Os05g0165400

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0165400| Description = Conserved hypothetical protein| Version = NM_001061280.1 GI:115462290 GeneID:4337911| Length = 3472 bp| Definition ...")
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Gene Name

Os05g0165400

Description

Conserved hypothetical protein

Version

NM_001061280.1 GI:115462290 GeneID:4337911

Length

3472 bp

Definition

Oryza sativa Japonica Group Os05g0165400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3817733..3821204

Sequence Coding Region

3818824..3818849,3819044..3819227,3819612..3819696,3819842..3819896,3820575..3820713
,3820789..3820905

Expression

GEO Profiles:Os05g0165400

Genome Context

<gbrowseImage1> name=NC_008398:3817733..3821204 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3817733..3821204 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaggcaggcagcaggcagcaagtgagaccatggaacaagaacggaaaggagaagtttccattggcatgtatacttacaatcataattctgacagtgggtttgatgtccatgaaatctatgttaagaggagcagattctgggttctgttgtcatacattggcatggttttccttctcgcaagtgtctgccaactgtatctgtcaaaggaaggcctatccactggttcagtgtggagtattgcctttggaatccttgttgccaaatgtttgcaatacaaacctgtgaagaaagagtcagtggtgataatgccaacttttggggttcagctagaaatacatttttggagtggaagagttcatcgtcgttttgtgccaattggcaagattctgaagccattgctgaatgagtgtgtgacgccggtgacctgttactggagcttggcattgcttctgcgtgatgaagaggaactcaggctagttttccagaaatcccaccctcctgtcaaaatgttggttcctgtctggaaggctctctgcaaattcctaaactctggatgccaaaccagttctgcagtttctgaaccgaaccgttcggaaacatga</cdnaseq>

Protein Sequence

<aaseq>MPGRQQAASETMEQERKGEVSIGMYTYNHNSDSGFDVHEIYVKR SRFWVLLSYIGMVFLLASVCQLYLSKEGLSTGSVWSIAFGILVAKCLQYKPVKKESVV IMPTFGVQLEIHFWSGRVHRRFVPIGKILKPLLNECVTPVTCYWSLALLLRDEEELRL VFQKSHPPVKMLVPVWKALCKFLNSGCQTSSAVSEPNRSET</aaseq>

Gene Sequence

<dnaseqindica>1092..1117#1312..1495#1880..1964#2110..2164#2843..2981#3057..3173#atctcgcctcgcacctcgcaccgctcgcgccgcccctcgccgtcgcccgtcgccggcgccggccgcccttcccctgtccggcgcggcgcggcgcgagggctgtgccaggagaggccgccccagcacaagtagtaggaggccaaccttgggcttgttcgtacctgccgcatccaccaggccaaccaacccctctcccggtcgcgcggtcgccgggtcgtgccgcgtccacgccggcgcgccgcctcgctgcttcggcccctccacgcgcggcgccggcggcccgctctaaggtgtctcggcgcctccagccgagtagccctccagtccatgcgccagcggcgccgtccggagctccagacgaagcccgacggacgaaggtaactcttcccctcattccctgccctgcccgtagatggtttatgtttaggattcaggaatgaattaggaaattaggatttaattcatagttgatttaggatttaggatttgtgaagctttgtaggcttgtagcagagttagtacttatcagtgcacatatttagcagagttagcatggttattggttagcacttaaactagaagaccataatattgttttgtagctgttgctaaggagaatactgattgtgcatggctttttgggcaacttgcatatttgttgaatgtccttgggatgtcttgtacattcattgaaagggatttcttcttgcaaaacatcatcactcattttcaaaatatcaagaaacgaaaagttcctctaaattgtaagatttctaaccgttttgccattttctattctctataaatttaatatgttttgtcaattaatagtttagtactgtactctaatatgtttgacaaaatcaatttatggtcaattatatgaatatataactttacgaaatcatacttataccattatatattatacagctattagattttgggttgttttttttttatctcttctaattttgaatacacaagttaaaaatcctgggcccatccctgggcgcgtgtcgtggtgcgggcgctgctcagcgtaggctgcgtcaagggcgggcgctgggggcaacgactggcggcaccgcatgccaggcaggcagcaggcagcaaggtttgcctcatctctcatgcttcgtgatggatcagatatctgctactgctatgtctatctgtatgctaaaattgttcatatggttgattttttatccatatttctcccctggtttagtgctgattgctggttctgttttagttacctttcagatgtgcctaactgcctaattcagttgctattgttttatccagtgagaccatggaacaagaacggaaaggagaagtttccattggcatgtatacttacaatcataattctgacagtgggtttgatgtccatgaaatctatgttaagaggagcagattctgggttctgttgtcatacattggcatggttttccttctcgcaagtgtctgccaactgtatctgtcaaaggtacacttctcacataaatcagttcccacatgttggtaggagggtttgtcagcgagatttttatctgatatttcaagagtgtcctagtgaaaattacccggttccttatctaatggttaggttccatggttcatcatattgtagataaagctgcaaaatgtttactatttttgtagagccttttttttttcacatgtttcccttattcagaacagattcatatttgcacactcatactgtttttgtggctttgttgaccatccttgtgacgaggttcttagtaccctagaatcttagttgtaatgttctgaaacgcattacctttctgtttatacttatcataactgatgtttatgttggtattgacttgcttcaatattgaaggaaggcctatccactggttcagtgtggagtattgcctttggaatccttgttgccaaatgtttgcaatacaaacctgtgaagaaaggtgaatttttcctcaaatatgtccttatgtggccttctcatattatagtactaccgtatgaaccttaagattaccagaataggatttcaccctgacatccatattagaatgttatgtatttatggatgaaaatgaacgtgtgcagagtcagtggtgataatgccaacttttggggttcagctagaaatacatttttggaggtatataacaacatcctttacaaccttacctgaaattatcaatcatgcttgatatagtctcttgcatcatatatacctacacttgcataattgatcgacactagtaggctaatcttattgcttggttttctgtgatttcccacttttcatatgctacctgaaatagaatgatcactttagctgttcaatattcatcactcatcaccaattattctagtgtcaactgacacgaatgaaactgcttggatgcaatgtccgcctgcttacctggaattctagcaagtagaatagttgttgtatagtaaccccctcctgaggaaacagttgttaggttatgaaggttgattttgacaagaaataggacaacaatctgttctctatgattcactggctagtggctactctcgattagagtaatgattgatatatgcatctacaatatgttccgggttaaacagttatcttttggagaatcatacgagaaatggatttatattaccattatatcaatatgaagttatcaagtatatttaccatgtttgttcacatcttattcatcatttgctctgaggttttctgggagacattactttctttgcttagaaaatggtggactacttaacctttggtaacagatgttggtttgtagaattaaaatttgcaagttctgattcttagtggaagagttcatcgtcgttttgtgccaattggcaagattctgaagccattgctgaatgagtgtgtgacgccggtgacctgttactggagcttggcattgcttctgcgtgatgaagaggaactcaggctagttttccaggtaaagttcatctgttctaatttattactacgggatcaaagaaaaattcagtcaccaatagagcttaacttgcagaaatcccaccctcctgtcaaaatgttggttcctgtctggaaggctctctgcaaattcctaaactctggatgccaaaccagttctgcagtttctgaaccgaaccgttcggaaacatgaccaattttgtgctcaatatagtttgattgcaatattgagaaaaccagctacaattcagataggaatagctaggtgcattttatttggaactatctggtgggggttgtaggacacgctaatgcaagtggcacatcttattggaaggaaatacgtggagaaattttcaagctgatgcacttcacttcacttaacagtgtaaccaatcaatagtttaccctattcatgatgtaaattatgatctcatttgatcatttcattatacgatgataaagagtaacattgttctgctattaccattc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0165400, RefSeq:Os05g0165400