Os09g0531900

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0531900| Description = Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)| Version = NM_001070292.1 GI:115480326 GeneID:4347671| Length...")
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Gene Name

Os09g0531900

Description

Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)

Version

NM_001070292.1 GI:115480326 GeneID:4347671

Length

4012 bp

Definition

Oryza sativa Japonica Group Os09g0531900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21694370..21698381

Sequence Coding Region

21694680..21694955,21695059..21695646,21695733..21696090,21696184..21696518,21696628..21696668
,21696757..21696967,21697324..21697383,21697467..21697492,21698107..21698299

Expression

GEO Profiles:Os09g0531900

Genome Context

<gbrowseImage1> name=NC_008402:21694370..21698381 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21694370..21698381 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaactcgaagcggctcccgtactccacggccggcggcggcgggggaggaggaggaggaggggggaggcgcggcggcgcctccggctccggcgtggtggcgccgctggtggtcctcgtgttcctcttcgtgctcgcgccgtcgatcttcttcgtcgcgcgcaatgggggccacgtccacgtcgcctcagatcccaaggatagggaaggtaatcaggaaacagattggcaaaaacaactggcaacaaacaacctgaaatctattttgtccaaggagatgatcgatgctttagcttctagtcaacaagaagcaggcactttgagtgttgattttttcagaaaacgtgcatctccctcttggaaaactgatgatctagtcaatgacctgagcaatgctagtttggatgttgatgacaaggttaaatctgaaaacagttctgcagaacatgagttatcactgacagataaaacacccaaggatgatactgctgaacatcaagtcgatgcacctgcaaaaaatgctcgaaggaaactaagggagaaaaggcgtgaaaagagggcaatggatttggtaaggaaagatgatgaagcacgtgttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttgggaaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattgatgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagaggctactgctgattctgaccttcatcatagtgcacctgagaaagtcagagtaatgggtcaacttctatccaaggctagagaagatgtgtatgattgcaaggcggttactcagagacttagagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacatttcttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgcttaacaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttggaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgttgttgtgaactcaaccataatgaatgctaaggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatgaacatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatgaatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagccatgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacctaaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccacaggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaagatttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacctgtggggagagtttccatcgttttgacaagtaccttaacttttccaatccacatattgctcggaactttgatccaaatgcatgtggctgggcttatggaatgaacatctttgatctgaaggagtggaagaagaaagatatcactgggatctaccacaagtggcaaagcatgaatgaagaccgggttctttggaagcttgggacgcttccacctggcctcttaaccttctacaagttgacgcatccccttgacaagtcgtggcatgtccttggattaggatacaacccaagcattgatcgctcagagatagataatgctgctgttgttcattacaacggtaacatgaagccatggctggagttagcaatgaccaagtacagaccatattggacaaggtatataaagtatgatcacccttacatccgtggatgcaacttggcggagtag</cdnaseq>

Protein Sequence

<aaseq>MANSKRLPYSTAGGGGGGGGGGGRRGGASGSGVVAPLVVLVFLF VLAPSIFFVARNGGHVHVASDPKDREGNQETDWQKQLATNNLKSILSKEMIDALASSQ QEAGTLSVDFFRKRASPSWKTDDLVNDLSNASLDVDDKVKSENSSAEHELSLTDKTPK DDTAEHQVDAPAKNARRKLREKRREKRAMDLVRKDDEARVKLENAAIERSKAVDSAVL GKYSIWRKENENENSDSTVRLMRDQIIMARVYSVLAKSKNKNDLYQELQTRIKESQRA VGEATADSDLHHSAPEKVRVMGQLLSKAREDVYDCKAVTQRLRAMLQSADEQVRSLKK QSTFLSQLAAKTIPNSIHCLSMRLTIDYYLLPLEKRKFPRSENLENPELYHYALFSDN VLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFK WLNSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNPKYLSMLNHLRFYLPQ VYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGESFHRFDKYLNFSNPHI ARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQSMNEDRVLWKLGTLPPGLLTFY KLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAMTKYRPYWTRYIK YDHPYIRGCNLAE</aaseq>

Gene Sequence

<dnaseqindica>3427..3702#2736..3323#2292..2649#1864..2198#1714..1754#1415..1625#999..1058#890..915#83..275#accacgccactcccctcctaccccactctcgtctcggagaaggcaacgtcgccctcgccgccgcggcggccggatccggcggatggcgaactcgaagcggctcccgtactccacggccggcggcggcgggggaggaggaggaggaggggggaggcgcggcggcgcctccggctccggcgtggtggcgccgctggtggtcctcgtgttcctcttcgtgctcgcgccgtcgatcttcttcgtcgcgcgcaatgggggccacgtccacgtcgcctcaggttccggtttgcaccccccctctcccccccccctgatgtagcatctagattttattattatttttttggtggggtggggactgggagtgatgtcttcaggtttggtaaatttcccagcgttggtctcatggatattgccggaatggaatccgagtagattttagtggtactgttgttaaatgcaattgatgagttgtatttacagggtatggtatgattttggatgagaactctgtatatagataattggatcatgatgctttgttttggaaacgcaaataatcaatctcactttggagaaatcatgagtttacagcagacaattgaagttgtgcttcaagtgattttggaaatcattttcccctctcttgtagtgtcacttgtgccattgcgaggttagaatgttagatgtgtgacattgtgcggaaagccccagctattaagaagctagggcgcacaagtgaattgtgggtgtaattctagtgccaaaagcccataaacaagaaaactgcatttataagaactgtaggaacattgtcaatgttttgtagtatttgaatactgctatactgatttgaaatatgtaagtgatgttgtattctgtttacctgcagatcccaaggatagggaaggtaatcaggtatttatcttttctgggagctagtcaattggtttactagcctaaattttgaggatccatctcactttaaagcttgcttgcaggaaacagattggcaaaaacaactggcaacaaacaacctgaaatctattttgtccaaggaggtcagaattgtcttgcgacttagtaatataatttcttatctttattttttggtttcatggaaatgtacaagggtacataacaacatgctcatctttgctatgctactaatttcgaaatgtcatgatctctgatttgtccttgcaactgattgccctttctctaaataccatgctactctctattgttccaagtagatttgcatgctgtgtcctctatctgctctgtaattctgttgcgaacattttgatttttcaattaccatctactgttatttgcataggaaactgtcatcttgttcagaagtatcctcgatttttctgtgcttttagtcttatgcataccttttggtctccagatgatcgatgctttagcttctagtcaacaagaagcaggcactttgagtgttgattttttcagaaaacgtgcatctccctcttggaaaactgatgatctagtcaatgacctgagcaatgctagtttggatgttgatgacaaggttaaatctgaaaacagttctgcagaacatgagttatcactgacagataaaacacccaaggatgatactggtataaaaataaccatgactttttttgaaaagcacatttcacacaatccgattaggtactcaagaaaatatacttcttttctgtgcagctgaacatcaagtcgatgcacctgcaaaaaatgctcgaagggtaagcatgctggtcttcttgtatgtacattgatacattgttgtttgtttctatcgatatccatttcttatgacctaatacttcccttgatatgttttggtcgctaaagaaactaagggagaaaaggcgtgaaaagagggcaatggatttggtaaggaaagatgatgaagcacgtgttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttgggaaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattgatgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagaggctactgctgattctgaccttcatcataggtgttatatctgtgatctgatatcttatctattttcacttcatatctgatatcttatcttgttctccatcgtgacaaataatgtactttgcagtgcacctgagaaagtcagagtaatgggtcaacttctatccaaggctagagaagatgtgtatgattgcaaggcggttactcagagacttagagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacatttcttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgcttaacaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttggaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgttgttgtgaactcaaccataatgaatgctaaggtagtttctgtcttcctctttaatcaaatgcaaactgtgataagtgataagtgttctgacaactatgtatggcataaccttttcaggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatgaacatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatgaatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagccatgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacctaaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccacaggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaagatttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacctgtggggagagtttccatcgttttgacaagtaccttaacttttccaatccacatattgctcggaactttgatccaaatgcatgtggctgggcttatggaatgaacatctttgatctgaaggagtggaagaagaaagatatcactgggatctaccacaagtggcaaagcatggtgagactactactttcattattggatcacattgatttagagaagaaactgtaatgcaacatgatttagtctaacattattcttgctatttttcttctaacagaatgaagaccgggttctttggaagcttgggacgcttccacctggcctcttaaccttctacaagttgacgcatccccttgacaagtcgtggcatgtccttggattaggatacaacccaagcattgatcgctcagagatagataatgctgctgttgttcattacaacggtaacatgaagccatggctggagttagcaatgaccaagtacagaccatattggacaaggtatataaagtatgatcacccttacatccgtggatgcaacttggcggagtagatatgatgtaaaaagctgacggagaagatcacccagcctgatcagaggtgcttctattaagtggagtaaatacacggccggtgtcagttgttctgaaaaaaataaaatgcgttaacggtagctttcaggcttgcctgccggcttaattttgatgaacctgtcactggaactttctctccagctgatcgatcgatcaccgcatgagttgatggatcgaatggatggttgagagataattttcggttttaattgcgtcattgctggaatctgcaactttgtctgcaaccgtgatgtggggcgtcttttttct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0531900, RefSeq:Os09g0531900