Os04g0185100

From RiceWiki
Revision as of 19:48, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0185100

Description

Conserved hypothetical protein

Version

NM_001058726.1 GI:115457181 GeneID:4335111

Length

2879 bp

Definition

Oryza sativa Japonica Group Os04g0185100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5778013..5780891

Sequence Coding Region

5778303..5778360,5778474..5778564,5778650..5778851,5778930..5779571,5779713..5779947
,5780038..5780157,5780402..5780820

Expression

GEO Profiles:Os04g0185100

Genome Context

<gbrowseImage1> name=NC_008397:5778013..5780891 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5778013..5780891 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaatccgcgacgccatccaagagggccaagacggcggccggtgtcgccaccccgcagaagatggggaaggcggcggcggcggctgcgttggccgaccagttcttgacgccggagaagccgacgccgaaggttgcggcggcggcggcggcggccgagcagatctggacgccggagaagccgaagcagccgtcggcggcggagcggagggcgcggagcagcggcggcgtggcgttctctgtcaagggggtccggcgggcggcgctcgagctgcggcggcggtcggagaggggggcggcgtcgccggcggcggcggcggcggcggcggaggacgagctcgaggccgtggagcggcagcttggtgttggtcccgcgcccgtccggagccccgtcaagcgcacggccaagctgccggagagctacgagatgctgtgcgagttcttcaattgcttcgagagttccacccggttgctccgtatgaagggatccaaggcatccttccccaacatttgtgctagcatccagcatttgtctgaacggaggtttacctacagccatcttgctcagcttaagtacataatgcctgaggttattgttatcaataagatccttttgcgtgacgagacgacttgctgcatgaagcctgatcttcaggtgaacctcctggttgatgcggttgagggtgttgccaagcaaaagggggaaaccggatactcggccttgagaaggatcttcaggcagaggcttgtggattacttcagagaccatcctgagggacatgacattccagagcatgaactgccacatccatttggtccaacaagatcaagtgcaccccaggccattcaagaagatattcccaaaactgtttctgcgctaccgttgtcatctgcaactgatcggcagcctgttgcaatgtctcacatgcctaattccttcaagagaatgttttcacagcgatctgcggctgctgctgctgcaactacaagcacaaccagtccgctttcaaaggttgagccctctattacctcgccattgagcaggaagtcgctgctcggttctcctgtttctggtagtgtgagcttagtccgtgaatccgaaggccaagagaaaagtgtcgagggtgttgcattccagtctggtgtttcagaaggaactcctgcaaagtttgcctctacgcccgtgaggttaatggcagagacaccagtccttcaaacccccaaaaggcctgtgtctggtacaggctatgatactccacctctcaagatggcgaagcgatctgctaggacgaagctcttcatgacaccgacgaaagatgctagcagcatggatgagaaaaagcaaagcacaagtgcgtcgacccttgatggtgatgatgagttgctcagttttctcccaaagtctctcctgcaatcggtgaaggacaaggaaaacagagctttggtggagaagcaaaccggatttgcagatcacattaaaagggagaaactaatagcatcactgccaagcatctttgacattatcttccttatctatcaatcaaggcagcgcactgtgatgacaaagcaggagctcatccacaagataattgcaagcaatccaaaaattgtggacagaggtgaagttgaagatcagttaaaattgttggaagagataattccagactggatctctgagaaaaccgcacgaactggtgatgttctctgttgtgtggatacagcaatgagccaagcagagattcgacagaggctgtatgctgctgaatag</cdnaseq>

Protein Sequence

<aaseq>MESATPSKRAKTAAGVATPQKMGKAAAAAALADQFLTPEKPTPK VAAAAAAAEQIWTPEKPKQPSAAERRARSSGGVAFSVKGVRRAALELRRRSERGAASP AAAAAAAEDELEAVERQLGVGPAPVRSPVKRTAKLPESYEMLCEFFNCFESSTRLLRM KGSKASFPNICASIQHLSERRFTYSHLAQLKYIMPEVIVINKILLRDETTCCMKPDLQ VNLLVDAVEGVAKQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRS SAPQAIQEDIPKTVSALPLSSATDRQPVAMSHMPNSFKRMFSQRSAAAAAATTSTTSP LSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFAS TPVRLMAETPVLQTPKRPVSGTGYDTPPLKMAKRSARTKLFMTPTKDASSMDEKKQST SASTLDGDDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDII FLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGD VLCCVDTAMSQAEIRQRLYAAE</aaseq>

Gene Sequence

<dnaseqindica>2532..2589#2328..2418#2041..2242#1321..1962#945..1179#735..854#72..490#acttaaataccccacgaaaccctagcaaccgccgcctcctccacctccaccaaatccaatccacctccgaaatggaatccgcgacgccatccaagagggccaagacggcggccggtgtcgccaccccgcagaagatggggaaggcggcggcggcggctgcgttggccgaccagttcttgacgccggagaagccgacgccgaaggttgcggcggcggcggcggcggccgagcagatctggacgccggagaagccgaagcagccgtcggcggcggagcggagggcgcggagcagcggcggcgtggcgttctctgtcaagggggtccggcgggcggcgctcgagctgcggcggcggtcggagaggggggcggcgtcgccggcggcggcggcggcggcggcggaggacgagctcgaggccgtggagcggcagcttggtgttggtcccgcgcccgtccggagccccgtcaagcgcacggccaagctgccggagaggtaaagatccaggctccaccatttggatctggttcaattgaattcttacattttttttagtttcagacaatttttctgatgcctgattgcaaatctcgctccttcagtgaatatagtcttcatacccaccattaaatttgatatattgagatgctaatctcttttttatatatatgtttgagatgctaatttttgtactggtgctgactttcaattggtttttgtggatggtttgcttggtcagctacgagatgctgtgcgagttcttcaattgcttcgagagttccacccggttgctccgtatgaagggatccaaggcatccttccccaacatttgtgctagcatccagcatttgtctgaacggtataacctctctctgacagatattcagacaatggctggtgtgttggattgtagtaattcagttcctaatactgataattgtgtgtgcaggaggtttacctacagccatcttgctcagcttaagtacataatgcctgaggttattgttatcaataagatccttttgcgtgacgagacgacttgctgcatgaagcctgatcttcaggtgaacctcctggttgatgcggttgagggtgttgccaagcaaaagggggaaaccggatactcggccttgagaaggatcttcaggcagaggcttgtggattacttcagagaccatcctgaggtatgatcctggaagaaatcccccttgatatatggctattgctagtttgttctatgaaaattgaatgtgcaatttgatactattatgtatttgcagttgatattatcctaaatcctggtgcctgtgttgcttgattttcagggacatgacattccagagcatgaactgccacatccatttggtccaacaagatcaagtgcaccccaggccattcaagaagatattcccaaaactgtttctgcgctaccgttgtcatctgcaactgatcggcagcctgttgcaatgtctcacatgcctaattccttcaagagaatgttttcacagcgatctgcggctgctgctgctgcaactacaagcacaaccagtccgctttcaaaggttgagccctctattacctcgccattgagcaggaagtcgctgctcggttctcctgtttctggtagtgtgagcttagtccgtgaatccgaaggccaagagaaaagtgtcgagggtgttgcattccagtctggtgtttcagaaggaactcctgcaaagtttgcctctacgcccgtgaggttaatggcagagacaccagtccttcaaacccccaaaaggcctgtgtctggtacaggctatgatactccacctctcaagatggcgaagcgatctgctaggacgaagctcttcatgacaccgacgaaagatgctagcagcatggatgagaaaaagcaaagcacaagtgcgtcgacccttgatggtgatgatgagttgctcagttttctcccaaagtctctcctgcaatcggtaagttcttgtggttggtgacaatgattttcttagtttgctccatcgatcaaatgttaaaatatgtgtccgttgcaggtgaaggacaaggaaaacagagctttggtggagaagcaaaccggatttgcagatcacattaaaagggagaaactaatagcatcactgccaagcatctttgacattatcttccttatctatcaatcaaggcagcgcactgtgatgacaaagcaggagctcatccacaagataattgcaagcaatccaaaaattgtggacagaggtatgtgctagctgtggtttcgtttttgttgcttcaactgctctgtgcaatgtgattccagatgctgaatcttttacatatataggtgaagttgaagatcagttaaaattgttggaagagataattccagactggatctctgagaaaaccgcacgaactggtgatgttctctgttggtaagcaagtttttctgatacatgaatgtcattagtgtactattgtagggaaagtgaatcactgctctcttttgcaaatacataatctaattcctggtggtattcattttcagtgtggatacagcaatgagccaagcagagattcgacagaggctgtatgctgctgaatagggaggaactgcagtatggatacattttggttagtactgcagggatgcctatcgatagcaactttacaaccacagaggcttgaagaaatcaagattaaacaaatcggaattaatttagtttaatcaacatattgcagtcttcacatcccgttcaagctcaaatgaatgacttgtatagataacccagccttgctaactgattgctgttgtttttttgttccatcgtgtgtaaactctatttgtaaagccttgaatggcatcaatccagaagaaaggatgtgtctattgaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0185100, RefSeq:Os04g0185100