Os05g0176500

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0176500| Description = ATP10 family protein| Version = NM_001061325.1 GI:115462380 GeneID:4337960| Length = 3801 bp| Definition = Oryza sa...")
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Gene Name

Os05g0176500

Description

ATP10 family protein

Version

NM_001061325.1 GI:115462380 GeneID:4337960

Length

3801 bp

Definition

Oryza sativa Japonica Group Os05g0176500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4564584..4568384

Sequence Coding Region

4564785..4564902,4565043..4565203,4565975..4566046,4567530..4567763,4567894..4567957
,4568071..4568120,4568223..4568330

Expression

GEO Profiles:Os05g0176500

Genome Context

<gbrowseImage1> name=NC_008398:4564584..4568384 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4564584..4568384 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagggcacggtgggcggcggggatgctgcgccgcgctagctctggcgaggcttcgctcgccgcgcgcgcggtcttcgcgcgcggcttcctcggcctcaacatgaaggcgagtaaggagaccatcgagaagaaggagaaggataaggccaggcttatggatgaaatgagcagggggtacttcgccgacatcgcagagatacgcaagaacggcggcaagcttgcgacagcgaataagatcatcattccggaaatcgcagccgtgaagttccctgatctttctgtgaagtcccctgatggcaggacagtgaatttgccgcttgtcgcacctccgcgaaacgatgatccccagactggcaatacagtggacacacaaaatgatgattgtaaggctggtgatatggtggttcctgatgcttcattggtgtgcctttcctttcgcgcaagctcccagaaaatggcagaaacgtggagcctaccttttcttgatgcatttagttctgctgggaatattcaagtgtatgaggtctcatttattgattcatggctgttatcatcaagtcctgtgagacaagtattcctcaaggtgatgacaaaatccaacaatccacagagacatgctgtatatgcctttggtgaccactattatttcaggaagaagcttcatatccttaaccttcttactgggtacatatacctggttgatcgcctcggaagagtgaggtggcaaggtttcggatctgcgacgcaggaagagttgtcatcgctaactgcatgtacctccattttgttagatggaaaatga</cdnaseq>

Protein Sequence

<aaseq>MMRARWAAGMLRRASSGEASLAARAVFARGFLGLNMKASKETIE KKEKDKARLMDEMSRGYFADIAEIRKNGGKLATANKIIIPEIAAVKFPDLSVKSPDGR TVNLPLVAPPRNDDPQTGNTVDTQNDDCKAGDMVVPDASLVCLSFRASSQKMAETWSL PFLDAFSSAGNIQVYEVSFIDSWLLSSSPVRQVFLKVMTKSNNPQRHAVYAFGDHYYF RKKLHILNLLTGYIYLVDRLGRVRWQGFGSATQEELSSLTACTSILLDGK</aaseq>

Gene Sequence

<dnaseqindica>3483..3600#3182..3342#2339..2410#622..855#428..491#265..314#55..162#actactactactccgtcctcctcttcaccggttagatcggcggcggcggcggcgatgatgagggcacggtgggcggcggggatgctgcgccgcgctagctctggcgaggcttcgctcgccgcgcgcgcggtcttcgcgcgcggcttcctcggcctcaacatggttcgtatggcctctctggtgtctcatcctctacttgcttctctctgcagcggcggctgatgggttggggtggttgtgttttttttttttggtggtgggtagaaggcgagtaaggagaccatcgagaagaaggagaaggataaggccaggctgtaaggctacttccactacctttggcaatcggggctagtactgcatggaatttttggagcaaatgtgtgaattgtgatgtttaagatctctcttaactgttgttctagtgcagtatggatgaaatgagcagggggtacttcgccgacatcgcagagatacgcaagaacggcggcaaggtgtgcatatgttgtcgtaaagattattctgtttcactgtgtttatgttgcaatgctgggtagagatgtccgtcatctttagctgctgatgaggtttaatcaactcttcgttgtggcgtggattgtgcagcttgcgacagcgaataagatcatcattccggaaatcgcagccgtgaagttccctgatctttctgtgaagtcccctgatggcaggacagtgaatttgccgcttgtcgcacctccgcgaaacgatgatccccagactggcaatacagtggacacacaaaatgatgattgtaaggctggtgatatggtggttcctgatgcttcattggtgtgcctttcctttcgcgcaagctcccaggtatggtgaattatatcttcatttacggatttcccatctgtatatcagatatctgttcccatcgttgtcgtatatggcttgcttgcactttttgatacacgcttcatggcttacgaggttgtgcttttcagtcatacagtacttgctagacacccacattatgattcaacgagatgtacttatatctttactaaagtcaggagttaatgaatagcttgtttaattgtctttccatttttgtaagcacttggactagtgtatgtcttgaatgtgtaccaatgggtttgtacagaaataatctttgttttgcctcttaatgtttgtcatttctcatgaacattttacctactgaaatttaaagctcctggtttagatggttgtatttcgtaattttaatagtgttcctcaaaaaaaaaattttgaatattgcacagctgctgttagagcagcctctagattttaaaaagaaaagagcaacacttggttgggtttgttaaatgcatattttctcttagcaaatttaagatcaacctgtagttaacatctcacaatgagataatccaagaaatgccattgataagcgtccaaatcccagaaatgccatcgacaagtgtgagttccaagaaatgccatcgtacaaacgactttgtcccaaaaatgctatcgccgttagggttccatccattttgcgccgttaagttctataggatgaacagtgtatttaacggtgtaaaatggacggaaccctaacggcgatggcatttttgggacaaagtcgtttgtacgatggcatttcttggaactcacacttgtcgatggcatttctgggacttggacgcttgtcaatggcatttcttggattatctctttcacaatagcttcgctaacttgagccaagccttgctataacaaaaatgatgtcatttctggttctcttacccacttaaattggcaaactagatcaagctataatgtttccgtttctcttgttgtctatgctcagtttttttctctcttctgcataaggttcatcccccccccccaaaaaaaaaaggaaaaaaaaggactcctctaaaacagacatgaaaaactctgaaattatttttgtaacatgcgctgtgacgccgtccgtcatcccacaacattttgattaaagtgaaaacctgataattagaaaagaagacaaaattcattagcaaagtagtgacctggtataatagttcgttgagcaaagtggatgaaaaataatcaggggattaattactccagcgaaatagtttatggaattaaattaactattactatctggttctaaaaggacaaatgcatcaagcattccaatggataactacaactacgcatgttcaaccaactgggttttatgctattttcatacatgccaattccattcttgttgatcttttgtttgattttttatacactcagttgttctatggctaactagattcctcctgttcaacagaaaatggcagaaacgtggagcctaccttttcttgatgcatttagttctgctgggaatattcaagtgtatgaggtatttgaacataatttgggttatcagctgtgaactgccttatgccataagtccatgcgaatcaccactgagaaaaggaggaacataattagttaaatgatgtttgacatgtcctacaatattacataagtacataaacctgatagttatagattagagaaataaacagaacagattgtatctgcttctatgtttagctctcctctccatttcacttggatgatctcgggttgcaaatatactatagtgccataatgtgtagtttttgttactccctctgtttcagattacttgtcattctagctttatcctaagtcaaacatttctatctttgaccatcaaatttctagaaattcgtatagtttagcatgtgaattatatattagaaagtatttctcatgatgaatctaaaaatagaaatcctatgatattatactatatgaatttctagaaattgatggccaaagatataaatgtttgacttaggacaaactaaccagtagtttgaggcggagggagtattacgagttcattttttatgcaattcaaatattcaatctatgcccatgtttacactttacaattaattcgtgttaactgtcaacacaaaaggaaccctgtactaatattgtaatttgtgatggaataccacgacaagccgaccatgctaatacttggcaattttaaatttagaacttttgatattgctgaggaaatttatgtacattacacatggctgcaactgaaagggaaaaaaaaactatggttcaggtctcatttattgattcatggctgttatcatcaagtcctgtgagacaagtattcctcaaggtgatgacaaaatccaacaatccacagagacatgctgtatatgcctttggtgaccactattatttcaggaagaagcttcatatccttaaccttcttactgggtaatgtttcttccttcccgttgttcgtttggcaaactttagatgtaaaggtcctggttaccacatactgggcgatgtttcctccttcccttcgtttatatgttttgttctctccctttgttcaaactcttctactgcaggtacatatacctggttgatcgcctcggaagagtgaggtggcaaggtttcggatctgcgacgcaggaagagttgtcatcgctaactgcatgtacctccattttgttagatggaaaatgagatttagatggatactgaaatatttggggttggagaaattttgtcattgcgaatccatagctgtatcacctctcgtttcagcatattgagggatgattttttttcctcgcggttaataagcgtaaattggattgattttctcctgcccaatgacattgtgtaaacagcattgcttgcatgtcattgttattctgggaactc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0176500, RefSeq:Os05g0176500