Os05g0169400

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0169400| Description = Protein of unknown function DUF1421 family protein| Version = NM_001061297.1 GI:115462324 GeneID:4337931| Length = 3...")
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Gene Name

Os05g0169400

Description

Protein of unknown function DUF1421 family protein

Version

NM_001061297.1 GI:115462324 GeneID:4337931

Length

3805 bp

Definition

Oryza sativa Japonica Group Os05g0169400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4140446..4144250

Sequence Coding Region

4140821..4141936,4142547..4142825,4143837..4143994,4144192..4144249

Expression

GEO Profiles:Os05g0169400

Genome Context

<gbrowseImage1> name=NC_008398:4140446..4144250 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4140446..4144250 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttcaccttgctcccctccgcaagccgccgccgcagcaactccggcgaaatccccggccacgcgcgccgcgggcagcagcaacacggcggcgccgacgaggtggtgcccagctacgacttccagcccatccgcgccgctcccgccgccgcggcgccggcctccgcggcgagcccttgggggtcgctcgactccaaggcggcgtcctccaacctcaagagtgctggcatgttggagtctcatgtgctcaagaaggtcagtcacgaagaagaaaggggcaacttcagtgcagtctccatagcagatattgatcgcacaatgaagaaatatgctgataacctgctacatgcactggaaagtgtaagctcaaggctatcacagctagagggcagaacacaccatcttgagaactctgttggtgagttgaagctaataattggtaactacaatggcagcactgatggaaaactgagacaatttgagaacacactgcgtgaggttcaagctggtgtgcagattttgcgtgacaagcaagaaattgttgagacacaggtccaactttcaaagctccaattgtcaaaagcagaggatgctcaatcagaaaaggctggtgttggtcaggcagattcaaggcagcagccaactctaccccaacctcagcatcaagcccctccgccttcccatccaccggcattgcctgcccttcctgctccaaatgcaccacctccacctgcaccccaaagccaacctccatcacaattcccaggccatttaccacattcccaggtgcaatcagtcccacctgctccaccgactccattagcaccaaccataccacaggagtcctactatcccccgtcagcagtacagccaactgacaccacacaccagcagtatcaagctccacccgccccacagtcgcaggcacctccagcaccaccacagcattatcaaacaccacctcagtatgctcagtattctcagcctcctcctgcaagtgctaacccctcaactgcagtcccaccgtcagtgcatcagcagcctgaagaagtagcagcgccgtatggccctcctcctcagagctatcccccaaatgtgcgcctgccatctccttatgtgccaccacctagcgggcctgcacctcctttctatggtccaaaccctggcatgtatgagcctccagcagtccggccaaactccgggccacctccatcctacaatactggatacaaaccacagggtggaggcggtttccccgagccatatggttacagtggatctccatctcaccgtggcaatgctggaatgaagtcgccctcgccgtttcatccaacaggctctgcgggaagcggcaactacagcaggctccctacagctcaaatgctgccccaagccgcgtcagcgagctccaccccaagcgcctcctcgggcaacagggtgccgattgatgacgtggtagacaaggttgccacgatggggttctcgagggagcaggtgagagcggccgttcgccagctgaccgagagcggtcagaacgtcgacctgaacatggtgcttgataaggtgatgaacggcgccgacgcccagccccagagaggctggcacgggcgttaa</cdnaseq>

Protein Sequence

<aaseq>FTLLPSASRRRSNSGEIPGHARRGQQQHGGADEVVPSYDFQPIR AAPAAAAPASAASPWGSLDSKAASSNLKSAGMLESHVLKKVSHEEERGNFSAVSIADI DRTMKKYADNLLHALESVSSRLSQLEGRTHHLENSVGELKLIIGNYNGSTDGKLRQFE NTLREVQAGVQILRDKQEIVETQVQLSKLQLSKAEDAQSEKAGVGQADSRQQPTLPQP QHQAPPPSHPPALPALPAPNAPPPPAPQSQPPSQFPGHLPHSQVQSVPPAPPTPLAPT IPQESYYPPSAVQPTDTTHQQYQAPPAPQSQAPPAPPQHYQTPPQYAQYSQPPPASAN PSTAVPPSVHQQPEEVAAPYGPPPQSYPPNVRLPSPYVPPPSGPAPPFYGPNPGMYEP PAVRPNSGPPPSYNTGYKPQGGGGFPEPYGYSGSPSHRGNAGMKSPSPFHPTGSAGSG NYSRLPTAQMLPQAASASSTPSASSGNRVPIDDVVDKVATMGFSREQVRAAVRQLTES GQNVDLNMVLDKVMNGADAQPQRGWHGR</aaseq>

Gene Sequence

<dnaseqindica>2315..3430#1426..1704#257..414#2..59#attcaccttgctcccctccgcaagccgccgccgcagcaactccggcgaaatccccggccgccgccgccgccgcccgccgccgcgatgaacgcgtcgcagttcatggacaaacagatcctcggcctcgcggcctcgggcgccggtgcggccgccgccgccgccgccgcgtcgtcgtcccctcccgcggcgggaggaggtgggggcggcgggctgttcgatctgatgagccccgacccgcaggaggacggcggcggccacgcgcgccgcgggcagcagcaacacggcggcgccgacgaggtggtgcccagctacgacttccagcccatccgcgccgctcccgccgccgcggcgccggcctccgcggcgagcccttgggggtcgctcgactccaaggcggcgtcctccaacctcaaggtatcatctcccagccgagggcgcctccgatagatctgctcagctcgcctcgcctcgcctgcttcacacacgaattgaacaagcgaaatttccaaacattcgtaagcttgtgtgcttttcttagccataggaatgtccagttctaggtgattggtaatactttgtgactctgcgctgtagtgatgtcgaattgattgtgtgaagttgtgattgctcgtttgctattacatgattcagatatagaaaggaaagtgacattttagtattcgatgttggtgaagattgatgccttatctgctcataaaggggagaccacagtgctagttaggatactactagttagcttgatttctacatttagcagttcaatgctatttctgtggaaataaccctgagcccctgactgtaatcaccactgtattacgatactgagcagttcaatcagtttgttttcctaaaaccatttgaggatattttcagatgctactctgttatgggtaaatcatgctcttatcccaagaggcaaagacccgaatatgtcaagtgttcactttgctaggcttatacccttgtcagggaacgatggatatttgccagcattgttttaattttgtgattctaatactttatcaatggccctgatttgttttgattcctttatttagttggttctgattgttcaagcctttaaggtctaggttagatagtttggcactttgcccaaataagaaaaaagaactatcgtgaaaaatatgtaggttttatatgatattttttatttggcaattttgtgaatttctgatttaggtaatatagcaatacaatttgttgccaactcatcaatcattaacatggacaataattacatgtatcttttcatcccaagtccagcaaattacctaattttttgatactttgattcatggtcatttatcaattcatacaagtgatctgcctctcttcccttgtgatatattgcttaacatgtttatcctctctcattgtgcaaagagtgctggcatgttggagtctcatgtgctcaagaaggtcagtcacgaagaagaaaggggcaacttcagtgcagtctccatagcagatattgatcgcacaatgaagaaatatgctgataacctgctacatgcactggaaagtgtaagctcaaggctatcacagctagagggcagaacacaccatcttgagaactctgttggtgagttgaagctaataattggtaactacaatggcagcactgatggaaaactgagacaatttgagaacacactgcgtgaggtaagcttccctctcttttactgttagacaatatgctgtaatatctgaattggtaaccaatttatggatttgattatcaagaggtaaagtaagtaaccaatttatggatttgattatcaagaggtaaagtaatttagttttctattgagtaacagtagtcttttctttaccttcccatgtgaaatgctgctatttttatttttatccttttgagagaaaaaagctgaagccagtattctaagtttttgtcttcttttttgtgtatttatatgaatagtaaaatgtacagcttctactttaccctgtcttggcttatttgattattaatggtccatagcttcacatgccctagctgggttgcgacattggttatagttactatttgtgatttaaaggacaataacatgagcagggagctaatatgtaccttaactgagtttattctttaactataagtatatgcagtttgcctggtgttgtagtctttaagttgtgatataattgtcttgaacattactaaaaactgcttatttggttctaatttgtattaatttgttttataccattgtgagggcatcccgtatcttactatggcatgtgctacgtgtaggttcaagctggtgtgcagattttgcgtgacaagcaagaaattgttgagacacaggtccaactttcaaagctccaattgtcaaaagcagaggatgctcaatcagaaaaggctggtgttggtcaggcagattcaaggcagcagccaactctaccccaacctcagcatcaagcccctccgccttcccatccaccggcattgcctgcccttcctgctccaaatgcaccacctccacctgcaccccaaagccaacctccatcacaattcccaggccatttaccacattcccaggtgcaatcagtcccacctgctccaccgactccattagcaccaaccataccacaggagtcctactatcccccgtcagcagtacagccaactgacaccacacaccagcagtatcaagctccacccgccccacagtcgcaggcacctccagcaccaccacagcattatcaaacaccacctcagtatgctcagtattctcagcctcctcctgcaagtgctaacccctcaactgcagtcccaccgtcagtgcatcagcagcctgaagaagtagcagcgccgtatggccctcctcctcagagctatcccccaaatgtgcgcctgccatctccttatgtgccaccacctagcgggcctgcacctcctttctatggtccaaaccctggcatgtatgagcctccagcagtccggccaaactccgggccacctccatcctacaatactggatacaaaccacagggtggaggcggtttccccgagccatatggttacagtggatctccatctcaccgtggcaatgctggaatgaagtcgccctcgccgtttcatccaacaggctctgcgggaagcggcaactacagcaggctccctacagctcaaatgctgccccaagccgcgtcagcgagctccaccccaagcgcctcctcgggcaacagggtgccgattgatgacgtggtagacaaggttgccacgatggggttctcgagggagcaggtgagagcggccgttcgccagctgaccgagagcggtcagaacgtcgacctgaacatggtgcttgataaggtgatgaacggcgccgacgcccagccccagagaggctggcacgggcgttaaaagctcagctgctatccagggccatgaagcgctctcccatcaacctgtgcatatcactgaacatccaatccacggagtcattttgtgcattcgcgtgaacgtcagattcggaattcatattgtcgatttggtggggaacagaccaggtctgctcgatttgctgttggtgatcttacagcaagtgttctttatctctttgattcgcctggtgttggttggtactagcagtagtactaaaacttggtatctgatctccaaaaacgagtttttctagagatggtgttatggttgttatccactgatgatatgttaatgattcacgggctgcactgttctgtttaactagtcacgctgctaagctgccttccagtttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0169400, RefSeq:Os05g0169400