Os05g0176000

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0176000| Description = Fibrillarin family protein| Version = NM_001187311.1 GI:297723752 GeneID:9266224| Length = 3167 bp| Definition = Or...")
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Gene Name

Os05g0176000

Description

Fibrillarin family protein

Version

NM_001187311.1 GI:297723752 GeneID:9266224

Length

3167 bp

Definition

Oryza sativa Japonica Group Os05g0176000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4538636..4541802

Sequence Coding Region

4539411..4539620

Expression

GEO Profiles:Os05g0176000

Genome Context

<gbrowseImage1> name=NC_008398:4538636..4541802 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4538636..4541802 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctgttgtttctgcttttctgctatgtacagaatgaggatggaaccaaggttgaatacagggtgtggaatcccttccgttcaaagttggctgctgctgtgcttggtggtgttgacaacatctggattgtaagtttcttggttgaatccacgtgtgcaactttatgcttaagtggtttaaaatcactgtggtttgttaatgctgtagtataa</cdnaseq>

Protein Sequence

<aaseq>LLFLLFCYVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIVS FLVESTCATLCLSGLKSLWFVNAVV</aaseq>

Gene Sequence

<dnaseqindica>776..985#tccaaaaccctaaacctctccccctcacctgcggcggcggcggcggcggcgaagcacctcgtcggcacgacaccatgaggccaccgcgaggtaagcaaccacccgaaaccctaggattcatctcgcgctcgattccacttccacccttacacgatgctgttctgcgtcaggcaggggattcgggaggggaggaggagggagaggcgatggcggcggccgcggcggcggcggtgggaggggattcgggagggtcggggacagcggcgggagaggaggccgtggtgggaggggaggcaggacgccgaggggccgtggcggcggccgcggtggcggcgggaggggtggcatgaagggcgggagcaaggtggtcgtggtgccgcacaagcacgacggcgtgttcatcgccaaggccaaggaggacgcgctctgcaccaagaacatggtccccggcgagtccgtctatggcgagaagcgcatctccgtccaggtcctttgctcttactccctccatttttttttgcgttctacttatttagtgttttgctagaactgtagtatgattgtattgtactgtagcaagctgtaagatgttgcaatgttgattctatgcagtgtacacagattatgttcaaatcgtgctagaactgttaggataatttagtgcgctgtagaaagctgtaagatgttgcgcaatattgcttctttgtagtgtgatacaaagattgtgtacatgacgcttgtttctgttcatattgatctgttttattgtacatgactgttgtttctgcttttctgctatgtacagaatgaggatggaaccaaggttgaatacagggtgtggaatcccttccgttcaaagttggctgctgctgtgcttggtggtgttgacaacatctggattgtaagtttcttggttgaatccacgtgtgcaactttatgcttaagtggtttaaaatcactgtggtttgttaatgctgtagtataaaaaaatgcatcaagtgttaatgtttgcatcatgattttaggctcctggtacccgtgtgctgtatctcggtggtgcctcaggaacaaccgtgtctcatgtgtctgatattgttggaccggtgagatctcatttactgttctcatttattattcagtcacctaggtatgcaattttgccattcgctaatcaagtcattttgcagaccggtttggtctatgctgttgagttctcgcacaggagtggtagggatcttgtcaacatggccaaaaagaggaccaatgtaattcccatcattgaagatgctaggcacccggcgaggtaccggatgttggttggcatggttgatgttatcttctctgatgttgcccagccagatcaggtatacctttctcacaatgatttcatgatcttgaaaacgaccttagataatttattatatggttactagttagtattcattaagtgtgtgacaatggttttggtgacattctttgattacttgcgggctgcaaatgatgagcttactcggattccccttcaggacatcaaattggatgatgcagattcgagtttctgatgcattaaagcccattaccacctgttttttctttgctgtttttgcctgctttttaaactgtctttgttgtcagttttcttatgtctagctgtttatattccagtttatgtttaagcaacctccaacccagaagttctattcctacacacggagtagtattcttgtatgcttctgaagtacttaaattgtaacacgaagatgcattctttcttttgaaacacttctgttatatattttttgaatctatcctttttgaaattggttttcaattgttatgagttaaccatggctatggatttcttttggaagcgtttggtggccttgatgtcttttactaatttatagaattatttacagcacgagtatacctgcagttttgcttctatatggctgtgttatgcatatgaggactttgcatttcagtgccagcactacttactatgtccctatatcccttattatttaatattttgattgggcttagcatatgatgatcttactcggattccccttcaggacatcaaattggatgatgcaaattcgagtttccgatgcgctgtgcctccattatttcattcccttctctttgcattttatgagtattctgtacatcatatttggattgtgctagcaatttgccatatgcttggttgtttatactctctttagtatggtacaaccttcagcgatatgtgtgctttgttggtggctaatagtcatgtttttgactttttgcatattaattttcttgatattgtcttgttcttttttctgtaatatgtcagctttcctggtatagctttctctcctattgttattttgttagtctagtgctaattagaactattccagtacttgccgtactacatttcttaattctgtggcagtgtcggacattgatatgtttttgccttgtaacattgcttacaataattcatgtatgtttgctgctagagtctcggataaattgtctgcatataaaattccctttatggaatcttcttccatggccatgtcctttgttgaagatcttgaagattctcactgatttttgaaacctttcctatggaatcctctgtcctgcaggctaggatcttagccctcaatgcatcctacttcctgaagaatggtggacattttgtcatttcaatcaaggtacttttgtcttttctctcccctgaatcctgaagataatcaccttgattgaggttgagattggggagatattagatgtaatactaggtattggactgaaattgtttgaacaggcgaattgtatcgactccaccatgccagctgaggctgtgtttgctagtgaagttgagaagctgaaggcagatcagttcaagccctctgagcaggtgacgctggagcctttcgagcgtgaccatgcctgcgtcgttggtggttacaggatgcccaagaagcaaaagggtacatcttaagaagaataaaacttgtggttgtgagtgactggtgctaaaatgtagtgctgcacaaaacttttggtctaattgtttttcacttgcaccctggtttgtaaggctgaaatttttggacaaatgatgctaggagagaagtaaaaagtcactcaggttttgcact</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0176000, RefSeq:Os05g0176000