Os05g0173500

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0173500| Description = Conserved hypothetical protein| Version = NM_001061317.1 GI:115462364 GeneID:4337952| Length = 5374 bp| Definition ...")
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Gene Name

Os05g0173500

Description

Conserved hypothetical protein

Version

NM_001061317.1 GI:115462364 GeneID:4337952

Length

5374 bp

Definition

Oryza sativa Japonica Group Os05g0173500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4381268..4386641

Sequence Coding Region

4381509..4381681,4381769..4382648,4382735..4382920,4385094..4385195,4385272..4385313
,4385415..4385510,4385588..4385680,4385793..4385912,4386022..4386054
,4386141..4386191,4386316..4386426

Expression

GEO Profiles:Os05g0173500

Genome Context

<gbrowseImage1> name=NC_008398:4381268..4386641 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4381268..4386641 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaagaagccgtcgctgtcgcgggttgcttcagagacgcggctgctgttttctagctgggaacctgaatccccgttggatgctaccagcggatccggaaaagatgcacccgccgatcaacaggaaggcgacgggaagcggggccgacaacgctcgcctggtgacgaagcgaggtcattgaaggatcgattcaagggtcgattgaaggagggcgttgcttcagcccgattgaagtgtttagacacactattgaatgagtcgagggatttatcgcaggggaatgagtccaaggggaatttgttgaagagcctcattcaaaaggcagagttggatttgtggcaggtgaaggaactggaaaccgatcccacgtccggtgctagccaatccaaagaagaagcttctgctgcagcttctgatggacagggagacgataaggaaaggggtgacttgcaagcagtcgaggcctatggttctcctcctggtaaggagaaggttgacttgcaagcagctaaggactcttctcccactgctgggaggaagggaaagggcaagcgtattatagggtatgaagcacaacagaaggaaagcaacattcaagatgttaaaacatcaagtcaacaagaaactagaaagccaaagaggaagaagcagaagaagaggcagaggcgcaagatggaggaatccacggaaaatctatcatgccgcagtggcagcagcccatcctcttctcatgatgcaacaagcacatcgacaatagagggggagccagaacaaccatcttttggggatcttgcgagcattgcacaagaccatgatgacaagattgcatctgacgttgttgacatcaaacaagaacaagaatcagcagaagatatcctagctctcctcgacatgatggataaggatgccatccaagaaaaattcaattactatctcaagcagctgggctttgagtcaaatgagtatgatttttggtctgaaacctatgagccagagcaactcactgcgttgcacgagcggttagccatctaccgcatcgtaggttatgagctatcaaagggtaggaagcttggcaaacaggatattgcaaaactgaaagagcagtacaatccgtccattcttcgtaaggaaggatacttccggcactatgaggagagtcttgagtggtacttcgatcttgaatggtgcaagtactctggttttcaagactatcagcggctagtgcttcatgataatgttgagttcttagagtgggagcattaccacttaaattataatacctatgaggatgatctagcatatgtcaggtatcgtgcacgcttagcaaatgagactaagtggattgaagattatctggcccgtgacataactcaggctgagtggcgtagggttaaggatatagcttcagttcaagcactgaagattgcaagagtctctggtggtgtcaaggcacaggcagctttggctggtttcagagatcatatatggagcattcagtttgatttcaatcactataaggattttgatggtgtttacttcaagatttggaagcgggttgctaagagaaagatgaattttagagaagctttgttggaagtgtatagagaagatatgtttcctgtgcgcaagaatggtattaagtacgaacttgataatactcaactaagattcaagtcgatgaaagaaaagtatgatgcccacgtggcttgccttgatgagtcggtgccagaagatgaagttcgtcagttgatcaaagaggccgttataaaaatgaaaccaaaaccacatacctatttggactacgccaggaagaagttacagatatcaatgaatatcgatttgattaccaaaagtacgtgtactcttctcaattatcaaacatga</cdnaseq>

Protein Sequence

<aaseq>MPKKPSLSRVASETRLLFSSWEPESPLDATSGSGKDAPADQQEG DGKRGRQRSPGDEARSLKDRFKGRLKEGVASARLKCLDTLLNESRDLSQGNESKGNLL KSLIQKAELDLWQVKELETDPTSGASQSKEEASAAASDGQGDDKERGDLQAVEAYGSP PGKEKVDLQAAKDSSPTAGRKGKGKRIIGYEAQQKESNIQDVKTSSQQETRKPKRKKQ KKRQRRKMEESTENLSCRSGSSPSSSHDATSTSTIEGEPEQPSFGDLASIAQDHDDKI ASDVVDIKQEQESAEDILALLDMMDKDAIQEKFNYYLKQLGFESNEYDFWSETYEPEQ LTALHERLAIYRIVGYELSKGRKLGKQDIAKLKEQYNPSILRKEGYFRHYEESLEWYF DLEWCKYSGFQDYQRLVLHDNVEFLEWEHYHLNYNTYEDDLAYVRYRARLANETKWIE DYLARDITQAEWRRVKDIASVQALKIARVSGGVKAQAALAGFRDHIWSIQFDFNHYKD FDGVYFKIWKRVAKRKMNFREALLEVYREDMFPVRKNGIKYELDNTQLRFKSMKEKYD AHVACLDESVPEDEVRQLIKEAVIKMKPKPHTYLDYARKKLQISMNIDLITKSTCTLL NYQT</aaseq>

Gene Sequence

<dnaseqindica>242..414#502..1381#1468..1653#3827..3928#4005..4046#4148..4243#4321..4413#4526..4645#4755..4787#4874..4924#5049..5159#cgattcgattcgcatcccgtctactgaccacacacggccggacggaagacccgaaccgtatcgcctccacaatccatcccccagaaccataccacgcgttcccgttcccctcctaaatactcgatcaatatcaatcaatctccgccaactccctcgaatcgctcctgaataacttagttttctcttgttagattagggtttcgagtctttcgacgtcctgcttgcttgcagggagattctgatgccgaagaagccgtcgctgtcgcgggttgcttcagagacgcggctgctgttttctagctgggaacctgaatccccgttggatgctaccagcggatccggaaaagatgcacccgccgatcaacaggaaggcgacgggaagcggggccgacaacgctcgcctggtgacgaagcgaggcctaagcggcagcgcaagacgaagaagaagaataagaagcagttggatttattggagcgggaggacgatcccctaatccaattgaggtcattgaaggatcgattcaagggtcgattgaaggagggcgttgcttcagcccgattgaagtgtttagacacactattgaatgagtcgagggatttatcgcaggggaatgagtccaaggggaatttgttgaagagcctcattcaaaaggcagagttggatttgtggcaggtgaaggaactggaaaccgatcccacgtccggtgctagccaatccaaagaagaagcttctgctgcagcttctgatggacagggagacgataaggaaaggggtgacttgcaagcagtcgaggcctatggttctcctcctggtaaggagaaggttgacttgcaagcagctaaggactcttctcccactgctgggaggaagggaaagggcaagcgtattatagggtatgaagcacaacagaaggaaagcaacattcaagatgttaaaacatcaagtcaacaagaaactagaaagccaaagaggaagaagcagaagaagaggcagaggcgcaagatggaggaatccacggaaaatctatcatgccgcagtggcagcagcccatcctcttctcatgatgcaacaagcacatcgacaatagagggggagccagaacaaccatcttttggggatcttgcgagcattgcacaagaccatgatgacaagattgcatctgacgttgttgacatcaaacaagaacaagaatcagcagaagatatcctagctctcctcgacatgatggataaggatgccatccaagaaaaattcaattactatctcaagcagctgggctttgagtcaaatgagtatgatttttggtctgaaacctatgagccagagcaactcactgcgttgcacgagcggttagccatctaccgcatcgtaggttatgaggtatctctatcaacaccatgagccaatttctttgtattgtagtctaatgcatctatgtttagttactctctgattctatgttgcagctatcaaagggtaggaagcttggcaaacaggatattgcaaaactgaaagagcagtacaatccgtccattcttcgtaaggaaggatacttccggcactatgaggagagtcttgagtggtacttcgatcttgaatggtgcaagtactctggttttcaagactatcagcggctagtgcttcatgataatgtaggtatcaacacttgactcctccatgccagctagtttactccctccgtcccgaaaaaaacgaatctaggacgggatgtgacacattatagtacaatgaatctggacaaaggtatgtccagattcgtaatactaggatgtgttacatctagtactaggttgattttttatgggacggagggagtagtgtttatttttgtctgtacttgtgcaaccacatgttttgccatacccatgctaccacaacttaatttaactttacaagttggttacatcttttatgtttgtttttcttatataagtacactccttttaatagttgcactcaaagaaaatattgtaaagcttaaagcttaggctagttatctgcatggttgttatggcgtcgctatggcgtcgctgtagcgtcgctatagcggtaaggcggttgcagaggtcaaggcgtccactgcgccttatgtttcctccgccttagaggcaaaacgagtagagaaagggaaagaacaggaaaaaccagtagagaaagggaaggaagaagaggtaagctcatcatggaacctagttggcttgtagagaaagagaaagaagaagtggccagagacattgatggcggctggtgcctcttctcgtcatggcggctgatgcctggtggcgtacgatgtctcttagggcataaaacacgtgggtatgaagactaatgttggtctttggtgggctggttgcctggcttagtgggccttttaccaatttcctttttttttcttcctaatttctctaccatatcctccactaatcacgcctcaatcatctcataaggcgtcgcaacgccctacgcctcagcgctatggtgctaaggcagtggtgggtcgccttaccgccttaacaacactggttatctgttacaatcttttgtagtatgttctttcagtgactgaatccacatctcctaattctcatccgtttgtcttagcttcataatctattcccataatttatggatgctgatatgatttgacctttgttgaatttgtttgtacccggtctgtttccgccccttaggccttagattttatcctaatcaatgtagtgccattccctgcaagatatcatgcacataagcatcctgttcatttattgcgtggagaaatggaatcatactaatgctgtttgttcctttaattcactgcttttatttaacatgatgctgttctcttttatatatgttgtttttgacatcaatagggtctgcaatacgaaccaatgcatgtgtttaaccatttttttctaattagatgttttcaaaagttacaactaatgatatcaaagttttgaaatgtttgactgcacatgttctagaatgagatgaaaagcaacatagcaaatatttgatactttattaatgctttttcttggtgcttgttatgtcattatgattaatattggaagactggagtaacccagaatactctaaaccgtaatggttttgatctgagtccgaccagagtaatgaaatcgtgctttaaaattttgtttcgatgatcagaatccaaacctaggatatctaagggatgtgccactacccaataatcataaccaggctggcagttctagtctgttaatatttgtaatttttgacagggatggcgacaatgcatgcagcttgtagtaattaaaactaattgctgattccctttcccatgttattttcactccactccaacttgtgatatgatgagctgatgttggaaaggggcatattgttcttaacttacatagttatgtacgatagccactcttttttattacatttaccaaactagtggtctggccagggaaccaagccactaactagatctatctggttttgataattacactcattatcattttgtgatcatggataaatacattgtttccattggttatttggaccaagatcatgttgttaagtagtatttgcatatgaacttgcattttgtcatgttatctgcaaactttagcttggtagttcatgtcatatcgagtagctgatggaaatttatttgcatgttggcattctatgatagcaagtgcccatatttctgcatttgtaatgttcttgtaacgatggttcttaggttggtacaggtatccctgtagatgtacaattaatggtcgatgtacttttgtgcaggttgagttcttagagtgggagcattaccacttaaattataatacctatgaggatgatctagcatatgtcaggtatcgtgcacgcttagcaaatgagactaaggtatgattgaattaatcaaagtgctaagtactggtcatatatcatctttttctgacagcctttatttacgtgatagtggattgaagattatctggcccgtgacataactcaggctgaggtaggatccaaaagccttttgcacctaataaactgttgtgcaatgcatatttatattataagtcccacaactcatgcatgacaattgtttccattgtttagtggcgtagggttaaggatatagcttcagttcaagcactgaagattgcaagagtctctggtggtgtcaaggcacaggcagctttggctggtttcagagtaaaacctcttctcttgttaattttaggtggagagtgtaattgtaatagtgtttaacaatactattttaaaatcaggatcatatatggagcattcagtttgatttcaatcactataaggattttgatggtgtttacttcaagatttggaagcgggttgctaagagaaaggttagattgcctcagtatgcacagcaagcaacttatggtgctattttcttttgtccattccttgcttgttaatgacatataccttcttttttaaaatttcatcttttattagatgaattttagagaagctttgttggaagtgtatagagaagatatgtttcctgtgcgcaagaatggtattaagtacgaacttgataatactcaactaagattcaagtcgatgaaagaaaaggtatgttcctcttctcagttttactgcattgttttgcccttctttgttggatatttttcaactcgtcatccatccatataatttcttctcttttgttcctgttgtccagtatgatgcccacgtggcttgccttgatgagtcggtaagcatgctttgcttagattaatataataatatatatccagctggagtatgttgttcatattgatgaaacttctatgtttgtaggtgccagaagatgaagttcgtcagttgatcaaagaggccgttataaaaatggttagttgatttatttccctatcatataaatgcacgctgtctagtttactatgggtctatggcgttgagtaacatcttgaagttgggtttatttgcttatgtggagattaatttttatcttcagaaaccaaaaccacatacctatttggactacgccaggaagaagttacagatatcaatgaatatcgatttgattaccaaaagtacgtgtactcttctcaattatcaaacatgattcaatgctaatcaatgccgtttgaaagaattttagctttcttagtctgagaaatatgtctttcgtttgaattcaataactagtaatctgtccgtgctaatgctatggtgacatttagtaatcgtctgcatgtaacgcttatcatcatgaacataaattaatttgaacatttgcaagaatctgattatcgtttgaaatactatcgatgcatagac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0173500, RefSeq:Os05g0173500