Os05g0164800

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0164800| Description = Similar to Zinc transporter 6, chloroplast precursor (ZRT/IRT-like protein 6)| Version = NM_001061277.1 GI:115462284 ...")
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Gene Name

Os05g0164800

Description

Similar to Zinc transporter 6, chloroplast precursor (ZRT/IRT-like protein 6)

Version

NM_001061277.1 GI:115462284 GeneID:4337908

Length

2779 bp

Definition

Oryza sativa Japonica Group Os05g0164800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3786021..3788799

Sequence Coding Region

3786225..3786539,3787875..3788747

Expression

GEO Profiles:Os05g0164800

Genome Context

<gbrowseImage1> name=NC_008398:3786021..3788799 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3786021..3788799 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggggacggggtgcttcccggcgggggagatggcggcggtggcgagggtgtgccgggacggggcggcggcggcgaggctcaagacgggctccctgctcgccatcctcgtggcgagcgccgtcggcatctgcctccccgtggcgctcacgggggcgttccgcgggaaggccgggtacgcgcgcggcctcctcctcgtcaagtgctacgccgccggggtcatcctctccacctcgctcgtccacgtcctccccgacgcgcacgccgcgctcgccgactgcgccgtcgccacgcgccgcccgtggcgggacttccccttcgcgggcctcttctccctcgtcggcgcgctcctcgccctcctcgtcgacctctccgcctcctcccacctcgaagcccacggccaccaccagcacgcggaggagggggagtcgccgccgccgccgccgccgacccaccaaccctacgccccaatccccaccaccaagaagtcccccgtcttcgagctctccggcgagatgagccccaagaagcgcgcgcactcagacgacacggaccgggacgacgtggcgctcttcggggccaagagcgcggtccggagcgacgaggtcgtcgtcgccccccgtgtcggctgccatgggcaccacgacgtggtggaggttggggaggaaggaggaggaggggaggaggaggaggcgaggaggaagcagaagatggtgtccaaggtgctcgagattgggatcgtgttccactcggtcatcatcggggtcaccatggggatgtctcaggatgtctgcgccatccggccgctcgtcgtcgcgctctccttccaccaggtgttcgaaggaatgggcctcggcggctgcattgcgcaggcaggttttgggattgcaacggtgggttacatgtgcgtaatgttctcggtgacaacaccattgggaatacttcttggaatggcaatattccatatgactggctatgatgatagcagtccaaatgccctaataatagaagggctccttggctcactttcttctggaatccttgtctacatggcacttgtcgatctcatttctcttgatttcttccacaataaaatgatgtcatcatctaataaattgaaaaaggtctcttatgtcgcattagtgcttggatctgcatccatgtctatattagctctctgggcatag</cdnaseq>

Protein Sequence

<aaseq>MSGTGCFPAGEMAAVARVCRDGAAAARLKTGSLLAILVASAVGI CLPVALTGAFRGKAGYARGLLLVKCYAAGVILSTSLVHVLPDAHAALADCAVATRRPW RDFPFAGLFSLVGALLALLVDLSASSHLEAHGHHQHAEEGESPPPPPPTHQPYAPIPT TKKSPVFELSGEMSPKKRAHSDDTDRDDVALFGAKSAVRSDEVVVAPRVGCHGHHDVV EVGEEGGGGEEEEARRKQKMVSKVLEIGIVFHSVIIGVTMGMSQDVCAIRPLVVALSF HQVFEGMGLGGCIAQAGFGIATVGYMCVMFSVTTPLGILLGMAIFHMTGYDDSSPNAL IIEGLLGSLSSGILVYMALVDLISLDFFHNKMMSSSNKLKKVSYVALVLGSASMSILA LWA</aaseq>

Gene Sequence

<dnaseqindica>2261..2575#53..925#ctcgctcgccgtcgccgtcgcgggagactccggcgagcgcgttgacgtggccatgtcggggacggggtgcttcccggcgggggagatggcggcggtggcgagggtgtgccgggacggggcggcggcggcgaggctcaagacgggctccctgctcgccatcctcgtggcgagcgccgtcggcatctgcctccccgtggcgctcacgggggcgttccgcgggaaggccgggtacgcgcgcggcctcctcctcgtcaagtgctacgccgccggggtcatcctctccacctcgctcgtccacgtcctccccgacgcgcacgccgcgctcgccgactgcgccgtcgccacgcgccgcccgtggcgggacttccccttcgcgggcctcttctccctcgtcggcgcgctcctcgccctcctcgtcgacctctccgcctcctcccacctcgaagcccacggccaccaccagcacgcggaggagggggagtcgccgccgccgccgccgccgacccaccaaccctacgccccaatccccaccaccaagaagtcccccgtcttcgagctctccggcgagatgagccccaagaagcgcgcgcactcagacgacacggaccgggacgacgtggcgctcttcggggccaagagcgcggtccggagcgacgaggtcgtcgtcgccccccgtgtcggctgccatgggcaccacgacgtggtggaggttggggaggaaggaggaggaggggaggaggaggaggcgaggaggaagcagaagatggtgtccaaggtgctcgagattgggatcgtgttccactcggtcatcatcggggtcaccatggggatgtctcaggatgtctgcgccatccggccgctcgtcgtcgcgctctccttccaccaggtgttcgaaggaatgggcctcggcggctgcattgcgcaggtaagcgaaatccatctacctgactgccttcaattacaccgttcatgatcgaattccatggatcaattgttatgaccatagtggttttggcttgaatcatgatcgaattccgtgaatcgatagctgttaccggagtggttttcgcttgaatcatgatcgaattccgtgaatcgatagctgttaccggagtggttctttgcttgaattgcttcttagaattaataattaaagagtgcagcaaagcaaactagctaggacttgtcaaagcagttttgtggctttcagtgtgcgtttcagtgttttagtagtatgaatcgctcatgccactgtcgcctgtcatattgacttgtttagtttaaaataaacataggtgttataatatgtgattagctaccaatgcttgcacataagcagtacacgtgattgttactgtataatctgtttgtcccagattaggccttactgctgttattatcgtttaaaattcagagatgaaaggcgctatataccaatatcaccatgccaggtgctgaatgatagaaagtgatttattaacccccctttgcaccccctgaagtatttctgtaactttggaatggttcttggtggaaacctgcaaggatccctgttgtacaccactagcaactggaacctagtcaccatatgactataacatatactttagcagtgaaagtatccatgtcagaatcttttacacatctaaatccatgatctgtccaattttgttcatccacgccaatcaacatttgtgttattcttagttgccttttttccctcatatcagtatgcacaaaaggaaaatagcactaggtttttaaaagtcctcttttgtttagtggtgtcttgttggagggcaactccagaaagcagtctgacatgttaaccaaaaaagtaaagataagtggctagaggtatgcccaaatgcagtatctacatatatggggggacagggggtgcatgaaaaattggagagtgcaatatcaaactttcagtttttaaaagtgacactgacacaatttctatcatttttcaagttgacagcacataacacatcaaataaagccatcaccttaaatttattatacccctttattaaacagtctaaactttatctgtcactaatcttctaaagtagtaatttctaatttccagtagcataccttattaccttaccattctcaaatctcaactaagttacctgaaatatctggtggttctttctacaatttacaatttgtaattcacaaaagcaccaaataaagattattttgatcttaattgatgagttaatcgatacttttctatttatctcaggcaggttttgggattgcaacggtgggttacatgtgcgtaatgttctcggtgacaacaccattgggaatacttcttggaatggcaatattccatatgactggctatgatgatagcagtccaaatgccctaataatagaagggctccttggctcactttcttctggaatccttgtctacatggcacttgtcgatctcatttctcttgatttcttccacaataaaatgatgtcatcatctaataaattgaaaaaggtctcttatgtcgcattagtgcttggatctgcatccatgtctatattagctctctgggcataggtcataggtgcaaccagagtgaaatacggtgtattgatcctttgtaggaagaaatggatgttttgggagtcaggacttccctcatgtaaattaaacttccacataatgggaaacttaaaaattcttgaatgccttttgatactgtgagccattttcgtctcctgattaccatggacaatcaaaacgtacagtgatttatctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0164800, RefSeq:Os05g0164800