctcattgcactaaactgctcactgcatttgcatgcacgtggccaagaagagtttggcatccatggcggcttcggcgacgacgaccatcctcgtggcggcgatgttggtggtgatggcggtggagtctccggtggcgaacgggcaggcggcggcggctgcgccggcgccggcgccggcggcgccgaagacgatcacggcgatcctgaccaaggccggtcagttcaccaagttcctccagctactgcagtcgacgcaggccggcgagcagatcaacaaccagatcaaggggaaggcgtcgtcctccggcgggctcaccgtgttcgcgccgccggacaacgcgttcgcggcgctccccaccggcaccctcaacaagctctccgaccagcagaagacgtcgctggtgcagttccacgtcgtgtccgcgctgctccccatggcgcagttcgacaccgtcagcaacccgctccggacgcaggccggcgagaccgccgccggcaagtacccgctcaacgtcaccgccgagggctcccgcgtgaacatctccaccggcgtcgtcaacgccaccgtcgacaacacgctctactccggcgaccgcctcgtcgtctaccaggtcgacaaggtgctgctgccgtgggcgctctacggcccgcccgtgcccgcgccggcgccgtcgccggcggacaaggccaagaagaaggccggccccgtcggcgtggccgacgcgccggcggccgacacggctgccgggacgacgacgacgacggtggcgacggcgtcggaggcggcggcgcggggcacggtgcggcggggcttggtcggcgtggccgtcgccgtggctgtcgcgtggtgtggcatgtgacagtaaaggagaatgttggagattgccaattcaccatgggatttttttttcttttaattttgtggaaaggtgttaaaattgttttgttgttttggtttttcttgttctttttgtatgatttggtaggattttgttttgtccgtgtcctatgttgatcttttagagtttttcactgtgtgttgtatgtcttttcgtggttgttatatatgtaataagaagtgtttgtatattgtggtatctaatttgttacttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0163300, RefSeq:Os05g0163300