Os04g0388900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0388900 |
|---|---|
| Description |
Similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F) |
| Version |
NM_001059169.1 GI:115458067 GeneID:4335668 |
| Length |
5210 bp |
| Definition |
Oryza sativa Japonica Group Os04g0388900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
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| Chromosome | |
| Location |
Chromosome 4:19155340..19160549 |
| Sequence Coding Region |
19155539..19155585,19155719..19155832,19160362..19160494 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:19155340..19160549 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:19155340..19160549 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcaccggcggcggcgcggacaagtccggcggcggcggcggaggggcggtgaagacgccctcggacttcctcaagtcgatcaggggacgccccgtcgtcgtcaagctcaactccggcgtcgactaccgaggtattttggcttgcctggatgggtatatgaacattgcaatggagcaaacggaagagtatgtgaatggccaactcaagaacaagtatggtgatgccttcataagaggcaacaatgttctatacatcagcacttcgaagaggacccttacggatgacgcatag</cdnaseq> |
| Protein Sequence |
<aaseq>MSTGGGADKSGGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDDA</aaseq> |
| Gene Sequence |
<dnaseqindica>4965..5011#4718..4831#56..188#ctctctctttctcacccaaccccaactctacacgcacgcggcgacagcgagagagatgagcaccggcggcggcgcggacaagtccggcggcggcggcggaggggcggtgaagacgccctcggacttcctcaagtcgatcaggggacgccccgtcgtcgtcaagctcaactccggcgtcgactaccgaggtgagggtctctctcccctctacagtctacaccgctaaaccagaagaaccctaagcacccgcgtttactccctctcagatatactataatctgtctcctgaaacttagaggctttctggttagtttcccccacttttggggagttttaggtgcgctaaattgtgactcattactagatccccatcataaaaaagagaagaaaatttattagagatttaatgtgccaaccatggccttcttgttctaaaaatatcgtctacttattcgatgtttaagagattttagtgtcaactatggtcttcggaaacacaagagcatgattccgatgcgaatcgttgcttcttttgtgcttcaaagccttcagccctcagtgcttcgatttaggtctcccccaacatctctgagtcgcagacatgtcgaattgggcaacgatatttttcgaagcacattttaattgcgcaaggtttatatgaagagaaaattggtattatgccgctgagagattccaagtttaaaaaattctgtcagctcacttaaccccacgaaagcttccccagtttcagtcacccttacccaatctaccacttcagcagatgttaacagtggcaatcttggccttccttttctcgttgtgtcaccaagtgcattcttctagttgccgcgctcaggctcaaacaccaattgggattactaggctaatagctggtcattcatcggcttgcgttagggatgagcagataagaagggggagagtgatgaaggatgccataaagaactggaatttcactcagaaaatgcatatagttagcacgcgaattgtgaagttttaagttgtgtagtgacttttgctcatacttaaatgtctgactgcacaaatttgttttactacatactccgtatactacttgaaatgtcaaatgtgtaattctgttacactaaacgttcatggagccataggcaggatcacttctgtggggaccatccacatgtgaggagctaatcccaaccatctatttagctgacaatgtgttacatagatggctggtaactaagtcctcacgtgggcatagtctccatatatgtttcatcctgctgcttagtatgtcaagcattgttcatagcaagaatttccactctcatcctattttatttaaataaacaatcaataagctttcgatgtataccataaggatatgtttagaatgtagaaatttggcaggtagttgtttcccacactccaaatgcggcccaaacttgtggtagaagggagattaatcttcttatcatcctgtccaattcccattgttttgcaagccccatacatatgcaaaaagcatggacacctcaaattgatgaaatagagtagtggagtatatccttgttctttttagcccatttaacattgacacgtggaaccatgaattttcattttacaaagtgatgtaccagaatttcattgcaatcttatttattagattaacaatggacttatgatcaaatatatcggatatctcaattttatgaaaattttccaattcactgttgcaatataactgtaataatggttgctacaaaggagagcacagctttagacattgtcaaatggtgtgcacttttggaagcagtgtgttatctttgatcagtcaccaggttgcatttcttcattcagttctttgacagtagactatatctgggtgtagcatggagtgtttgtatttgttgatggcatttatgcaaagctgtcaagtccttgtttttaataaagaagcattatctgtcattagactgcagtactgtaacatttattcgttcacgtgaatttaatagtcgatatttaaaacagagatgaaataccttatttatccaactttttccttgcctcacaatagtctgtgtgataactctttgcatgtcaacatacattgttactccatatcttttgcacagtcatactgcaagaatgcatcacattctgtttctctgatggatactctgcataagttaggaataatacataaaagttgtgtcttattgttatttgatgaacatcgcttattcttttcatcttctgctgtgtacactaaaatatcatagtagataaattaaaatgcctctggcttcggcgccgttcttcatcaaggctccggaccggtggcgttcttcagcaagccgatagcgccacgccacgctaagctcgccgcctatgagcgtgaactgattggacttgtccaagcagttcgccattggcggccatacttatgggggtgccggttcctcatccgcaccgaccattacagtctgcgcttccttctggaccaacgtctatccaccgttccatagcaccaatgggcaagcaagctactcggcttcgactttgcagttgagtacaagccgggaacaacaaacgtggtggcagacgccctctccagaagggacgaacacctggctgaagctctcgccttgtcagcccctcagttctctctgtttgatgagctgcggcacgaggtgctcacgtcgcccgagctgactgccattcgggatgacattgccaaggggtcaaaaccgccggcctgggcgttcacggacggcctcatcacgttcaaaggccgtatctttgtgtctgcatcatcaccatccttgccggccatcctcgaactggcacacggcctggggcacgagggcacgcagaatacgctctctcgcctccgagctgacttccacctcgcacgggacagggcggtggtacaagagcatgcccgagcctgtttcacgtgtcagcaaaacaagacggagcacctacaaccggccggcctcttgcaatccttgccggtgccatcggcggtgtgggctgacatcgccatggattttgtggagggtctgccacgcgtccatggcaagacggtcatcttaacggtggtggaccgtttctccaagtttgcccactttataccaatggctcatccctacacggcaacctcggtggcagcggccttcttctcggaaattgttcgtctgcatggtgttccagcttctattgtcagtgatcgagatccggtcttcaccagcactttctggcgggagttgttcagattggccggagtacgactgaacttgtcgtcggcatttcatcctcagtctgacggtcagtccgaggtgacgaacaagatcattgcgatgtatctccgttgtcttaccggcgatcggccgcggcactggctacggtggcttccatgggcagagtactgctacaacacgtcctaccagtcatctcttcgcacgtcgccgttccgtgtggtttatggccgtgagccgcctacgctgcgcgcctatgaaccgggatccactcgtctgctggcagtccaacaggcgatgcaagatcgagatgaatttttgcgtgagattcgtgatcgcctggagcaagcgcagcagacacacaagtcggcgtatgatggcaagcatcgggcattggaattcagtgtgggcgactggttgtggcttcgtttgctccatcgcccgattgcttcgctcggggtcaccggccgtggtaagttggggcctaaattttacgggctgtacagggttgccgagcggattggttctgtggcatatcgtcttcagcttcctccgggtgctcgcttgcatgatgtgtttcacgtgaggttgttgaagccattttgtggaactccgccggattctgttccaccgttaccgcccattcaacacggccaagtgtgtttgcagcctgctgcagttacgcagagtcgattggctcgtggagttcgtcaagttcttgttcagtggaaggataagccttctgccgaagcttcatggatgcctttggatgaatttcgcactcttcatccggattttcagctcgaggacgagctgcttctccaggggggagagatgtcatgtggggattgcaatacaagcgtcgcagcaacaggcgggcgacggcaaggcgtgacgaggaatagttttttacttctgttttgattcggttcagagtttgttagatagtttgttagtttcttattccgtaagttgttaggagtctatcctttagaattgctatataatctgtaagacagtttggttttggaatcaatcaattacgtgagattaatctgcagacctattcctgcctcgccggtgcggtgccgaacacggctcctccgcgccgacgaggtccaggaccgcgtcctgttacagccttcaaatactccctccgccgtaatcctccttccaatctccttgctcgtgacaagctcatgttggcactctattttacgttgaactcattttattctctccatcctagtggttagcttagcttggttgtgttcatttgatggtaactcatgcacacaatcattgtatgtttctaattatcaaatgctgtgctcagaaaggaaaatagtatgacttgacaagtgatacggagttacggacaatgtcttagttctttttgtaagttatgtacgaatattaccaattttcttctgaccattatttttcctgataatcaggtattttggcttgcctggatgggtatatgaacattgcaatggagcaaacggaagagtatgtgaatggccaactcaagaacaagtatggtgatgccttcataagaggcaacaatggtatgtcctggacttaaagttaaaaccccagttttccctgtctggtttgcctgcctgtgatatttgtagaatttaatcatattatctgcctcaaccgtctattctgattttcatgctcgttctctgaatgcagttctatacatcagcacttcgaagaggacccttacggatgacgcatagatcgagtggaacagagtcgactctttttaacttcaaaatcgttaagctgattggttgtgatctctctctgacccatgctcgtacctgctgttttgaggtgggaaaatgtattgcatattgctagacttatcagaaacttctttaatgtaactgtatcagctttgcaaagaacttccggccaagatctccagttgcattt</dnaseqindica> 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