Os04g0401400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0401400 |
|---|---|
| Description |
Sigma factor, regions 3 and 4 domain containing protein |
| Version |
NM_001059223.1 GI:115458175 GeneID:4335728 |
| Length |
1938 bp |
| Definition |
Oryza sativa Japonica Group Os04g0401400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:19886419..19888356 |
| Sequence Coding Region |
19886780..19886958,19887043..19887268,19887356..19887736 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:19886419..19888356 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:19886419..19888356 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggttgaaagggataggataagaattgagtatctagaaacgaaaatttggaggaatgatacaacttgtattgatatgcttagacttagaagaggaagtttttttcgtttttgtaagctgtttagggattgtggtttacttgaagataccatccacatgtgtattgaggaacaagttgctatgtttctgcatacggtggggcataaccttagaaataggttagtccgcactaattatgataggtctggagaaacagtaagtcgttatttcaacaaagtccttcatgcaattggtgagctacgagatgaacttatcagacccccctcattggacactccaactaaaatagcaggaaatcctagatgggatccttactttaaggattgtattggagctattgatggcacacatattagagcctctattcgtaagaatgtggagtcttcttttcgtggtaggaagtcccatgccacacaaaatgtaatggcggccgtagattttgatcttcggtttacttatgtcctggctggttgggaggggacaacacatgatgctgtagttttaagagatgctttggaacgtgaaaatggccttcatgtcccacaaggaaaattctatctagttgatgctggatatggagccaaacaaggattcttgcctccttttcgtgctgtccggtaccacttgaaagagtgggggaataatccggtgcaaaatgagaaggagttgttcaaccttagacactcatccctccgtatacggttgaacgtgcatttgggtcactaa</cdnaseq> |
| Protein Sequence |
<aaseq>MVERDRIRIEYLETKIWRNDTTCIDMLRLRRGSFFRFCKLFRDC GLLEDTIHMCIEEQVAMFLHTVGHNLRNRLVRTNYDRSGETVSRYFNKVLHAIGELRD ELIRPPSLDTPTKIAGNPRWDPYFKDCIGAIDGTHIRASIRKNVESSFRGRKSHATQN VMAAVDFDLRFTYVLAGWEGTTHDAVVLRDALERENGLHVPQGKFYLVDAGYGAKQGF LPPFRAVRYHLKEWGNNPVQNEKELFNLRHSSLRIRLNVHLGH</aaseq> |
| Gene Sequence |
<dnaseqindica>1399..1577#1089..1314#621..1001#ctgttttctcctcctcacgataacctctagggttagggttagtggcggcggcggaagcgcacaaggcggcggcgcgagctgggggcaaggcggcgcctcacgagcagggcgaggcggcggcgtggcctgaggcggcgcgctaccagggcgacgcagcggcgtggccaaggcgactcggcggcgcgaggagggcgaggcggctgcgcgagctggggctagccggcggcgcgagctgggcaaagcggcggcacgagaaggcctcatcctctccatccctacccacaaactgcagagctcggtttccattgttcaaggtaaaaaaatcctcatcctctccatccctacactgaatggggattttgtttacagatctgtgcatgtctgttgttcaagaatgttgtagtataattagttcaataatgttatttttttaggtaaacttattgacagtagatgatggtcatgtgttatttttgttgttgtattgtagatggataagaggaccaagcttttagtttgtattgctgctacaaatttattgttatcaatgatggccatgattattcggtctagaaaaaagaacgagaggttcaaggagagaaggtattagatatggcccaatggttgaaagggataggataagaattgagtatctagaaacgaaaatttggaggaatgatacaacttgtattgatatgcttagacttagaagaggaagtttttttcgtttttgtaagctgtttagggattgtggtttacttgaagataccatccacatgtgtattgaggaacaagttgctatgtttctgcatacggtggggcataaccttagaaataggttagtccgcactaattatgataggtctggagaaacagtaagtcgttatttcaacaaagtccttcatgcaattggtgagctacgagatgaacttatcagacccccctcattggacactccaactaaaatagcaggaaatcctagatgggatccttactttaaggtgtgagattcatccctatctcattttatatttatgtgagcatcgatatattgtccctaatctttaatgttgttgaacaaaaaataggattgtattggagctattgatggcacacatattagagcctctattcgtaagaatgtggagtcttcttttcgtggtaggaagtcccatgccacacaaaatgtaatggcggccgtagattttgatcttcggtttacttatgtcctggctggttgggaggggacaacacatgatgctgtagttttaagagatgctttggaacgtgaaaatggccttcatgtcccacaaggtaataaattactatagtttatcaaattctccatgacaaatgttgatatttaggaatgtgaccaacttatcgatcatatgataggaaaattctatctagttgatgctggatatggagccaaacaaggattcttgcctccttttcgtgctgtccggtaccacttgaaagagtgggggaataatccggtgcaaaatgagaaggagttgttcaaccttagacactcatccctccgtatacggttgaacgtgcatttgggtcactaaagaggaggttcaaagttctagatgatgccactccattcttcccatttcgaactcaagtagatattgttgtaacttgttgtattattcataactgggtcataaatgacggaattgatgagcttatagctccatctgattggacaagtgaggacattgatgaatcgtcaaccggccaagcgaatgaccatgcattgatggtttagtttaggcagggtttagctgatcagatgtgggctgaccgtaataaccatcatggagtgtaatatgtagccatgcaacttgtatttctaccttatttgctacatttcatttgtattatgaacttcttttatttatttaattcgtgtggacagcttgttgt</dnaseqindica> |
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