Os04g0354400

From RiceWiki
Revision as of 19:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0354400

Description

Male sterility C-terminal domain containing protein

Version

NM_001059075.1 GI:115457879 GeneID:4335561

Length

1714 bp

Definition

Oryza sativa Japonica Group Os04g0354400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16952509..16954222

Sequence Coding Region

16952509..16952524,16952712..16952907,16953010..16953171,16953527..16953608,16953679..16953945
,16954091..16954222

Expression

GEO Profiles:Os04g0354400

Genome Context

<gbrowseImage1> name=NC_008397:16952509..16954222 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:16952509..16954222 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatcgagaaatcttatgttgctggtgagcaagcaggcttgttacttgagaaaccattccaaattggtgaagcactacgacaaggttacaccctagatgttgaagctgaggtgcaattagtagacaggatcaagtcaaaactcagaataaaatcttccattcacaacaagttagaaaaaacaaccatgaagaaacttgggcttaaaagggctatgcactttggttggccaaatacatatgtgctgacaaaagctatgggggagatgttacttcgacaattgggaggagaccttccagttgtcatcgtccggccaagcataataacaagcacttttcaggatccaatgcctggatggatagaagaaactaggacaattgatgccatatttgttgcctacaatgaccaaacccttccttgttttatatttgatggtagtgttatatttgacctgataccaggagatatggtgattagtgcaatgatggcagccataaatagtcactggaataaacaagctcaagtgatataccatgtgacttcggctcaccaaaatcccatacaattatctcttattgaagaatcgatgtacaaatacttccacacaaatccacgtacaaataaagatggggagagcataaaaaacaaaagagttttaatgttcaagagattcgcatacttccaggcatacatggctctacggtataagttgccattagagataatgcgtgcagcaaatgcactgttcggagggatatacaccaagaactacaataagcttaaccgaggctataacattttaatgactgttgcaaagctgtatgctccatatgactttttcaaaggatggtga</cdnaseq>

Protein Sequence

<aaseq>MGIEKSYVAGEQAGLLLEKPFQIGEALRQGYTLDVEAEVQLVDR IKSKLRIKSSIHNKLEKTTMKKLGLKRAMHFGWPNTYVLTKAMGEMLLRQLGGDLPVV IVRPSIITSTFQDPMPGWIEETRTIDAIFVAYNDQTLPCFIFDGSVIFDLIPGDMVIS AMMAAINSHWNKQAQVIYHVTSAHQNPIQLSLIEESMYKYFHTNPRTNKDGESIKNKR VLMFKRFAYFQAYMALRYKLPLEIMRAANALFGGIYTKNYNKLNRGYNILMTVAKLYA PYDFFKGW</aaseq>

Gene Sequence

<dnaseqindica>1..16#204..399#502..663#1019..1100#1171..1437#1583..1714#atgggcatcgagaaatgtaaatactaatgaatcgcttgtttacgaagaatgactagtagcatgtttaaatggatgataagtagaattacttatccttggtctatatgccaaaatgaaatatgactatcaaaaataaatagagggagtaccatattatggaggttctaatgaaagaggtgatattatcaatttgttatgaacagcttatgttgctggtgagcaagcaggcttgttacttgagaaaccattccaaattggtgaagcactacgacaaggttacaccctagatgttgaagctgaggtgcaattagtagacaggatcaagtcaaaactcagaataaaatcttccattcacaacaagttagaaaaaacaaccatgaagaaacttgggcttaaaaggttttatagaagaatcatattttttatatatcttgacgccttgaaataatgtcatgtgcatgaatattataacatgatctacttgtgatgaattttttgaagggctatgcactttggttggccaaatacatatgtgctgacaaaagctatgggggagatgttacttcgacaattgggaggagaccttccagttgtcatcgtccggccaagcataataacaagcacttttcaggatccaatgcctggatggatagaagaaactaggtggatatattccagtgtattatacaccacagccttgttgctacactaaattaattattaattgagaaataagtagtatttgagaaatttaagaatcttatggaggtgtttagctgtaccatattttccagtttattttttttgccttgggtactaggaggtatcttctttttaggtaataggttgtacctttcattggaccgaaaaatctttcttgtcagttcattgccttaactatttgtgttttgtaaaaaagaagcatatgttgtggtaagtgttaatatttgcactaggagtgtgttgtcttactagtccaattaatgaaatatttagatgctacaatcttttattgcaggacaattgatgccatatttgttgcctacaatgaccaaacccttccttgttttatatttgatggtagtgttatatttgacctggtgagtatttcccaaccaaattatagcaaattcatatatttttatttatgaaaaattttaaatttcacagataccaggagatatggtgattagtgcaatgatggcagccataaatagtcactggaataaacaagctcaagtgatataccatgtgacttcggctcaccaaaatcccatacaattatctcttattgaagaatcgatgtacaaatacttccacacaaatccacgtacaaataaagatggggagagcataaaaaacaaaagagttttaatgttcaagagattcgcatacttccaggcatacatggctctacggtataagttgccattagaggtacgagcacttcatacttctcttgattaattagttccacaagtctgtactatatgtatctacacatgtcaattttttcccgtattttcttacaaatttataaaattttctgacttcggcatgttgatcttgtgataataagcagataatgcgtgcagcaaatgcactgttcggagggatatacaccaagaactacaataagcttaaccgaggctataacattttaatgactgttgcaaagctgtatgctccatatgactttttcaaaggatggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0354400, RefSeq:Os04g0354400