Os04g0398300

From RiceWiki
Revision as of 19:52, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0398300

Description

Similar to Glycyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.14) (Glycine--tRNA ligase) (GlyRS)

Version

NM_001059205.1 GI:115458139 GeneID:4335708

Length

2406 bp

Definition

Oryza sativa Japonica Group Os04g0398300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19700469..19702874

Sequence Coding Region

19700471..19700551,19701034..19701093,19701231..19701311,19701398..19701803,19702450..19702700

Expression

GEO Profiles:Os04g0398300

Genome Context

<gbrowseImage1> name=NC_008397:19700469..19702874 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19700469..19702874 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcagagattgaatgctcttttgggtggattgagtgtgttgggattgctgataggtctgcatatgatctgcgtgctcactcggataaaagtggtgttgcacttgaagcacatgaaaagtttgcagagcctagagaagtggagaagttagttataaccccgtcaaagaaggaactaggtcttgcgttcaaagggaatcaaaggatggttcttgaagcattggaggcaatgagcgagactgaagctttgaatatgaaatcagctttagaatccaaaggggaggttgaatttaaggtgtgtacacttgggaaagatgtcaccataaagaaaagcatggtttcaattaacatggagaagaaaaaggaacatcaaaggaaatttactccttctgtcatagagccatcctttggcatagggagaatcatttactgtctgttcgaacattgcttctatcaaagacctggcaaggcggaggatgagcagttgaatgtattcggtttcccccctcttgttgctcccatcaagtgcactgtctttccacttgtcaagatcgaaaaatttgaagttgttgccaagaaaatttcgaaagcattgacagcagcagggatttctcacataattgatatgacaggtaacacaatcggtaagcgttatgcaaggaccgatgaaatcggtgtccccctggcaatcacggttgacaacaccacgagtgtgactgtccgtgaccgggacagcaaggatcagatccgcgttgaggtcgatgaggtggcctcagtggtgaaggaagtgacggacgggcagagcacctgggcagacatcatgtggaggtacccggcacatactgcctcggccgctgaagaggaggaagcatcagaaacctga</cdnaseq>

Protein Sequence

<aaseq>AEIECSFGWIECVGIADRSAYDLRAHSDKSGVALEAHEKFAEPR EVEKLVITPSKKELGLAFKGNQRMVLEALEAMSETEALNMKSALESKGEVEFKVCTLG KDVTIKKSMVSINMEKKKEHQRKFTPSVIEPSFGIGRIIYCLFEHCFYQRPGKAEDEQ LNVFGFPPLVAPIKCTVFPLVKIEKFEVVAKKISKALTAAGISHIIDMTGNTIGKRYA RTDEIGVPLAITVDNTTSVTVRDRDSKDQIRVEVDEVASVVKEVTDGQSTWADIMWRY PAHTASAAEEEEASET</aaseq>

Gene Sequence

<dnaseqindica>3..83#566..625#763..843#930..1335#1982..2232#atgcagagattgaatgctcttttgggtggattgagtgtgttgggattgctgataggtctgcatatgatctgcgtgctcactcggtatgcattacctatcattaaatgcttacgctcacttgggggacttgctgggagtttgctcattataatcaaatatatgtcccttccaaactaaatgtcttggtgaaaatgaaattacaagagctatctactgagcttgatagcagaacttctttctaaaaactcacttttgtgaaatatacattgtgccacctttcgtcgttaaacagattccagtttttttttaacatgctttattaactcaactgctattcatttgtcccgcactattttttttaatatattcttctgcaaggccctatttgtatgggcctctttccttgcctatccatgtgtataagccaggaattatgatctaaaattctggcgcatacacatggatgagcctggattacggtccatccaaacaaggcctgaagtgttttttttgcacataaccataatggagttattcatatattatatttgtcaatattgaccaggataaaagtggtgttgcacttgaagcacatgaaaagtttgcagagcctagagaagtggaggtgagatcaacatttttctaagtttacaactgtactctgttaattgaataaatagaactatgctctttctactatattatttgatcaccttcctgaattatatgctttgctaataacttcttttttgacacattcagaagttagttataaccccgtcaaagaaggaactaggtcttgcgttcaaagggaatcaaaggatggttcttgaagcattggaggtaagtttcatatccatattgaccagctacatgcctatattgtattgctgttttgttaatcagccacctactttctctgcttgcaggcaatgagcgagactgaagctttgaatatgaaatcagctttagaatccaaaggggaggttgaatttaaggtgtgtacacttgggaaagatgtcaccataaagaaaagcatggtttcaattaacatggagaagaaaaaggaacatcaaaggaaatttactccttctgtcatagagccatcctttggcatagggagaatcatttactgtctgttcgaacattgcttctatcaaagacctggcaaggcggaggatgagcagttgaatgtattcggtttcccccctcttgttgctcccatcaagtgcactgtctttccacttgtcaagatcgaaaaatttgaagttgttgccaagaaaatttcgaaagcattgacagcagcagggatttctcacataattgatatgacaggtacactattgaactatgtgaagcatatagcatttattgtgtttgatttcaattctaatcatatgaagcagtgtaatttgcataagaaagccttttccccttgttttgttttttataaatttctgtgttttgcttaactttatttggattttcataagttttcatgcattatttaacttctagagaaggggaatagcccttatgttttgtcagatggctgttaaattatttctacttggtggcttacataggtccaaattatcacctttaaaaatggctacccatttaattcaaatgccaatatttaaccagattgatggcatctacacaaaaactattgaaacttcagtccagttatctgccatggtgaaacttgattgctgtacactttcaactgattgttttgtggaaggagtatgctatgtgcctggctgttttcctttcgaaatactttcattgaattaatcataaaatgaattcagctcttcaaaaatataaaatttctaactatatatgtatgatctatggtactacgcaaaccttgtaaatactaaatagttgtgcaaaacaattgtcagagcatgggaaatgtggtcctgttcactatgttttagcaaacctgtcatttctggcatggttgttgcaggtaacacaatcggtaagcgttatgcaaggaccgatgaaatcggtgtccccctggcaatcacggttgacaacaccacgagtgtgactgtccgtgaccgggacagcaaggatcagatccgcgttgaggtcgatgaggtggcctcagtggtgaaggaagtgacggacgggcagagcacctgggcagacatcatgtggaggtacccggcacatactgcctcggccgctgaagaggaggaagcatcagaaacctgaagggggcaagcagtgcagtgcaagccaaaacctctggctggaattgagatggttgttgccatcctgcttttctgatacatgttttaacagaatgctaatgcagcattgagcattgttctgtaatctcgatgatttctctacatatttacagatgattttctcctgtttactgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0398300, RefSeq:Os04g0398300