Os05g0169100

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0169100| Description = Similar to 60S ribosomal protein L10 (QM protein homolog)| Version = NM_001061294.1 GI:115462318 GeneID:4337928| Len...")
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Gene Name

Os05g0169100

Description

Similar to 60S ribosomal protein L10 (QM protein homolog)

Version

NM_001061294.1 GI:115462318 GeneID:4337928

Length

1885 bp

Definition

Oryza sativa Japonica Group Os05g0169100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4121509..4123393

Sequence Coding Region

4121571..4121580,4122277..4122778,4122883..4122964,4123141..4123206

Expression

GEO Profiles:Os05g0169100

Genome Context

<gbrowseImage1> name=NC_008398:4121509..4123393 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4121509..4123393 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggagacctgcaaggtgctatcgccagatcaagaacaagccgtaccccaagtcaaggtactgccgtggtgtccctgaccccaagatcaggatctacgatgtcgggatgaagaagaagggtgtggatgagttctcccactgtgtgcatctcgtctcttgggagaaggagaatgtcaccagtgaggctcttgaggctgcgcgtatcgcgtgcaacaagtacatgaccaagtctgcaggaaaggatgccttccacctcagggttcgggttcacccgttccatgtgctccgtatcaacaagatgctttcgtgtgccggggcagataggctccagactggaatgaggggtgcttttgggaagccacagggaacctgtgctagggtggatattggccaggtcctcctttctgtgcggtgcaagcccaacaatgctgtccatgccagcgaagccctccgtcgtgccaagttcaagttccctggtcgccaaaagatcattgagagtagaaagtggggtttcaccaagttcagccgcgatgaatacgtcaggcttaagagcgagggtagaatcatgcctgatggtgtcaatgctaagctacttggttgccatggtcgcctctctgctcgtgcccccgggaaggccttcctctcagccgcttag</cdnaseq>

Protein Sequence

<aaseq>MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVD EFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKM LSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFP GRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSA A</aaseq>

Gene Sequence

<dnaseqindica>63..72#769..1270#1375..1456#1633..1698#accctagccgcacatccccgcctcttcccgccgccgtccgccgcgcgcacgccgccgccgccatggggaggagtaagtctaaccatttcctgctctaccgctcgttgtcttgctgtttgttccacggttgcgctggatcggtcgccgcggctccctgatttcaggcgcgttttgggcgtttggtttagatccatagtagctgggcgctgctggattgttgctgttcccggtgttgatctgtgttttgctttgatgaatttaggtgtagatagattttgtagttgtttcgttgcatatctcgttagtttgcttactcaacctgaaggagtcatgttggacttaataggatgtgaatattgttgggggaactgtaccgatctttgattttcacagataatggtagtatgatatgattagtggttctctgtgaatctaaatgatttattctgatgtagctagcagatgtagatgcatttatcctagctagaaatggcttgtttgtggtggttttgttgtttgaagcgaatccctgtaatggatttagttacttcatggctatttctatatccactattttcttgttcatcgatcaattatgattatttagattaatgtaatggatttagtttctttcatgactttgtatattcactatttgcgtgttcatcgatcagttatgaatagtattcagattaacagtgatggggctgtaggtgctttagggtgtttctgagtaactaacttgactttgtggcttgctttggttaggacctgcaaggtgctatcgccagatcaagaacaagccgtaccccaagtcaaggtactgccgtggtgtccctgaccccaagatcaggatctacgatgtcgggatgaagaagaagggtgtggatgagttctcccactgtgtgcatctcgtctcttgggagaaggagaatgtcaccagtgaggctcttgaggctgcgcgtatcgcgtgcaacaagtacatgaccaagtctgcaggaaaggatgccttccacctcagggttcgggttcacccgttccatgtgctccgtatcaacaagatgctttcgtgtgccggggcagataggctccagactggaatgaggggtgcttttgggaagccacagggaacctgtgctagggtggatattggccaggtcctcctttctgtgcggtgcaagcccaacaatgctgtccatgccagcgaagccctccgtcgtgccaagttcaagttccctggtcgccaaaagatcattgagagtagaaagtggtaagtatcaaacagggtgatgcatacgagtacatctaaatttctgatgtgctctgagtaccataagctcatgttccgttcctaacttgcactttcttgttcaggggtttcaccaagttcagccgcgatgaatacgtcaggcttaagagcgagggtagaatcatgcctgatggtgtcaatgctaaggtaaacacgctgtttctaaactaatgcttatcttgggtcctatcaggatgagtaacttattttgttaaaatcctttttcgctttgcttttatgacctgtcaattgctattgtaattgttctcgtatgcatcgttgcggataatctaatctttgtcaatactgtctctatggtgcagctacttggttgccatggtcgcctctctgctcgtgcccccgggaaggccttcctctcagccgcttagatatatctatccttatcatctgtgggaaacgaaatatcggacctttttgtttgtttgtagactcgatcatatatcactttgttgaaccctgaatcaccaagtgtctggtgctatattgcctggtctgaagctatcttgtgttgaacatctttatctgaaatatatatcagatgactttcgtgtcgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0169100, RefSeq:Os05g0169100