Os04g0346000
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os04g0346000 |
|---|---|
| Description |
Prolyl 4-hydroxylase, alpha subunit domain containing protein |
| Version |
NM_001059046.1 GI:115457821 GeneID:4335530 |
| Length |
6822 bp |
| Definition |
Oryza sativa Japonica Group Os04g0346000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:16470472..16477293 |
| Sequence Coding Region |
16470619..16470691,16471533..16471580,16471890..16471942,16472904..16472969,16473180..16473254 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:16470472..16477293 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:16470472..16477293 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggatggcgcgggcgcgggcgcggcggttgctgccgctgctcaccttcgtcacgctcggcatgatcctaggctctttacttcagttagcgtttttccgccggatagatgatcactcaaatgtaacacatttggagaatgatcaagaagcagcttttctccgtctaggattggtgaagcctgaagtcatcagctggtcacctcggataattgtcttccataactttcttagttctgaggagtgtgattatctaagatcaattgctagaccaagactacagatttccactgtagtggatgtcgcaacaggaaagggtgttaaaagtaatgtccgtacaagttctggtatgtttgtgagttctgaagaaagaaagttaccagtcattcagtctatagagaagaggatttctgtgtactctcagatacctgaagaaaatggagaactcatccaagtattacggtatgaaccaagccaatattacaggccacatcatgattacttttctgacactttcaacatcaaacgtgggggccagcgagttgcaacaatgttgatgtatttgactgatggtgttgaagggggtgaaacccattttcctcaggcaggagatggtgaatgtagctgtggcgggaagatggtcaaaggattatgtgtcaagccaaacaaaggagatgctgtgctattttggagcatgggactcgatggtgaaacagactcaaacagcattcatggtgggtgccctgttctggaaggggagaaatggtcagctacgaaatggatgaggcaaaaagaatttgtttga</cdnaseq> |
| Protein Sequence |
<aaseq>MGMARARARRLLPLLTFVTLGMILGSLLQLAFFRRIDDHSNVTH LENDQEAAFLRLGLVKPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVA TGKGVKSNVRTSSGMFVSSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQY YRPHHDYFSDTFNIKRGGQRVATMLMYLTDGVEGGETHFPQAGDGECSCGGKMVKGLC VKPNKGDAVLFWSMGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEFV</aaseq> |
| Gene Sequence |
<dnaseqindica>148..220#1062..1109#1419..1471#2433..2498#2709..2783#3337..3411#4542..4612#4702..4753#5465..5554#6363..6455#6594..6701#aaaaaaaacattaaaaaaaagagaaaaaaaaggccgaggcgaccgggccgcggcccgactccggcgaggtcgtcgaccaaggccgccgagattcgtcgggatttctcgccaaaaatagcaaaggcggcggcggcggcggcggcggggatggggatggcgcgggcgcgggcgcggcggttgctgccgctgctcaccttcgtcacgctcggcatgatcctaggtgagtcgccgtcgtcggctagctagctctgaggaggagcagcacgcgcccgtgtcgatttggggatcagggcgagctctgcctcgccgccgtggggtgctccgcttggttggtttggttgatgcattttttgggggcgggggctgtgttcctcactgtggccatgatttggtcggcgactgatggtttggggtgctgggctgagggctgaatctgacacgcttgggtttgctggatttgatgggaaatagcctgaaaattttgccagttcgtggcttcctgcggctgcagtggaagcatggcaagtgtttggcatggcggcccagtgcctgttgacttgttgccatccgcatggatttcatgatgggcgcagggatgccagccattgtcacttgtgtgtgagccagtggtaagggctagttggtgtgctactgctaatgagctttgattggtctggtttctggtctcgcatcactagctggaagctacttaagtttgagcctacatggtggtgcatgccgtagctcaacatatgagcggtcgaaataattaagctgtacttattcaggtgttcacggtcttatggtactggagcatccgattcagcacagtgtgtcctagcaaattcaagtaaacactatatttgcctttagttttatctgttctggacgaaagattaggcctactgggtcattgagtatagtttatttccattttgctcccttttctgcaaaccttggcactttatttcaattagtattgccattggtcgcgtacaaatttatatgtgctgcttcaatgaaataattgtctcatcttgctttgttctacacaatttcaggctctttacttcagttagcgtttttccgccggatagatgatcactcaagtatgtctatcctcccttttatttattgcattctaataatacatgcgtgcaccttctcctccctctacttccaatataactggaacaaccttgtacttgtcttttgtggcattatgcatatgcttgttattgctcaatccatgtcaaacgaaaaacttttttagtgccagcaattcagttgagcatagggctgcatacctgcatctgagtaaatcaaaatccagagaaccatcaattacatgctatacactttactagtctttcctcggtgattgtgtgtaaccaagcgtgaggcgttctgcatggcagatgtaacacatttggagaatgatcaagaagcagcttttctccgtctaggattggtatgtaatgctactttctgaaatgcttgaggcctaatctgtatatatgccaataattttttttgtaaatttacaacacaaacatcagataaatttggggatttgaagtctattaggcaagtttgaggaataaactgacagtggaaagctagtcttagctttgtttacttctttatatattttgtctattttctacaagtggccagataaaattgacttgattcgtttccaatttcgatatttattaaaaaaaatgagcttcttatatgcgcaaaagtgtgtctgttcattttcaatatcatcttgtgttgtgtgctctggaatttaactgggttttgatcatgttacatgataaaaagaaaattatatctatcaactgcttaatttgcaaaaaggctagcaagttgatttggttcatatgcaattggttggaaaataacagagatgaaatgtcaagtatgatggttcctccattgattatgcatgcagttatgaagtgaactgtgatatggaataggttcttagaactttcttttatcaatataatagatgtaaatttttaatgattgatcaaataggatatagctctatatgtagatgtagaaccatgtaaagctttgttgtgaggtttagcttgagatgtaggaacttttctaaacctttattctgacagggtttagaatctactgaaattgttttctttttttaaaaaaaatggaagaacattctctcagcctctataagctgaaataaaaattttgttcttctttgttgcaagattgtatatcttttgttgaccaatgagcatccattcatgatatggtgtgttttatcagtttcactttgtatgggcaattgagcacgttatttttaaccttttttagtcttcttttgcaacttaatttgtagcaggctcaaaacacaaaaaatctaatgacttcaatttgttcataatctgtaggtgaagcctgaagtcatcagctggtcacctcggataattgtcttccataactttcttagttctgaggttgggccctgtctcttgtagtttggtgttgctaaatatttttcatcagctcttgtatttggtgactcaggcatatacttcccttgctatttgcatgtatccaaagaaaaactgtaagcccaggcaacaacattatatgcataaaccaccaatctggtggacaatggccaaaatagttgttgctgagtatacttgtgctaatctttgcaggagtgtgattatctaagatcaattgctagaccaagactacagatttccactgtagtggatgtcgcaacaggaaaggtacatttcttgccttatacttagaatgtggaatgtctcttagtatctcaatgttagatagctattattttctataatagttgctttctacttcatagcaagtggaaggtacattctctttgtatctaaatattagatagctattattttctataaagttagtagatttataaagttcagatgatagttgataatgtatttctttctttttctatttctaaatctttgtaaaacctttgtgtcaacattcctctcttcatcaaggttgaggaaaaaaaagtttgagcattaatacgatctatttttttggagagaaaactgaggtttttctttttattgtgtgatctgctttatggaaccattcgtaatgtttattaaacgattatttatagctcatatttctcaaatggttctgaggattttgctgttggcaatcatagaaccctcatctattgggtttttttgtagttctctatttctgaaaccccggaaatatttttcatgtccttttaatatttcggttattgctaacttggcatattttgtggaacagggtgttaaaagtaatgtccgtacaagttctggtatgtttgtgagttctgaagaaagaaagttaccagtcattcaggtccgttcatcataccccaactgtaggtgccttactccttgccgcttattgcttcatgtgaaaaattccctttatactgttgagagaaataacttggtcttctcaggatatgtctgtactgcaacaaattactttgtgagggggggggggggtgttaattggttgttaagttgccattacttgacaccacaaatacaagagtatgtttattgggtggctagaaacgggtcatcttctcttcatatttcataagtttgacataaaaaatgatattatcattcgtttcctaaattgactgcattgtttagtttaaaatcaacatacaaaatgggccacacctagactgccatttaactactttgtccttttcttttatctgttaggtcaaaagaagaagaatgtatgagattttcctcgctcctaattttagattcaaactaaggtactagtacatcctatttagaaattgaaccaaaatttggtactgatataattttgcgattatttattatttgtctattacaacgtcaaaataaaaccaaaaccatggacctaaaaggttatgtagaactaacataccttttgtatcaatgcaaaagttatgctaatagaatttgtagcttctgttcgtgttgccaaaagtaccagcaacagcacatgacatatacttagaaatatttttggcggcaatgaaactctgattcctgacatggtacttatggatcaaactgtttccttttatggcatggtccctctaacaaaaaatgtagcttgtgtttattcctactccaccaatgtcaactactcacttaatgtataaaatctgacaaattccctgaactactgcaatacagaagtagctgacatatatttatgttatatttctgtggtaatcctgaaaaattttaacggtgcattttaatgcaccgttaatggataatttcacaggaaattttggcttttgctgacactattacctaattatgctatcaaattatccaacaatgcatcatccattgctttaaattgcccttgtcacatgttcgactgaaatctgtgtcagtgggtttaaaccttagtagttgaatacttcattcttctatcattaatgtttgctttgctttctccagtctatagagaagaggatttctgtgtactctcagatacctgaagaaaatggagaactcatccaagtattacggtactagaataaccgacagtattttttcccctaagttctttgccttgattattaatcaatcattttcaagctaacttcaagtactacaggtatgaaccaagccaatattacaggccacatcatgattacttttctgacactgtaagttgaactccctttatatgctatggagagcagagagctatagtttcctttgccgtcactaggctagtcattacctccgtttttaaatagacggcgctgttgacttttggatatgatgtttgaccattcgtctgttcaaaaaggctatgtaaatatcatttatttcattattccttgttttatcattaaaggtattttaagcatgacttatatttttgcatatttgcactaaaattttaaataagatgaatggttaaacgtcatgtccaaaagtcaacaacgccatttatttaaaaacagtgggagtagtagtagtagtagtacatttaaccaaggaaaaagcccacttttggcccttcagctctttctgtcgacaatgaaggggaaaagaggaaaaggtggctaacatgttaaacgtcttatgaattttcttatccaaatcatcatctatagccagctcaagtgccagctaagatgacacgtcaagcaaaaatgcccacaagatctactttggggtttgatttgacgagttttgatgttagaaaatgtaataaagttgggtttgaatttagggtggattagtgggaactatagtctgaaaagcttagagaccaagagtgcatttttcatttaactagcaatgcaaatcaataaaaccatcccccgcaaaaaaaaaaatcaataaaaccatgaatatttaatctgcagttcaacatcaaacgtgggggccagcgagttgcaacaatgttgatgtatttgactgatggtgttgaagggggtgaaacccattttcctcaggttagctgaattatactgacatagcttcttacaatatcaaaagctctgtacatttttcttctggttcagctttacttatgtttgctcatttatgccatagttctttccttggatcttatcagcacaaaatgtggtcaagtgccactctttgttgtgcagcacattcacgctatcttttttatttccatgtttctcttgaatatgtaaaaattattgaaacaatttatgaacatgtatctgttgtctatacaaaccatgtgatactagtatactattggttatcactgagcactgtagctgtctggaaaaatttttcctggctaacaaaagcgccattcttttttggcatactcctaagtcatagctgtaccagcagataactttttcatgcttcaagggaaactactgaatccactggaggaattggttgtgttgattatggtaacatcagcttacaactcgacctctgtgctctcatatggccacaataactgcattggcaatgtggaatgcaatcctaagaacaacgcaatatgtaattggcctcatagttgatctgtcagatgtttaaggcccttgagttcaaattatctttgaatctcatttttaggtgaataaccctttgcatgagcaatttgcagccatgctttcccagccttaggttcttctttcctcgtttacacatcttctgatacatggcatgatgtaacatgtcgtggggctgcttcatccgtctttgtttagcttttatgttatatgatttgtggtgtgcttgcctgatattctgaatttatcacctctgttccaggcaggagatggtgaatgtagctgtggcgggaagatggtcaaaggattatgtgtcaagccaaacaaaggagatgctgtgctattttggagcatggtgtgttataatttgttctagataaagcatgaaccaaaacacattccattgtcattagatccagatattttcttaaattgtcagtgctccgttagtcaactaatttcttcggcttccatgctaatttgattgtttcagggactcgatggtgaaacagactcaaacagcattcatggtgggtgccctgttctggaaggggagaaatggtcagctacgaaatggatgaggcaaaaagaatttgtttgagcgaaagatgaggcgaagaatgatgccttctaatttctggctatgcagatatggagctatattctttctattatatgtaatgaaacgtttcaggaatcttgcaagcatatgaaagttcaat</dnaseqindica> 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