Os04g0165700

From RiceWiki
Revision as of 19:48, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0165700

Description

Cysteine synthase (EC 2.5.1.47)

Version

NM_001058670.1 GI:115457069 GeneID:4335048

Length

4355 bp

Definition

Oryza sativa Japonica Group Os04g0165700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4449159..4453513

Sequence Coding Region

4449405..4449503,4449595..4449675,4449895..4449954,4450378..4450457,4450586..4450637
,4450708..4450845,4451112..4451375,4451694..4451751,4452924..4453033
,4453267..4453458

Expression

GEO Profiles:Os04g0165700

Genome Context

<gbrowseImage1> name=NC_008397:4449159..4453513 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4449159..4453513 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagggctctgatgagcctcatgaggcggcgctccctcctccagagcggcggacgagcaccgccggcgatggccgccgccgccggtggctcaccattcttctccaccctgcagcaagcagccgccgcagacccggtccagtcgcctggcatcttgccagggctcaagatcagggactctgcgtcacagctgattgggaggacacccatggtttacctgaacaaggtcactgaaggatgtggggcccggattgctgctaagctcgagttcttgcagccgtccttcagcgtcaaggacagaccagcaatttcaatgttggaagatgctgaaaagaaggggttgatcaccccaggtaagaccacactgatcgagccgacatcagggaacatgggtattggcctggcattcatggctgctcttaaagggtatgaactcatactcacaatgccttcatacaccagccttgagaggagggtgaccatgagggccttcggcgcaaaactcgtccttaccgacccaacaaaaggtatgggaggcacggtgaggaaggccgccgagctgtatgagaaccatcctagcgcgttcatgctgcagcagtttgagaatcctgcaaatgtcaaggtacactatgagacaactggtccagaaatctgggaggatacacttgggcaggttgatatttttgtcatgggaatcgggagcggcggcaccgtcactggtgttggcaagtatcttaaggagaagaaccccaatgcaaagatctatggagttgaacctgctgaagcaaatgttttgaatggtggcaaaccaggtcctcacctcatcactggaaatggagtgggatttaagccggaaattttgaatatggatataatggaaaaggttattgaggtgaaaggtgaggatgctgttaagatggctcgagaattggcactgaaggagggtcttctggttggaatatcatcaggagctaacacagttgctgctcttgaactagcaaagaagccagaaaacaaagggaagctcattgtgactgttcttccgagtttaggggagagatacctgtcatctgcattgtttgaggaattgagagcggaggctgaggccatgcagccagtgccagtggactaa</cdnaseq>

Protein Sequence

<aaseq>MERALMSLMRRRSLLQSGGRAPPAMAAAAGGSPFFSTLQQAAAA DPVQSPGILPGLKIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRP AISMLEDAEKKGLITPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRV TMRAFGAKLVLTDPTKGMGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEI WEDTLGQVDIFVMGIGSGGTVTGVGKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLI TGNGVGFKPEILNMDIMEKVIEVKGEDAVKMARELALKEGLLVGISSGANTVAALELA KKPENKGKLIVTVLPSLGERYLSSALFEELRAEAEAMQPVPVD</aaseq>

Gene Sequence

<dnaseqindica>4011..4109#3839..3919#3560..3619#3057..3136#2877..2928#2669..2806#2139..2402#1763..1820#481..590#56..247#agtgagccacagcaccgccggcagtgaccaacagcaaccaatcagcaaatcagcaatggagagggctctgatgagcctcatgaggcggcgctccctcctccagagcggcggacgagcaccgccggcgatggccgccgccgccggtggctcaccattcttctccaccctgcagcaagcagccgccgcagacccggtccagtcgcctggcatcttgccagggctcaagatcagggactctgcgtcacaggtgatttaactaattactagtatttccttcttgcttttttcttttaatttaatcttgtgattgttatcaagaacagatttttaccatccatgcatgttgtccagaagggaaaaaaatgattttcttttgcccccaaacacattttagaaaatcttgaatcagttgcatgttctggcttagtacggagtagtgtttattattttaatttcgtttttttttctattttattccagctgattgggaggacacccatggtttacctgaacaaggtcactgaaggatgtggggcccggattgctgctaagctcgagttcttgcagccgtccttcagcgtcaaggacaggtgactaattaattagtaattaagtacctgatgtatctacttttgccttgattactacttatcattagcaccaacttcattcactgctcatttggaatgataacaatcattgaacagctaatgtaatcgccatggcttgcatgtccttttctctctgtcgtcttgtagccatttttgtgatattttgattgggacctgatatttttcagtggctggaattataagtttatccttagatagcatgttgggaaagtagcaaggtttctttcagacaatagtcaggctcgtgctcttgtctgtctgaaatatctgaatgtgacagatatactgtggacctatgtttggtgaggattaagtccagattagtgccacttttttattggacaagttccattttgtaagctctaggtctccacccgatggaaaggggatgtattcgttcactacttttactttgtcagttcgtctagactaatttaaacacatattgctttaagaccaaactaaggaaaggggatgtattcgttcactacttttactttgtcagttcgtctagactaatttaaacacatattgctttaagaccaaactaagtactcctccgtttcaaattatttatcgttctagatttgtcataaatcaaacaaacttatgtttgtttcattagtttttagaagtctgtagattaacatgtgaattatattatgacagtatttcttatggcaaatctaaaaatgtaattcttacgatgttaaactatgtttataaaaattgatgataaaaattaaaaagtttgatttaagacgatcatagaacgaggaataatttgaaaacagagggaatatttgaggctttgactcaaggccacaccatctatctatttcacttccaggattttaatatggtctggcacaatattattggttctgtagaatagttggttaccatagttcatagccttctaaaatatgacaaattacatggtcttaactcttaaggatgatagtatcaacagttattcaccataaaatcagaatatgcacagatgaaggaagaaaacgagaagctgactaattataaatatgaaaaaaaatttcttatgcattagccacacatgggtatataaattaattactgagcttgaattttgtttttggtgtggtgtaatgcagaccagcaatttcaatgttggaagatgctgaaaagaaggggttgatcaccccaggtaaggtcagtgatctaattcttttgaacaactaaactcattaagtacagagattgaccactgaaattaagctatactaagtaacaaatttttatcacagtgccatgtttaagttaaattcatatttatgtaccattaaaattttgagaaaaatctttcacagtgctagcatgggctgttcagttcttgacctggataactcaagggcattttgcttcaggaaaaacggtttaacattgctgtgaaacaaaatcaaacacaccttcacctggatttatgacatctaagttctaaccaaaaatgacaaatctcctgtcgaacagaccacactgatcgagccgacatcagggaacatgggtattggcctggcattcatggctgctcttaaagggtatgaactcatactcacaatgccttcatacaccagccttgagaggagggtgaccatgagggccttcggcgcaaaactcgtccttaccgacccaacaaaaggtatgggaggcacggtgaggaaggccgccgagctgtatgagaaccatcctagcgcgttcatgctgcagcagtttgagaatcctgcaaatgtcaaggtaaagtcttctattcttcaatgcaaaaaatctgcacgcagtagtacttgttgtaatctttgatgaaatgcgaaatcttggttttggtcaatcctgcaaattcttgctgtaagatgatatattatgtttatagaccaagattatatgcgtaaagcttcccatgtgagcgaattaaagctcaattcagacatataagtttcatattctggagtaagtatgatacttcaattgctattgtttctgatttgtgttgatcaaaattgaaggtacactatgagacaactggtccagaaatctgggaggatacacttgggcaggttgatatttttgtcatgggaatcgggagcggcggcaccgtcactggtgttggcaagtatcttaaggagaagaaccccaatgcaaaggtactaaaacaaaaaaaaaaaaaactccagatatatgtgtgaaattaatgccatttgtgtgtgtatgcagatctatggagttgaacctgctgaagcaaatgttttgaatggtggcaaaccaggtaagatctagctctcaggaagatttatccctttttttttagataatgaagatttatccttttgtagtaggtaattaattacttatcatttcacttgtcataatgttgttcactgaaccgaattgcaggtcctcacctcatcactggaaatggagtgggatttaagccggaaattttgaatatggatataatggaaaaggttattgaggtaaatgaatttaggttcacttcttttcttagtacattatgagaaagattcagagttttactggctagcaccacaagttggctttcgagactcacctcctccttaataccatcgattacgaaagggcatgtagcctagtggttacagtgacctgagtaatactccaaggtcctaagttcaaatctcctatggagcgaatttcagattgagttatttccggggctaagttccctatttcaatggccgtatatatccggttggatgtagaggccaggtaaaaaaaatacccttatcttaaaaaaaaaattaaaaaaaataaaaaaaaaaaccatcgattcctttctttcgtatccagctttttttttttttacattatactatataggcaatactaagttgctaagtaaaactggcatatggtaggtgaaaggtgaggatgctgttaagatggctcgagaattggcactgaaggagggtcttctggtaagtgtcagaatatatttgtttcttgttgttcagtcaatgctaaatgtcagtaatgtcagaaaataaaacatcatgcaataaaaaaatcgatattcaaaatatagaagatttttcttagctctgcaagaatgttggttaatgtggaattgaatggcgatgcacaattgcactcaattaactgttactgaaatctataacttttttttttcgttgcaggttggaatatcatcaggagctaacacagttgctgctcttgaactagcaaagaagccagaaaacaaagggaagctcattgtggtatgtcacacatatcctatttgtgcaccattaattgcaaagttaacatgaataaatttcagaaaaccagccaatgcgacttttttttcagactgttcttccgagtttaggggagagatacctgtcatctgcattgtttgaggaattgagagcggaggctgaggccatgcagccagtgccagtggactaacttggataatcaacctaggcattgagtatttgatgaacgaaattgctatactctaaataaattttcaatttgtactttaattccccattacaaattatgtatcttcagattgtgctgtcactgaactatatagatggactctctctatgtaattccacatttatcagaataacctatgatctccctctcctttctttttaagttcgagtttctattttccaattttaatggaacaggttaaaaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0165700, RefSeq:Os04g0165700