Os05g0163700

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0163700| Description = Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) ...")
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Gene Name

Os05g0163700

Description

Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) (G6p) (AtG6)

Version

NM_001061273.1 GI:115462276 GeneID:4337904

Length

4601 bp

Definition

Oryza sativa Japonica Group Os05g0163700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3708686..3713286

Sequence Coding Region

3708839..3708967,3709594..3709686,3709808..3709979,3710068..3710144,3710261..3710420
,3710546..3710655,3710763..3710822,3710934..3711007,3711119..3711242
,3711364..3711441,3711669..3711775,3712948..3713040,3713150..3713165

Expression

GEO Profiles:Os05g0163700

Genome Context

<gbrowseImage1> name=NC_008398:3708686..3713286 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3708686..3713286 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcttggcaggcggcggcggaggcggcaaggtggggctgccggcgttggacgtcgcgctcgcgttcccgcaggccacgacggcgtcccagttcccacccgccgtatcggattactaccagtttgatgatttgcttactgatgaagagaagacacttaggaagaaagtccgtggtattatggagagagaaattgcacccattatgacagagtactgggagaaagcagaatttcccttccatgccattcccaaacttgcaactcttggcttggcaggagggacaacaaagggatatggttgcccaggactctcacttacagctagtgctatttctgttgcagaagttgcacgggtggatgccagctgctccacatttattttagtacattcctctttggcaatgagcacaattgcactttgtggatcagaggctcaaaagcagaagtacttaccatcattaacgcagtttagaacaattggttgctgggcattgacagagccagattatggaagtgatgcaagttcattaaggactgcagcgaccaaggtgcctggcggttggcatttggatggccaaaagcgttggataggcaacggcacttttgcagatgtgctcatcatcttagctagaaattcagatacaaatcaactaaatggatttattgtcaagaaaggagctcctggtttgaaatgtacaaaaattgaaaataaaattggactcagaatggttcagaatgccgacattgttctgaataaagtatttgtccctgacgaagatagattaactggaatcaattcatttcaagacataaacaaggtccttgctatgtcgcgcattatggtggcatggcagccaattgggatatccatgggggtcttcgacatgtgtcatcggtatttgaaagaaagaaagcaatttggagttccgttggcagcttttcagctcaaccaagaaaagcttgttcgcatgctaggaaacatccaagccatgcttcttgtcggctggcgcctgtgcaagctgtatgaatcaggcaaaatgacaccaggccatgctagtttaggcaaggcatggacatccaagaaggctagggaggtggtttctcttggccgtgagctactgggtggaaacggaattttggctgactttctggtagcaaaggcgttctgtgatctggagccaatcttctcgtacgaaggcacctatgacatcaacagcttggtgaccggaagagagatcaccggaatcgccagcttcaaacctgctgcattgacaaaatctcgtctttaa</cdnaseq>

Protein Sequence

<aaseq>MGSLAGGGGGGKVGLPALDVALAFPQATTASQFPPAVSDYYQFD DLLTDEEKTLRKKVRGIMEREIAPIMTEYWEKAEFPFHAIPKLATLGLAGGTTKGYGC PGLSLTASAISVAEVARVDASCSTFILVHSSLAMSTIALCGSEAQKQKYLPSLTQFRT IGCWALTEPDYGSDASSLRTAATKVPGGWHLDGQKRWIGNGTFADVLIILARNSDTNQ LNGFIVKKGAPGLKCTKIENKIGLRMVQNADIVLNKVFVPDEDRLTGINSFQDINKVL AMSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAMLL VGWRLCKLYESGKMTPGHASLGKAWTSKKAREVVSLGRELLGGNGILADFLVAKAFCD LEPIFSYEGTYDINSLVTGREITGIASFKPAALTKSRL</aaseq>

Gene Sequence

<dnaseqindica>4320..4448#3601..3693#3308..3479#3143..3219#2867..3026#2632..2741#2465..2524#2280..2353#2045..2168#1846..1923#1512..1618#247..339#122..137#gtgagaagagctcaaatcctccaaactttttttcctcctccatatccatcgatcgatctcgccatcgtcctcgagcgagcgggcggctgcggcgagctcgatccgatccccgccggcggagatggggagcttggcaggtgggtgggtgacgtggcggccggccggcgcggggtcctccggaactttcgggggtgggtgggctcgagtggatgactcatcgctagctggatgatggttttcttgcaggcggcggcggaggcggcaaggtggggctgccggcgttggacgtcgcgctcgcgttcccgcaggccacgacggcgtcccagttcccacccgccggtgagacctcctctctctcgctttcccggtggtgttctcggtttcccattattggaaataatgagatattatgattgggtgaaactgtcttggccatctaattggagtatttgggagaggtgtgtgcactgtgaagtcagcctgatcgtttgattcgtagttatctccagtcttgggcagcttaatctggctccaagttggcagcaagcagtccctgttctgaactgttagccgtacgaaatcaagattttgttctgaactgttaggcgtacgaaatcaagattttgtttgggatgggatcgttttcggcaatctcttcaactctgtatatcacgtcgctttttatttggttaagttagtgggatttggtcggattttaactctcacggtgaggaaaattggattttagtggagtatccttttcagccctgttcatattttgtttggaggaattgtcagttctgctcctcagctatcatgggagctttacatttaatcttgtgaattaactaatataagctaacaacattatttaagacatgcgtttttagaaatcggattgttttcttcgtagttggtttttaacaactaaatctggtccatacacgtttctttctttatttatgagtactttcgattgcaataataattaggcaggtggtttgcttgcacggcttgcactggtgttgtacttttcttacgttgttgtcagcaagtacttgcgtttcttctttcgcaatcttcttcgacttatttaggttggacaaattaatttccgtggcatttatactagtcactgttattcaatattcctaataatcgtggattgctgtaccttactccatgtaaatttgttagccactttttatctcgggatagagataaagatggtaaaagaccaagttgcccatactagtaaatcattgatctgtgttgaatatgctcttctatgttccacacagatttaagcagcacttgcgcatgcatgtatgcgaattcaaactacaaaagttaaaaatcctttactgtgtgtgcgtgtgcaccttacaataatcaataaagtgaaaaatcaaaacgcaccttacaactcttgtaaggagggagaaatgtacagcatatagttatgcaataaactacatattggttgtaagttcataaaattgcttttgcagtatcggattactaccagtttgatgatttgcttactgatgaagagaagacacttaggaagaaagtccgtggtattatggagagagaaattgcacccattatgacagaggtatgttgttgctatacatagttttcatttgttaatcccctgcttcttttttttttttgcaaaacatatatatggtatatcttctaggactagtacatttttttcttgtcgtcgctggatggtaactctcccttgggttgactagctgttgtgttacagtgacagttgcctgctcgatgtgtatcatgtcataactataaacccctatgggctttttacatatgcagtactgggagaaagcagaatttcccttccatgccattcccaaacttgcaactcttggcttggcaggagggacaacaaaggtatataaaatactaaatcatctagtacttatgttttacatttgactgtaaaatttcaccagtacgctcgttgtctcattgaaatttgatccttttccttgaatttatcttggcgttacagggatatggttgcccaggactctcacttacagctagtgctatttctgttgcagaagttgcacgggtggatgccagctgctccacatttattttagtacattcctctttggcaatgagcacaattggtaaagctataacttattcagatgattttgtttgaaatgtgttatagactgaccaagacaactattttctgagctcactatttttgtcctttcaattttctgtgcaaatagcactttgtggatcagaggctcaaaagcagaagtacttaccatcattaacgcagtttagaacaattggttgctgggtgagttgcattctcctatttatgtggttagcctttgtagcttttattatagtattcaacatgctgttttacatattgtcatcttaagaagaatgggtcttcttgctgtaggcattgacagagccagattatggaagtgatgcaagttcattaaggactgcagcgaccaaggtttgaaacatagatatcatgaaaattttaacttctaagtaaagaaaaatatctgaatgtttctgcacaaccttacaatgttgtcatgttggtttttaccttggtaggtgcctggcggttggcatttggatggccaaaagcgttggataggcaacggcacttttgcagatgtgctcatcatcttagctagaaattcagatacaaatcaactaaatgggtaatcatcttccgctggactattgttgatatcattttgtctaccactgtacacatgttaattcgaactcatttctatgcccatgaatgtgaccactcataattgatatggcaaacttcctctagatttattgtcaagaaaggagctcctggtttgaaatgtacaaaaattgaaaataaaattggactcagaatggttcagaatgccgacattgttctgaataaagtatttgtccctgacgaagatagattaactggaatcaattcatttcaagacataaacaaggtaacaaagacatctcttttgattgcgctaatcctactctgtgtcagtcaatttgaatacactgccatgtgcactaacctgatttttacttgctgaaactttaactaccggatcaggtccttgctatgtcgcgcattatggtggcatggcagccaattgggatatccatgggggtcttcgacatgtgtcatcggtgcgaatcaccttcttagttcagtctttactagtttcaaattggtaccacctaatatgtattgactttattatttaccattggataggtatttgaaagaaagaaagcaatttggagttccgttggcagcttttcagctcaaccaagaaaagcttgttcgcatgctaggaaacatccaagccatgcttcttgtcggctggcgcctgtgcaagctgtatgaatcaggcaaaatgacaccaggccatgctagtttaggcaaggtttgtacaaaatcacaatgcacttagaaaaatggcatccaccttatgattgtgcgctgttcggtttgatttacttttcgcttgctttcttcaacatctcactgataatacttgaatccaggcatggacatccaagaaggctagggaggtggtttctcttggccgtgagctactgggtggaaacggaattttggctgactttctggtagcaaaggtaaaatgattcagatttttttttcttttttggtaacataatctctttggacttctccaaatccaaacatgataggtttgattagaaagattaaagtaattcttaagattttccgacgggcacgtctttaccgcagtacgtacattgcatacctttgggttcacggtgctcactcgtgtagcaaagtagtcaatgatagggggaagcgctaccaacatagtaatacaaattcaatatcgcactgtattacacgtgacaactgattctgcaaatttgacatagcattactaggaattcaaggtatccatatcgctacagaaaacattagcctaagggggtgtttgggagagatgggctaactcaaaaccataagtctctaggggagggatttatgtttttgagagtttagcccttctctcccaaacaccccctaagacatcactaacatcactttgacaaacttatcgagcaacttagcccctctctcccaaacaccccctaagacatcactaacatcactttgacaaacttatcgagcaacttttaagttgtacacttctgtcagagtcttgttctttcttaactagtgggtgaacagtgattcataatatacttcttatttgcaggcgttctgtgatctggagccaatcttctcgtacgaaggcacctatgacatcaacagcttggtgaccggaagagagatcaccggaatcgccagcttcaaacctgctgcattgacaaaatctcgtctttaattttttttcctttcaaatgtatatagctgcaatagacaaaataatatacgtccaccctatattttgatgaaagcaaatgggcaataaaaggaatagaaaaaccatatttgttcttgaaaagaaaataaaagctctgatatgcttcgttttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0163700, RefSeq:Os05g0163700