Os05g0167600

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0167600| Description = Conserved hypothetical protein| Version = NM_001061286.1 GI:115462302 GeneID:4337920| Length = 2397 bp| Definition ...")
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Gene Name

Os05g0167600

Description

Conserved hypothetical protein

Version

NM_001061286.1 GI:115462302 GeneID:4337920

Length

2397 bp

Definition

Oryza sativa Japonica Group Os05g0167600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4054054..4056450

Sequence Coding Region

4054147..4054197,4055178..4055765

Expression

GEO Profiles:Os05g0167600

Genome Context

<gbrowseImage1> name=NC_008398:4054054..4056450 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4054054..4056450 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagccgcatgaaccagccggcagcgagcctagcgaaaatgttcagaacatcgaggaagacaatgagtacctgaacaacaagcgcgggtggctgatggcggtggccacgctgttcgtgggcatggcattccaggcggcgatacagttgcctgcctggttccccgatgactggcctcaggcgtttagctcccacaacatgaagcatagcggtataatattccgagccacggtcgcctctgctccttccccgataagtcctcaacaacacgccgccaccaccctcaccgagggccaaatgagggggatacggtggtatatcatgttcaacacggtgaccttcacgattgccctggcgcttctgatcacgctggtggcggtagggaggtccttggctagtcattccatgagactcatgaatgccatattgttcacggtgatcattagcaccagttgcacctttgtcttggccatctcgagtgattggactgtcatcaggtggatgttacctgtgcttttggtccttggctcctataccctctttatcagcttagtatggcccaagatcatcgagtatcggaaggaaaagaaaagacagcgagaggctcaatcgaacacagcatcgccgccaccttaa</cdnaseq>

Protein Sequence

<aaseq>MDQPHEPAGSEPSENVQNIEEDNEYLNNKRGWLMAVATLFVGMA FQAAIQLPAWFPDDWPQAFSSHNMKHSGIIFRATVASAPSPISPQQHAATTLTEGQMR GIRWYIMFNTVTFTIALALLITLVAVGRSLASHSMRLMNAILFTVIISTSCTFVLAIS SDWTVIRWMLPVLLVLGSYTLFISLVWPKIIEYRKEKKRQREAQSNTASPPP</aaseq>

Gene Sequence

<dnaseqindica>94..144#1125..1712#agaacaactgcagctagcgcttctatctgaaactctgaatatacacggatatttagggagtagaggagtgcagcaagcgcgcacgggcagaccatggatcagccgcatgaaccagccggcagcgagcctagcgaaaatgttcaggttctgtttgcaatctagtagtatcattttttctgcttgattggtctaaatgttaagaagattccctcaaaaaaaatgttgacaagaatttttttttgtttcgagaatgtgcggaagttttagtctttgtcagcagtgatagtttaaaaattatgatgtcgtcaccaatggtcgatatagatggcttgtttttgttggtagtgccctcttttaaactcaattacctgtatataattagaaattgtgatatcttcctacctacagctcttcaagggctgccgtgagaaaaaaaaaacttgtttgagattgtgttcagtttgaagtagtataaaaatgaattaaagaataaatttcactaaactagtactttgataaaattaacacaaaactacatatttaaaccatagtatcatacaactacagatatagaaataattttatcataaagctttacatttaaatcattgtatctcaaagcatagatttagtatcgtctttttcaaaacaaattttagatgtgctatccctacacctcttaccattgtaaaattttaaaatgtgtagttttgcgtaaaaaaaaaaacgatgatccatctgtagttttgtgaaggaaaaaacatgacactcaatttctaaagtatgttattttctaattaagatgctgattttacctcggttttcgttagcacgtttttcaaattgctaaacgatatacttcgtgcgaaactttctatataaaagttgctttaaaatattaaatatatttgttttttaaatttataataattaaaactcgattaatcaagcgttaaatgctttctcgattggcgtaccctaactttatcttcatcttaatctatctcaaatactaaatttgtagtcttgtgatactatgacttaaataattaagtactatatataccaaatttcatgtttttttaaatataattctctcaaacattccttggtttggtgcgaagaacatcgaggaagacaatgagtacctgaacaacaagcgcgggtggctgatggcggtggccacgctgttcgtgggcatggcattccaggcggcgatacagttgcctgcctggttccccgatgactggcctcaggcgtttagctcccacaacatgaagcatagcggtataatattccgagccacggtcgcctctgctccttccccgataagtcctcaacaacacgccgccaccaccctcaccgagggccaaatgagggggatacggtggtatatcatgttcaacacggtgaccttcacgattgccctggcgcttctgatcacgctggtggcggtagggaggtccttggctagtcattccatgagactcatgaatgccatattgttcacggtgatcattagcaccagttgcacctttgtcttggccatctcgagtgattggactgtcatcaggtggatgttacctgtgcttttggtccttggctcctataccctctttatcagcttagtatggcccaagatcatcgagtatcggaaggaaaagaaaagacagcgagaggctcaatcgaacacagcatcgccgccaccttaatttattttcaatgttcaggatctcttaatatcctaggtagtgttagtgttacaaactcatcactatcaaggtttatccctttgagaactgatgtacgtaacatgggatggtactagcccggagatcgagccttcagccttggatatgaatttgatcaagatgtgttgtcttacaaataacaggaaattcgcatggatgtgcatgatgcaaatgtagtgaatttatacttgatttgaacgtttgatgtcggcgatggttttgacagtgtttgagagagcactgacagtattctaccagaggtcaccggtcagaccaagagcatgtactacagagtttctgtgaattggagtattggaccaatcatgcaacaactttgtaaccgagaaacagggattgaggccatgggccattgcgttggatgatgattcaggagcctacagattggctctagactccacctctctctgaatccgccgccggtcgatgatatgcaaaccttggatgattgaatacagtttggtacaccttctcattctgccaaactcaaactcaccatgtacttcacctgctctgcgattgtaacttgttctcgacttcatgtgacagtctagctagttcagctagatatgatattgcagttttggcaaggaataccaaactagtaacagcagaataattataaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0167600, RefSeq:Os05g0167600